Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9g24
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    63   2e-10
AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin pro...    53   2e-07
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    30   1.7  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchang...    28   7.0  
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical...    27   9.3  

>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 41/103 (39%), Positives = 53/103 (51%)
 Frame = +1

Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 495
           + KQI  E+ AS  YL+M  YF  D V  P  AK F + + EEREHAT+L+    +RG  
Sbjct: 16  VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRG-- 73

Query: 496 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREGH 624
            G V  L   + P N  W +   A E AL LE     S+ + H
Sbjct: 74  -GRVV-LQDIQKPENDEWGTALKAFEAALALEKFNNESLLKLH 114


>AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin
           protein 1 protein.
          Length = 170

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 36/103 (34%), Positives = 51/103 (49%)
 Frame = +1

Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 495
           + KQI  E+ AS  YL+M A+F  D +     AK F + + EER HAT+L+    +RG  
Sbjct: 16  VNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVRG-- 73

Query: 496 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREGH 624
            G V  +   + P    W +   A E AL LE     S+ + H
Sbjct: 74  -GRVA-MQNIQKPEKDEWGTVLEAFEAALALERANNASLLKLH 114


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
 Frame = +2

Query: 398 TAPASRSYSSMLRLKNASTRPSS-LTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSS 574
           ++ +S + ++    ++ ST PSS +TT +   S     P+SS + P  T     +   SS
Sbjct: 465 SSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASS 524

Query: 575 TPS--SWRVTSPTASGKVIKTCESSFNDYHLVD 667
           T S  S + +S T   +   + + +  D++ V+
Sbjct: 525 TQSSTSTQQSSTTTKSETTTSSDGTNPDFYFVE 557


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
 Frame = +2

Query: 398 TAPASRSYSSMLRLKNASTRPSS-LTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSS 574
           ++ +S + ++    ++ ST PSS +TT +   S     P+SS + P  T     +   SS
Sbjct: 465 SSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASS 524

Query: 575 TPS--SWRVTSPTASGKVIKTCESSFNDYHLVD 667
           T S  S + +S T   +   + + +  D++ V+
Sbjct: 525 TQSSTSTQQSSTTTKSETTTSSDGTNPDFYFVE 557


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 24/82 (29%), Positives = 38/82 (46%)
 Frame = +2

Query: 398  TAPASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSST 577
            T+ A+ +  S+   + A++  S +TT S   + Q+    SS T  P T  G      SST
Sbjct: 801  TSGAASTTGSITSTQQATSTSSVITTGS-TSAPQSSTAVSSTTTSPSTTTGSTPAPQSST 859

Query: 578  PSSWRVTSPTASGKVIKTCESS 643
             +S    SP  + + I T  S+
Sbjct: 860  VASTTTVSPYTTTECICTTVSN 881


>Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical
           protein C17G1.4b protein.
          Length = 844

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 509 PTSSRTGPPQTRRGRAAHQPSSTPSSWRVTSPTASGK 619
           P+ +  GPP   R ++ H P  +P ++  + P+ SG+
Sbjct: 647 PSQTSHGPPLLSRSQSMHTPMISP-NFNASQPSTSGR 682


>Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical
           protein C17G1.4a protein.
          Length = 925

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 509 PTSSRTGPPQTRRGRAAHQPSSTPSSWRVTSPTASGK 619
           P+ +  GPP   R ++ H P  +P ++  + P+ SG+
Sbjct: 647 PSQTSHGPPLLSRSQSMHTPMISP-NFNASQPSTSGR 682


>AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchangers
           protein 9 protein.
          Length = 651

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
 Frame = -1

Query: 651 SLKLLSQVLMTFPDAVGDVTLQLEGVLEG*CAALPRRVCGGPVRD-EVGYG------ACQ 493
           S++LL   +M + + +GD+   +  V +G          GGP+ +  +G+G      A Q
Sbjct: 525 SMELLGLTIMAWSNCIGDIVADIAVVKQGYPKMAMAAAIGGPLFNLLIGFGLPFTIAAAQ 584

Query: 492 LSPHEQVVNELGRVLAFF 439
               E ++N + R+L  F
Sbjct: 585 GKEMELLINPVYRLLMLF 602


>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical protein
            C34E10.8 protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +2

Query: 407  ASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSSTPSS 586
            AS S SS   L + +T  SS  T S GE         S   P   +      +P +  SS
Sbjct: 861  ASESTSSEATLIHDTTSSSSAETVS-GEPPAKKSSDVSAPVPSPEKEKEKIDRPKTPKSS 919

Query: 587  WRVTSPTASGKVIKTCESSFN 649
             + T+PT SG+  +    + N
Sbjct: 920  TKRTTPTPSGRTPRAAAIAAN 940


>AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical
           protein F19B10.10 protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 174 SYNHRFFDDTQKNMRS*KQ*LYKSSLY 94
           SYNHRFF    K++ S K+ LYK+ ++
Sbjct: 99  SYNHRFF--IHKDISSDKKFLYKNDIF 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,670,639
Number of Sequences: 27780
Number of extensions: 274766
Number of successful extensions: 869
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)