Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9f23
         (219 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0155 + 18595193-18596224,18596863-18597264                       27   2.1  
05_05_0362 + 24415257-24415481,24415585-24415835,24416659-244167...    25   6.3  

>05_04_0155 + 18595193-18596224,18596863-18597264
          Length = 477

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -1

Query: 165 SIIKFKLNRLKNNVVQSCTCFRGNKPY 85
           ++ +F+ ++  N V++SCT  R N+P+
Sbjct: 28  NVTQFQSSKCSNLVLKSCTATRPNRPF 54


>05_05_0362 +
           24415257-24415481,24415585-24415835,24416659-24416755,
           24417272-24417820,24418029-24418482,24418747-24418860,
           24418940-24419023,24419499-24420067
          Length = 780

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 46  KLCFLIYXXXXXXXXXVTSETGA*LHDIIFKTV*FKFNNTLPTLFVRFMK 195
           KL F +Y            E      D  ++ V   FN+ +PTL  RF+K
Sbjct: 303 KLAFFLYMLSHNASFEDLQEKFGHSGDSFYRHVKHFFNSVVPTLLKRFLK 352


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,695,306
Number of Sequences: 37544
Number of extensions: 43107
Number of successful extensions: 53
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 14,793,348
effective HSP length: 52
effective length of database: 12,841,060
effective search space used: 256821200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)