Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9g06
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024776-1|AAK68468.1|  338|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     29   4.3  
AL032644-6|CAA21671.1|  574|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z83228-3|CAB60998.1|  536|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF145377-1|AAD39816.1|  536|Caenorhabditis elegans MOM-4 protein.      28   7.4  
AF143242-1|AAD37359.1|  536|Caenorhabditis elegans protein kinas...    28   7.4  
AF067943-4|AAC17661.1|  359|Caenorhabditis elegans Hypothetical ...    28   7.4  
U97193-12|AAB52441.1|  283|Caenorhabditis elegans Hypothetical p...    27   9.8  

>AC024776-1|AAK68468.1|  338|Caenorhabditis elegans Hypothetical
           protein Y41D4B.18 protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 109 TSTNRIYAKPSSTSANETPSPS 174
           T+T+  YA PSST++  TP+P+
Sbjct: 228 TTTSTAYAAPSSTASTSTPAPT 249


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 133 KPSSTSANETPSPSLASPRVALTAAEDSGGRFE 231
           KPSS  AN  P   L   + AL     +GGRF+
Sbjct: 603 KPSSMFANHPPPAQLTMDKRALQINTQTGGRFQ 635


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 133 KPSSTSANETPSPSLASPRVALTAAEDSGGRFE 231
           KPSS  AN  P   L   + AL     +GGRF+
Sbjct: 603 KPSSMFANHPPPAQLTMDKRALQINTQTGGRFQ 635


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 133 KPSSTSANETPSPSLASPRVALTAAEDSGGRFE 231
           KPSS  AN  P   L   + AL     +GGRF+
Sbjct: 603 KPSSMFANHPPPAQLTMDKRALQINTQTGGRFQ 635


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 133 KPSSTSANETPSPSLASPRVALTAAEDSGGRFE 231
           KPSS  AN  P   L   + AL     +GGRF+
Sbjct: 603 KPSSMFANHPPPAQLTMDKRALQINTQTGGRFQ 635


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 133 KPSSTSANETPSPSLASPRVALTAAEDSGGRFE 231
           KPSS  AN  P   L   + AL     +GGRF+
Sbjct: 627 KPSSMFANHPPPAQLTMDKRALQINTQTGGRFQ 659


>AL032644-6|CAA21671.1|  574|Caenorhabditis elegans Hypothetical
           protein Y51H1A.6 protein.
          Length = 574

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
 Frame = +1

Query: 103 PWTSTNRIYAKPSSTSANETPSPSLASPRVALTAAEDSGGRFELCDHGYGKSSVKLLHVH 282
           PW         P STS   +PSP L  P       +D+  RF+  + G G   +  L  H
Sbjct: 223 PWQEETAANGGPQSTSLIRSPSPMLKEP-----LFDDNEIRFKCAECGDGFPVMDRLCDH 277

Query: 283 RDEGHHV---IREFEVFTE-----LKLASETAYILGDNKEVVATDSQKNTVYLLAKKYGV 438
             + H     +RE + F +       L  E A +  D ++ +   S+  +  L    Y  
Sbjct: 278 MIKQHDCQTNVREVQFFADRDFENFLLKVEKATLGRDPEDAIRKKSRAGSSQLFVCNYMN 337

Query: 439 KTPEEFGAVV 468
           K  ++   +V
Sbjct: 338 KGRQKMAELV 347


>AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.7 protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = +1

Query: 211 DSGGRFELCDHGYGKSSVKLLHVHRDEGHHVIREFEVFTELKLASETAYILGDNKEVVAT 390
           D   R  L +H  GK+ + ++        H+I+EF    EL LA     +  +N  + A 
Sbjct: 109 DLSHRLHLVEHRVGKAQIVVMEKVEKATGHIIQEFHE-RELDLARNVEILQEENSNLTAK 167

Query: 391 DSQ 399
           + +
Sbjct: 168 NEK 170


>Z83228-3|CAB60998.1|  536|Caenorhabditis elegans Hypothetical
           protein F52F12.3 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 118 NRIYAKPSSTSANETPSPSLASPRVALTAAEDSG 219
           N   +KPSS+S++ +PSP+  +P    T   DSG
Sbjct: 3   NSSQSKPSSSSSSHSPSPAAITPTQRTT--RDSG 34


>AF145377-1|AAD39816.1|  536|Caenorhabditis elegans MOM-4 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 118 NRIYAKPSSTSANETPSPSLASPRVALTAAEDSG 219
           N   +KPSS+S++ +PSP+  +P    T   DSG
Sbjct: 3   NSSQSKPSSSSSSHSPSPAAITPTQRTT--RDSG 34


>AF143242-1|AAD37359.1|  536|Caenorhabditis elegans protein kinase
           MOM-4 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 118 NRIYAKPSSTSANETPSPSLASPRVALTAAEDSG 219
           N   +KPSS+S++ +PSP+  +P    T   DSG
Sbjct: 3   NSSQSKPSSSSSSHSPSPAAITPTQRTT--RDSG 34


>AF067943-4|AAC17661.1|  359|Caenorhabditis elegans Hypothetical
           protein F59B1.6 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 175 KKVKESH*HSCLRA*RIFYLCLSKAFWGRFDSLNF 71
           K+ KES  +  +     F L LS+ +WG F SL F
Sbjct: 48  KRKKESQIYQIVLITHCFTLWLSQVYWGSFHSLVF 82


>U97193-12|AAB52441.1|  283|Caenorhabditis elegans Hypothetical
           protein C06A5.8a protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 702 EVNKC*LCCFQYTESAKARLNYHC 631
           E  KC +CC  Y E+ K     HC
Sbjct: 34  EFLKCQVCCTNYNETTKLARGLHC 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,022,780
Number of Sequences: 27780
Number of extensions: 338018
Number of successful extensions: 1143
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)