Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9h15
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 45 2e-04
U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2 p... 44 6e-04
BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 6e-04
AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 6e-04
AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase D... 44 6e-04
AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform pro... 44 6e-04
AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform pro... 44 6e-04
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 40 0.009
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 40 0.009
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 40 0.009
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 29 9.7
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 29 9.7
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 29 9.7
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 29 9.7
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 29 9.7
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 29 9.7
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 29 9.7
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 29 9.7
>AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 3 variant protein.
Length = 674
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = +3
Query: 120 SNMSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
S MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 11 SGMSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 58
>U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2
protein.
Length = 662
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase DDX3
protein.
Length = 662
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 39.5 bits (88), Expect = 0.009
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNR 46
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 39.5 bits (88), Expect = 0.009
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNK 46
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 39.5 bits (88), Expect = 0.009
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 126 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 245
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNK 46
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.7
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 114 LGSNMSNVTNQNG--TGLEQQLAGLDLQP-QAPKS-TGRYIPPHLRRQLQATSDQGEESK 281
LG + Q G TG +++L G +L+P QA ++ TG+Y+PP LR + + ++
Sbjct: 175 LGPMQKELAEQLGLSTGEKEKLPG-ELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNR 233
Query: 282 RS 287
R+
Sbjct: 234 RA 235
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,848,205
Number of Sequences: 237096
Number of extensions: 1610005
Number of successful extensions: 4116
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4106
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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