Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9h14
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0333 + 20333243-20333329,20335048-20335110,20335276-203353... 293 7e-80
05_03_0407 + 13582595-13582681,13583067-13583129,13583289-135833... 292 2e-79
03_02_0544 - 9362615-9362674,9362783-9362857,9362934-9363144,936... 291 3e-79
07_01_1091 - 10015180-10015236,10015705-10015779,10015874-100161... 270 8e-73
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 60 2e-09
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022... 55 7e-08
01_05_0559 + 23281408-23282457,23282580-23282942,23283938-232839... 32 0.42
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 32 0.55
02_01_0206 + 1388149-1388330,1388527-1388629,1388896-1388964,138... 31 1.3
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 29 2.9
08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733... 29 2.9
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 3.9
08_01_1077 - 11027732-11027839,11028346-11028477,11029722-110298... 29 3.9
05_01_0098 - 659570-660388 29 5.1
02_04_0468 - 23172561-23174201 29 5.1
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 29 5.1
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 28 6.8
03_06_0165 - 32108697-32109788 28 6.8
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 28 9.0
>05_04_0333 +
20333243-20333329,20335048-20335110,20335276-20335359,
20335720-20335827,20335969-20336141,20337135-20337246,
20337468-20337548,20337635-20337697,20337779-20337880,
20338070-20338194,20338317-20338527,20338625-20338699,
20338990-20339043
Length = 445
Score = 293 bits (720), Expect = 7e-80
Identities = 140/231 (60%), Positives = 174/231 (75%), Gaps = 2/231 (0%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP- 231
MDEEYDVIVLGTGLKECILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGED 59
Query: 232 APDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 411
P G RD+NVD++PKF+MANG LV+ LIHT VT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 119
Query: 412 VDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDRN 591
EAL S LMG+FEKRR RNF IYVQD+ E D KT + D +T + L K+GL +
Sbjct: 120 ATDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDD 179
Query: 592 TQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSDSLAKY-GKSPYLYPLYG 741
T DF GHALAL+ DD YL +PAI T++R+KLY++SLA++ G SPY+YPLYG
Sbjct: 180 TVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYG 230
>05_03_0407 +
13582595-13582681,13583067-13583129,13583289-13583372,
13583757-13583864,13584018-13584190,13585190-13585301,
13585424-13585504,13585611-13585673,13585764-13585865,
13586063-13586187,13586316-13586526,13586614-13586688,
13586950-13587003
Length = 445
Score = 292 bits (717), Expect = 2e-79
Identities = 139/231 (60%), Positives = 174/231 (75%), Gaps = 2/231 (0%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP- 231
MDEEYDVIVLGTGLKECILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGED 59
Query: 232 APDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 411
P G +D+NVD++PKF+MANG LV+ LIHT VT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 KPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 119
Query: 412 VDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDRN 591
EAL S LMG+FEKRR RNF IYVQD+ E D KT + D +T + L K+GL +
Sbjct: 120 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNEADPKTHQGLDLTTMTTRELIAKYGLSDD 179
Query: 592 TQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSDSLAKY-GKSPYLYPLYG 741
T DF GHALAL+ DD YL +PAI T++R+KLY++SLA++ G SPY+YPLYG
Sbjct: 180 TVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYG 230
>03_02_0544 -
9362615-9362674,9362783-9362857,9362934-9363144,
9363279-9363403,9363492-9363593,9363676-9363738,
9363817-9363897,9364248-9364359,9364454-9364626,
9364722-9364829,9364909-9364992,9365131-9365193,
9365652-9365738
Length = 447
Score = 291 bits (715), Expect = 3e-79
Identities = 138/232 (59%), Positives = 180/232 (77%), Gaps = 3/232 (1%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKF--NA 228
MDEEYDVIVLGTGLKECI+SG+LSV G KVLH+DRN YYGGES S+ L +L+ +F N
Sbjct: 1 MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLN-LTKLWKRFKGNE 59
Query: 229 PAPDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 408
AP E G +++NVD++PKF+MANG LV++LIHT VT+YL FK+++GS+VY GKI KV
Sbjct: 60 TAP-EHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLNFKAVDGSFVYNNGKIHKV 118
Query: 409 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDR 588
P EAL S+LMG+FEKRR R F IYVQD++E+D K+ + D + + K+GL+
Sbjct: 119 PATDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDLHKVTTREVISKYGLED 178
Query: 589 NTQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSDSLAKY-GKSPYLYPLYG 741
+T DF GHALAL+ DDNYL +PAI T++R+KLY++SLA++ G SPY+YPLYG
Sbjct: 179 DTVDFIGHALALHRDDNYLDEPAIDTVKRMKLYAESLARFQGGSPYIYPLYG 230
>07_01_1091 -
10015180-10015236,10015705-10015779,10015874-10016149,
10016204-10016332,10017070-10017171,10017626-10017688,
10017776-10017856,10018218-10018314,10019064-10019236,
10019327-10019434,10019706-10019789,10019985-10020047,
10020483-10020569
Length = 464
Score = 270 bits (662), Expect = 8e-73
Identities = 132/231 (57%), Positives = 168/231 (72%), Gaps = 2/231 (0%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 234
MD EYDVIVLGTGLKECILSG+LSV KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLN-LNQLWKRFKGEG 59
Query: 235 -PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 411
P G RD+NVD+IPKF+MANG LV++LIHTGVT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 TPPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVTKYLSFKAVDGSYVFNKGKIHKVP 119
Query: 412 VDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDRN 591
EAL S LMG+FEKRR F ++VQD++E D T K +D + + L K+GLD N
Sbjct: 120 STDMEALKSPLMGLFEKRRAGKFFLFVQDYKENDPSTHKGYDLNKMTTKELISKYGLDDN 179
Query: 592 TQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSDSLAKY-GKSPYLYPLYG 741
T DF GHA+AL+ +DNYL +PAI T LY++S+ ++ G SPY+YPLYG
Sbjct: 180 TIDFIGHAVALHKEDNYLTEPAIDT-----LYAESVGRFQGGSPYIYPLYG 225
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 60.1 bits (139), Expect = 2e-09
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 32/183 (17%)
Frame = +1
Query: 43 YTIIMDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKF 222
Y I +DV++ GTGL E +L+ + +GK VLH+D N +YG +S+ PL L +
Sbjct: 16 YPTIDPTSFDVVLCGTGLPESVLAAACAAAGKTVLHVDPNPFYGSLFSSL-PLPSLPSFL 74
Query: 223 N-------APAPD------------------ETYGR----GRDWNVDLI-PKFLMANGLL 312
+ AP+P ET G R + DL+ P+ L
Sbjct: 75 SPSPSDDPAPSPSPSSAAAVDLRRRSPYSEVETSGAVPEPSRRFTADLVGPRLLYCADEA 134
Query: 313 VKLLIHTGVTRYLEFKSIE-GSYVYKGGKISKVPVDQKEALASD-LMGMFEKRRFRNFLI 486
V LL+ +G + ++EFKS+E G+ +Y G + VP D ++A+ D + + EK F
Sbjct: 135 VDLLLRSGGSHHVEFKSVEGGTLLYWDGDLYPVP-DSRQAIFKDTTLQLREKNLLFRFFK 193
Query: 487 YVQ 495
VQ
Sbjct: 194 LVQ 196
>12_02_1229 +
27197464-27197481,27200438-27201583,27201935-27202201,
27202849-27202882,27202997-27203100,27203174-27203308,
27203367-27203511,27203864-27203880
Length = 621
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVL 147
MDEEYDVIVLGTGL ECILSG+LSV G K +
Sbjct: 449 MDEEYDVIVLGTGLMECILSGLLSVDGLKFI 479
>01_05_0559 +
23281408-23282457,23282580-23282942,23283938-23283991,
23284088-23284156
Length = 511
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 70 DVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG---GESASITPLEEL 210
++I++ TGLK CI + ++G VL + N G GE A + +E+L
Sbjct: 265 EIILMNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQL 314
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 64 EYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGES 183
EYD IV+G+G+ + + L+ G +VL +++ GG S
Sbjct: 68 EYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSS 107
>02_01_0206 +
1388149-1388330,1388527-1388629,1388896-1388964,
1389684-1389803,1390352-1390482,1390840-1390881,
1390961-1391138,1391241-1391319,1391441-1391610,
1392503-1392629,1392731-1392846,1392926-1393033,
1393118-1393180,1393283-1393456,1393814-1393978
Length = 608
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 ANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRN 477
A + KLL+ R +++ +V +GG+ S++PVD ++ S++ + RF+
Sbjct: 378 AKDFVKKLLVKNPRARLTAAQALSHPWVREGGEASEIPVD--ISVLSNMRQFVKYSRFKQ 435
Query: 478 FLI--YVQDFQEEDAKTWKD-FD 537
F + +EE+ KD FD
Sbjct: 436 FALRALASTLKEEELADLKDQFD 458
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 61 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPAPD 240
E YD IV+G G C L+ LS+ K +L YG + S +E + APD
Sbjct: 49 ETYDYIVVGGGTAGCPLAATLSLKYKVLLLERGGSPYGNRNVSY--MENFHIGLSNMAPD 106
>08_02_0456 -
17362080-17364156,17364853-17364942,17372615-17373318,
17373421-17373451,17374366-17374448,17374517-17374640,
17376427-17376560
Length = 1080
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 283 PKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPVD-QKEALASDLMGMFE 459
P+++ G + +H + ++ KSIE ++V G I VP+D QK+ L+ E
Sbjct: 597 PRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLG-IPNVPIDRQKKVRRLSLLVNTE 655
Query: 460 K---RRFRNFLIYVQDFQEEDAKTWKD 531
+ N + YV D +E+D+ +D
Sbjct: 656 EYYSSLEENNIKYVLDKKEDDSNEQED 682
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = +1
Query: 334 GVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEED 513
G+ LE ++ +++ G + + + + +A D + K+R RN L+YV+D +
Sbjct: 53 GIEHGLEL--VKQRIIWRVGNGDNIKIWRHKWVAHDDRLITLKKRVRNRLMYVKDLMDAG 110
Query: 514 AKTWKD 531
+++W +
Sbjct: 111 SRSWNE 116
>08_01_1077 -
11027732-11027839,11028346-11028477,11029722-11029802,
11029911-11030063,11030167-11030281,11030282-11030927,
11031409-11031613,11031696-11031758
Length = 500
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 514 AKTWKDFDPSTANMQSLYDKFGLDR-NTQDFTGHAL 618
+K WK+ S + DKFG+DR +F H L
Sbjct: 137 SKRWKELSASAPCLDICVDKFGMDRVRFSEFVAHLL 172
>05_01_0098 - 659570-660388
Length = 272
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 544 TANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQQPAIQTIRR--IKLYSDSLAKYGKS 717
TA + +GL T+D T L + + P RR LYS +A+Y
Sbjct: 184 TARFKDGVTIYGLGWCTRDITAADCGLCVAQAVAEMPNYCRFRRGCRVLYSSCMARYETY 243
Query: 718 PYLYPLYG 741
P+ +PL G
Sbjct: 244 PFFFPLDG 251
>02_04_0468 - 23172561-23174201
Length = 546
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 406 VPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKD 531
VPVD KEALA D++ R R +IY D +W D
Sbjct: 380 VPVDFKEALADDVLPDGTPVRARQRVIYYTYAIGRDPASWGD 421
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -1
Query: 417 IDRYFGDFSTFVNITSFDGLKLQVPGDARVNKQFD*QSISHQKLRNQVNVPVSTSTVCF 241
+DR F + TF +TS +K Q ++ + Q ++ + K N NVP ST+CF
Sbjct: 295 MDRDFPAYVTFGGVTSSMTIKGQSLSNSTL-PQGQRYAMINAKNANAANVPSENSTLCF 352
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 367 EGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIY 489
EG V+K K+ +V V K + G F R R+ LIY
Sbjct: 217 EGDVVFKDQKLKEVAVKMKNIVMQQQAGTFVPDRDRDELIY 257
>03_06_0165 - 32108697-32109788
Length = 363
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 142 VLHIDRNKYYGGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLVKL 321
++ ID + E + P+EE + P P + + R++ V L P+F++ + K+
Sbjct: 158 IMDIDPTYWCSSEVLAYDPVEECWCW--GPLPQPPFFQDREYKVPLKPRFMVVDS--TKI 213
Query: 322 LIHTGVTRY 348
+ T Y
Sbjct: 214 CVSTTTATY 222
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 43 YTIIMDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 189
++ I E YD I++G G C L+ LS K +L YG + S
Sbjct: 42 FSRIQHEAYDYIIVGGGTAGCPLAATLSQKYKVLLLERGGSPYGNRNIS 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,660,175
Number of Sequences: 37544
Number of extensions: 450027
Number of successful extensions: 1228
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -