Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9h15
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83235-2|CAB05773.2|  265|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF456248-1|AAL59606.1|  265|Caenorhabditis elegans secreted 2-im...    28   4.5  
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z66496-3|CAA91279.2|  570|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st...    27   7.9  
L16559-5|AAA27932.2|  365|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AC024821-5|AAF60784.1|  337|Caenorhabditis elegans Hypothetical ...    27   7.9  

>Z83235-2|CAB05773.2|  265|Caenorhabditis elegans Hypothetical
           protein K10C3.3 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 475 NQSVGMNPRNGMIVNANGTDAGLATCD 555
           +QSV M     ++ NAN TDAG  +C+
Sbjct: 177 SQSVSMEGSTVIVTNANYTDAGTYSCE 203


>AF456248-1|AAL59606.1|  265|Caenorhabditis elegans secreted
           2-immunoglobulin-domainprotein ZIG-1 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 475 NQSVGMNPRNGMIVNANGTDAGLATCD 555
           +QSV M     ++ NAN TDAG  +C+
Sbjct: 177 SQSVSMEGSTVIVTNANYTDAGTYSCE 203


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 193 GCKSRPASCCSRPVPFWLVTL 131
           GC+ +P +CC+ P P  L T+
Sbjct: 637 GCQPQPQNCCAPPAPCCLPTI 657


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 193 GCKSRPASCCSRPVPFWLVTL 131
           GC+ +P +CC+ P P  L T+
Sbjct: 282 GCQPQPQNCCAPPAPCCLPTI 302


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 193 GCKSRPASCCSRPVPFWLVTL 131
           GC+ +P +CC+ P P  L T+
Sbjct: 234 GCQPQPQNCCAPPAPCCLPTI 254


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 193  GCKSRPASCCSRPVPFWLVTL 131
            GC+ +P +CC+ P P  L T+
Sbjct: 962  GCQPQPQNCCAPPAPCCLPTI 982


>Z66496-3|CAA91279.2|  570|Caenorhabditis elegans Hypothetical
           protein E04D5.1a protein.
          Length = 570

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 198 APKSTGRYIPPHLRRQLQATSDQGEES 278
           A +  G YIPPHLR+ L      G  S
Sbjct: 459 AVRQAGAYIPPHLRKPLGGGGSAGPPS 485


>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
           protein F40F11.2b protein.
          Length = 1607

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +3

Query: 81  FLEQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATS 260
           ++ Q    N P G++ S + +Q G  + Q    +  QP  PK+T +  PP  +   QA  
Sbjct: 170 YMPQIDHMN-PSGNSSSQINHQQGMIVPQ----VQQQPAKPKTTKKRPPPKKKTAAQAPD 224

Query: 261 DQG 269
             G
Sbjct: 225 TVG 227


>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
           protein F40F11.2a protein.
          Length = 1593

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +3

Query: 81  FLEQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATS 260
           ++ Q    N P G++ S + +Q G  + Q    +  QP  PK+T +  PP  +   QA  
Sbjct: 156 YMPQIDHMN-PSGNSSSQINHQQGMIVPQ----VQQQPAKPKTTKKRPPPKKKTAAQAPD 210

Query: 261 DQG 269
             G
Sbjct: 211 TVG 213


>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
            structural genes (yolk protein genes) protein 1 protein.
          Length = 1616

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 546  REARVGPVRVHDHSISRIHS 487
            +EAR G V++ DH IS +HS
Sbjct: 1587 KEARQGTVQLDDHKISFVHS 1606


>L16559-5|AAA27932.2|  365|Caenorhabditis elegans Hypothetical
           protein C06E1.7 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 130 LILLPSGTFFWELCSKNI*NTVYNEFCTNTNSQNHKK 20
           LI  PS TF W L   +    VY +   +TN  N+KK
Sbjct: 301 LITAPSSTFGWWLGYLSKGQAVYYQDIRSTNDVNYKK 337


>AC024821-5|AAF60784.1|  337|Caenorhabditis elegans Hypothetical
           protein Y55B1AR.4 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = +3

Query: 204 KSTG---RYIPPHLRRQLQATSDQGEESKRSSLDT 299
           K+TG   +Y+PPHLR + ++ + + ++    + DT
Sbjct: 54  KATGNAPKYLPPHLRNRQESENKEEDDESECNSDT 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,170,318
Number of Sequences: 27780
Number of extensions: 232386
Number of successful extensions: 731
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)