Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9g06
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.30 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -2

Query: 380  TSLLSPKMYAVSEANLSSVKTSNSLIT*CPSSR*TWRSLTELLPYPWSQSS 228
            TSL  PK       N+ + KT+  +     + +     LT+ LPYPW+  +
Sbjct: 1068 TSLALPKNEGPFRLNVETAKTNEEMWELIDTEK-----LTDRLPYPWTMDN 1113


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 133 KPSSTSANETPSPSLASPRVALTAAED 213
           KP+S+SA+  P+   +SPR      ED
Sbjct: 591 KPASSSASSAPTSVCSSPRSEDKEVED 617


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +1

Query: 106  WTSTNRIYAKPSS----TSANE-TPSPSLASPRVALTAAEDSGGRFELCDHGYGK 255
            W    +I   PS+    T   E TP   +A  +++   A DSG  F    + YG+
Sbjct: 841  WLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASNLYGR 895


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +1

Query: 106  WTSTNRIYAKPSS----TSANE-TPSPSLASPRVALTAAEDSGGRFELCDHGYGK 255
            W    +I   PS+    T   E TP   +A  +++   A DSG  F    + YG+
Sbjct: 837  WLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASNLYGR 891


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 301 VIREFEVFTELKLASETAYIL 363
           +IREFE+  E +L  +  +IL
Sbjct: 483 IIREFEIIVEEELDLQFEFIL 503


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 349 TAYILGDNKEVVATDSQKNTVYLLAKKYGVKTPE 450
           T Y+L   K V+  D+ +   YL  K   +  PE
Sbjct: 272 TVYVLRTKKGVMRVDASEEYSYLRLKGQMLYIPE 305


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 349 TAYILGDNKEVVATDSQKNTVYLLAKKYGVKTPE 450
           T Y+L   K V+  D+ +   YL  K   +  PE
Sbjct: 272 TVYVLRTKKGVMRVDASEEYSYLRLKGQMLYIPE 305


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 209 RTPAVGLNSATTDTAKVRLSFSTFIETKDITLSGSLKSLRNLNWLQRQHT 358
           R+P V      +D   V   F T  + +D+T     ++L+ +  L   HT
Sbjct: 74  RSPMVDFGYDISDFKDVDPIFGTIKDLEDLTAEAKKQNLKVILDLVPNHT 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,026
Number of Sequences: 438
Number of extensions: 3718
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)