Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9f19
(689 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071206-1|AAL48828.1| 226|Drosophila melanogaster RE24819p pro... 123 2e-28
AE014296-2937|AAF49322.2| 226|Drosophila melanogaster CG6259-PA... 123 2e-28
BT029708-1|ABL75765.1| 333|Drosophila melanogaster IP17475p pro... 36 0.039
AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA... 31 1.1
AE013599-3414|AAF46863.1| 212|Drosophila melanogaster CG4071-PA... 31 1.5
M24441-1|AAA28652.1| 975|Drosophila melanogaster protein ( D.me... 31 1.9
AY094959-1|AAM11312.1| 975|Drosophila melanogaster SD02406p pro... 31 1.9
AE013599-2234|AAF58029.1| 975|Drosophila melanogaster CG7765-PA... 31 1.9
BT003747-1|AAO41408.1| 256|Drosophila melanogaster RH72336p pro... 30 2.6
AY094715-1|AAM11068.1| 243|Drosophila melanogaster GH16325p pro... 30 2.6
AE014297-3911|AAF56559.1| 256|Drosophila melanogaster CG14542-P... 30 2.6
BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p pro... 29 4.5
AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-P... 29 4.5
AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p pro... 29 6.0
AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin su... 29 6.0
AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4 ... 29 6.0
AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p pro... 29 6.0
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ... 29 6.0
AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-P... 29 6.0
>AY071206-1|AAL48828.1| 226|Drosophila melanogaster RE24819p
protein.
Length = 226
Score = 123 bits (297), Expect = 2e-28
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +3
Query: 462 YEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDE 641
YEQQ ++LR QSFNMEQANYA Q+LKDT T++AMKDGV QMK E+KKINID I+D+ D+
Sbjct: 75 YEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEYKKINIDQIEDIQDD 134
Query: 642 LADMMEQADEVQEALG 689
+ADM EQADEVQEALG
Sbjct: 135 MADMFEQADEVQEALG 150
Score = 82.6 bits (195), Expect = 5e-16
Identities = 37/49 (75%), Positives = 44/49 (89%)
Frame = +1
Query: 205 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMF 351
RA NIE+K+ L+ ELRKY++QMSKMREGPAKNSVKQKA+RVLKQKK +
Sbjct: 27 RATNIEEKISNLEAELRKYREQMSKMREGPAKNSVKQKALRVLKQKKAY 75
Score = 46.4 bits (105), Expect = 4e-05
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 131 MNRLFGRAKPKEPGPSITDCIKNM-AEPIILNRKSRNWTQNLENTR 265
MNRLFGR KPKEPGPS+ DCI + A + K N L R
Sbjct: 1 MNRLFGRGKPKEPGPSLNDCIAGVDARATNIEEKISNLEAELRKYR 46
>AE014296-2937|AAF49322.2| 226|Drosophila melanogaster CG6259-PA
protein.
Length = 226
Score = 123 bits (297), Expect = 2e-28
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +3
Query: 462 YEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDE 641
YEQQ ++LR QSFNMEQANYA Q+LKDT T++AMKDGV QMK E+KKINID I+D+ D+
Sbjct: 75 YEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEYKKINIDQIEDIQDD 134
Query: 642 LADMMEQADEVQEALG 689
+ADM EQADEVQEALG
Sbjct: 135 MADMFEQADEVQEALG 150
Score = 82.6 bits (195), Expect = 5e-16
Identities = 37/49 (75%), Positives = 44/49 (89%)
Frame = +1
Query: 205 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMF 351
RA NIE+K+ L+ ELRKY++QMSKMREGPAKNSVKQKA+RVLKQKK +
Sbjct: 27 RATNIEEKISNLEAELRKYREQMSKMREGPAKNSVKQKALRVLKQKKAY 75
Score = 46.4 bits (105), Expect = 4e-05
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 131 MNRLFGRAKPKEPGPSITDCIKNM-AEPIILNRKSRNWTQNLENTR 265
MNRLFGR KPKEPGPS+ DCI + A + K N L R
Sbjct: 1 MNRLFGRGKPKEPGPSLNDCIAGVDARATNIEEKISNLEAELRKYR 46
>BT029708-1|ABL75765.1| 333|Drosophila melanogaster IP17475p
protein.
Length = 333
Score = 36.3 bits (80), Expect = 0.039
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +1
Query: 211 DNIEQKVQKLDTEL-RKYKDQMSKMREGPAKN--SVKQKAMRVLKQ 339
D I +K++KL L +KY+DQ+ + +E +N ++KQK +LKQ
Sbjct: 258 DTISEKIKKLKQRLIQKYEDQLDRQKESQQRNALAMKQKCFDLLKQ 303
>AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA
protein.
Length = 866
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 483 LRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQ 662
L+A+ +EQ+N Q + + A+KD +T M + KK+N +D N + ++
Sbjct: 389 LQAEHHQLEQSNAQHQ---EAQHEVRALKDTITTMDTKLKKLN----EDANKLKKEKTKK 441
Query: 663 ADEVQ 677
DE+Q
Sbjct: 442 LDEIQ 446
>AE013599-3414|AAF46863.1| 212|Drosophila melanogaster CG4071-PA,
isoform A protein.
Length = 212
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 459 WYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVND 638
+ E L N Q N+E+ + + + +K G +KK + ++ID ++ + D
Sbjct: 73 YQESLLTNADKQLENLEKLAADIEFAQVEMKVLDGLKAGNAALKKVHEMLDIDEVERIMD 132
Query: 639 ELADMMEQADEVQEAL 686
E + +E+ E+ L
Sbjct: 133 ETREGIEKQQEIDAIL 148
>M24441-1|AAA28652.1| 975|Drosophila melanogaster protein (
D.melanogaster kinesinheavy chain mRNA, complete cds. ).
Length = 975
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/72 (16%), Positives = 34/72 (47%)
Frame = +3
Query: 465 EQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDEL 644
E+Q+D+LR + ++ A + + + ++ E ++ + + ++ DE+
Sbjct: 685 EEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEI 744
Query: 645 ADMMEQADEVQE 680
A + DE+++
Sbjct: 745 AAKQHEMDEMKD 756
>AY094959-1|AAM11312.1| 975|Drosophila melanogaster SD02406p
protein.
Length = 975
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/72 (16%), Positives = 34/72 (47%)
Frame = +3
Query: 465 EQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDEL 644
E+Q+D+LR + ++ A + + + ++ E ++ + + ++ DE+
Sbjct: 685 EEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEI 744
Query: 645 ADMMEQADEVQE 680
A + DE+++
Sbjct: 745 AAKQHEMDEMKD 756
>AE013599-2234|AAF58029.1| 975|Drosophila melanogaster CG7765-PA
protein.
Length = 975
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/72 (16%), Positives = 34/72 (47%)
Frame = +3
Query: 465 EQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDEL 644
E+Q+D+LR + ++ A + + + ++ E ++ + + ++ DE+
Sbjct: 685 EEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEI 744
Query: 645 ADMMEQADEVQE 680
A + DE+++
Sbjct: 745 AAKQHEMDEMKD 756
>BT003747-1|AAO41408.1| 256|Drosophila melanogaster RH72336p
protein.
Length = 256
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 501 NMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQADEVQE 680
N++ + QTLK +T AMK M+ +++N+ I + + E D +E
Sbjct: 82 NIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEE 141
Query: 681 AL 686
+
Sbjct: 142 MI 143
>AY094715-1|AAM11068.1| 243|Drosophila melanogaster GH16325p
protein.
Length = 243
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 501 NMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQADEVQE 680
N++ + QTLK +T AMK M+ +++N+ I + + E D +E
Sbjct: 69 NIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEE 128
Query: 681 AL 686
+
Sbjct: 129 MI 130
>AE014297-3911|AAF56559.1| 256|Drosophila melanogaster CG14542-PA
protein.
Length = 256
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 501 NMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQADEVQE 680
N++ + QTLK +T AMK M+ +++N+ I + + E D +E
Sbjct: 82 NIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEE 141
Query: 681 AL 686
+
Sbjct: 142 MI 143
>BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p
protein.
Length = 884
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 672 LHQLVPSYQLTHHLHHQWNQ 613
LHQL S QL H LHHQ Q
Sbjct: 40 LHQLPLSVQLQHQLHHQQQQ 59
>AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-PD,
isoform D protein.
Length = 1456
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 672 LHQLVPSYQLTHHLHHQWNQ 613
LHQL S QL H LHHQ Q
Sbjct: 40 LHQLPLSVQLQHQLHHQQQQ 59
>AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p
protein.
Length = 1775
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 130 HEQIIWKSETQRTWPQHYGLH*KHGRADN--IEQKVQKLDTELRKYKDQMSKMREGPAKN 303
H++ +K+ R + Y L+ K DN +EQKVQ+L ++L++ ++ + + E +
Sbjct: 65 HKEEQFKNRELREKLKKYALNLKKRTQDNADLEQKVQELTSQLQEQQELVKQKEEVEREP 124
Query: 304 SVKQKAMRVLKQK 342
V + L+Q+
Sbjct: 125 IVDNHRVEQLQQQ 137
>AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin subunit
SMC4 protein.
Length = 1409
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/75 (17%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 465 EQQLDNLRAQSFNME-QANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDE 641
++ L++++ Q+ ++ + NY + I +K+G+ + + E+K++ + SI + +
Sbjct: 787 QKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAV-SITSLEQQ 845
Query: 642 LADMMEQADEVQEAL 686
+A ++Q + ++ +
Sbjct: 846 MASNLKQCEAQRQRM 860
>AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4
homolog Gluon protein.
Length = 1409
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/75 (17%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 465 EQQLDNLRAQSFNME-QANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDE 641
++ L++++ Q+ ++ + NY + I +K+G+ + + E+K++ + SI + +
Sbjct: 787 QKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAV-SITSLEQQ 845
Query: 642 LADMMEQADEVQEAL 686
+A ++Q + ++ +
Sbjct: 846 MASNLKQCEAQRQRM 860
>AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p protein.
Length = 1012
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/75 (17%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 465 EQQLDNLRAQSFNME-QANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDE 641
++ L++++ Q+ ++ + NY + I +K+G+ + + E+K++ + SI + +
Sbjct: 787 QKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAV-SITSLEQQ 845
Query: 642 LADMMEQADEVQEAL 686
+A ++Q + ++ +
Sbjct: 846 MASNLKQCEAQRQRM 860
>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
protein.
Length = 2779
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 130 HEQIIWKSETQRTWPQHYGLH*KHGRADN--IEQKVQKLDTELRKYKDQMSKMREGPAKN 303
H++ +K+ R + Y L+ K DN +EQKVQ+L ++L++ ++ + + E +
Sbjct: 1069 HKEEQFKNRELREKLKKYALNLKKRTQDNADLEQKVQELTSQLQEQQELVKQKEEVEREP 1128
Query: 304 SVKQKAMRVLKQK 342
V + L+Q+
Sbjct: 1129 IVDNHRVEQLQQQ 1141
>AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-PA
protein.
Length = 1409
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/75 (17%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 465 EQQLDNLRAQSFNME-QANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDE 641
++ L++++ Q+ ++ + NY + I +K+G+ + + E+K++ + SI + +
Sbjct: 787 QKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAV-SITSLEQQ 845
Query: 642 LADMMEQADEVQEAL 686
+A ++Q + ++ +
Sbjct: 846 MASNLKQCEAQRQRM 860
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,282,327
Number of Sequences: 53049
Number of extensions: 567633
Number of successful extensions: 1717
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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