Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9g24
(678 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 27 0.16
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 2.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 4.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.2
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 8.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 8.2
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 27.1 bits (57), Expect = 0.16
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 526 RAPANTSWESGASALEHALKLESDVTNSI 612
R P SW S + + A KL+ ++ NSI
Sbjct: 149 RTPTEASWHSPEAHISVAQKLQKEIPNSI 177
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 530 PPQTRRGRAAHQPSSTPSSWRVTSPTASGKVIKTCESS 643
P + R +A SST +S R S TA+ V+ C S+
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASSTAATLVLSGCPSN 860
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 613 REGHQDLREQLQRLPPGRL 669
R+G Q+ E+L LPP R+
Sbjct: 627 RDGTQETEERLPPLPPKRI 645
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 527 GPPQTRRGRAAHQPSSTPSSWRVTSPTASGKVIKTCESSFN 649
GPP H P T ++V P A K T E++ N
Sbjct: 333 GPPGVPGDHGDHAPKQTEVRFKVHDPKAHSKG-GTLENTIN 372
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 527 GPPQTRRGRAAHQPSSTPSSWRVTSPTASGKVIKTCESSFN 649
GPP H P T ++V P A K T E++ N
Sbjct: 333 GPPGVPGDHGDHAPKQTEVRFKVHDPKAHSKG-GTLENTIN 372
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 31 ANRTYLFEFPANYKSPSAPVCVKA 102
A RTYLF+ N P V A
Sbjct: 545 AGRTYLFDLDYNESEEQCPYTVDA 568
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 524 TGPPQTRRGRAAHQPSSTPSSWRVTSPTASG 616
T P G ++ PSS S + SPT+ G
Sbjct: 79 TSPSYPGGGSSSPSPSSPSSFFSSVSPTSLG 109
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 595 DVTNSIREGHQDLREQLQRLPPGRLFVR 678
+VT +R ++L++LP G LF++
Sbjct: 1307 EVTWKVRGAVLQSSDRLRQLPEGSLFIK 1334
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -2
Query: 611 MLLVTSLSSLRACSRADAPLSHDVFAGALYVMRSV 507
+LL++++ + CS + L D+F G ++R V
Sbjct: 11 ILLISAVFCVGLCSEDEERLVRDLFRGYNKLIRPV 45
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 67 YKSPSAPVCVKA*LIQLLLSRAHIFLSI 150
Y SP++ VC+ A LI L + +++ I
Sbjct: 621 YISPASQVCIAAALIALQIVLTLVWMII 648
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 67 YKSPSAPVCVKA*LIQLLLSRAHIFLSI 150
Y SP++ VC+ A LI L + +++ I
Sbjct: 711 YISPASQVCIAAALIALQIVLTLVWMII 738
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,768
Number of Sequences: 438
Number of extensions: 3233
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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