Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9e24
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1105 + 30438140-30438350,30438448-30438926 38 0.006
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450... 36 0.024
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 35 0.042
01_05_0710 + 24492337-24493053 33 0.17
01_07_0095 + 41053562-41053603,41054609-41054846,41055064-410553... 30 1.2
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312... 30 1.6
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873... 30 1.6
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 2.1
08_01_1022 + 10323158-10323393,10323486-10323531,10325887-103259... 29 2.8
04_01_0031 + 381389-381841 29 2.8
12_02_0065 - 13109652-13110746,13110843-13111762,13139462-131395... 28 4.8
02_02_0445 - 10351483-10351606,10351987-10353170 28 4.8
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 28 6.4
08_01_0445 + 3942820-3943030,3943719-3943853,3943942-3944150,394... 28 6.4
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722 28 6.4
05_03_0122 - 8669422-8669609,8669759-8670111,8670669-8670824,867... 28 6.4
02_01_0302 - 2021221-2023305 28 6.4
12_01_1109 - 11726818-11727719,11728225-11728394,11730407-117304... 27 8.5
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 27 8.5
03_01_0201 - 1592180-1592218,1592517-1592602,1592966-1593064,159... 27 8.5
02_02_0379 + 9565001-9565515,9565553-9565833,9565884-9566084,956... 27 8.5
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +3
Query: 456 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMF 587
+R AF+RKVYAIL Q+++T+ ++ ++ RP ++ P F
Sbjct: 15 LRWAFVRKVYAILSIQMLLTIAVASVVVFVRPVALFFVSTPAGF 58
>05_04_0254 -
19444409-19444621,19444724-19444887,19444974-19445087,
19446086-19446395
Length = 266
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 432 GFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNP 578
G E ++R F+RKVY IL QL++T AL + H ++ +P
Sbjct: 43 GISRGESALRWGFVRKVYGILAAQLLLTTAVSALTVLHPTLNATLSSSP 91
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 35.1 bits (77), Expect = 0.042
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 405 SVGEDGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPT--KVWVAQNP 578
+VG G + +R AFIRKVYAI+ QL+VT+ IA +Y P + ++A+ P
Sbjct: 25 AVGVAGVACTYMIERPELRWAFIRKVYAIVATQLVVTVA-IAAAVYSVPAIRRFFLARTP 83
>01_05_0710 + 24492337-24493053
Length = 238
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -1
Query: 398 RWDIARFTVTSAAICRLEARLRGRISALRVCSTRGIRSSWRVSSTLR 258
R D A F V A +CRLE R ++ALR + GIR+S ++ ++R
Sbjct: 153 RPDSATFAVAVAGLCRLEDP-RNALAALREMAVDGIRTSAKLRESVR 198
>01_07_0095 +
41053562-41053603,41054609-41054846,41055064-41055312,
41055419-41055469,41056044-41056256,41056305-41056367,
41056422-41056474,41056953-41057067,41057150-41057404,
41057531-41058618
Length = 788
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 441 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFW 590
FT S+R AFI +Y L+ Q M F++ + PT + + +FW
Sbjct: 297 FTSASVRLAFITIIYPCLILQYMGQAAFLSKNILDMPTGFYDSIPGPIFW 346
>11_06_0192 +
21128298-21128829,21129341-21129407,21131169-21131211,
21131301-21131367,21131613-21131770,21131863-21132057
Length = 353
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 456 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFW 590
+R AF+RKVY IL Q VT + RP + A W
Sbjct: 79 LRWAFVRKVYCILALQFAVTAAIAVVAWAVRPIPRFFAAGSLASW 123
>03_06_0292 -
32886148-32886354,32886997-32887154,32887265-32887378,
32887660-32887924
Length = 247
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 456 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVW 563
+R AFIRKVY I+ QL+VT+ P K +
Sbjct: 32 LRWAFIRKVYVIVSVQLLVTVAVAGAVNLVEPIKTF 67
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 539 QEQSDETHRHHQLTHQDRVHLSDESPAYRFFSEIETLDFA 420
+E+ + H++++ T + R D +YRFF+E+E L A
Sbjct: 149 KEKFENVHKYYKRTKEGRAGRQD-GKSYRFFTELEALHAA 187
>08_01_1022 +
10323158-10323393,10323486-10323531,10325887-10325941,
10326027-10326107,10326189-10326400
Length = 209
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/98 (27%), Positives = 43/98 (43%)
Frame = +1
Query: 172 KADRTLRAGRTRKVDRTRKVDRTHRVEVTRKVELTLQEERIPRVEHTRRADMRPLSLASN 351
KA +L AGR ++ R VD L+L EE++ R E +A +RP + +
Sbjct: 66 KAAASLFAGR--QLSRCSGVDPDEHPIKKEFERLSLWEEKLNRFEDWDKAPLRPTTTVNT 123
Query: 352 LHMAALVTVNRAISHRTTQSAKMAKSRVSISLKNLYAG 465
AA + ++ H TT K + +S Y+G
Sbjct: 124 --QAAARFIGHSLPHLTTDQ-KRSMQAISRGEGGSYSG 158
>04_01_0031 + 381389-381841
Length = 150
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 155 GRLSESRRTVPSGRGVPARWTVPARWTVPTGWRLPARWSLPSRRSVSP 298
GRL R + GVP T RW P L W+LP S P
Sbjct: 48 GRLPLPRTDGRTRTGVPPPRTRERRWCTPRTSTLRREWALPDTASPPP 95
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 170 SRRTVPSGRGVPARWTVPARWTVPTGWRLPARWSLPSRRSVSPGWSIP 313
+R VP R RW P T+ W LP S P + P S P
Sbjct: 59 TRTGVPPPRTRERRWCTPRTSTLRREWALPDTASPPPPLPLEPAPSAP 106
>12_02_0065 -
13109652-13110746,13110843-13111762,13139462-13139528,
13139607-13139675,13139877-13140020,13140100-13140171,
13140316-13140387,13140466-13140558,13140655-13140726,
13140809-13140925
Length = 906
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 200 VPARWTVPARWTVPTGWRLPARWSLPSRRS 289
V A PAR P+ WR P R S PSRRS
Sbjct: 6 VAAAAAAPARSRWPS-WRTPPRSSTPSRRS 34
>02_02_0445 - 10351483-10351606,10351987-10353170
Length = 435
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 145 FEHREIIRIKADRTLRAGRTR---KVDRTRKVDRTHRVEVTRKVELTLQEER 291
+++REI RIK DR R R + ++++ R + R E RK L+E +
Sbjct: 262 WKNREIARIKRDREERDARLKEKEEIEKVRNMTEEERREWERKNPKPLRENK 313
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 GVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKS 577
G DP AD +DG P PP+ G +S
Sbjct: 549 GTLDPMADADANDGSQMQTPAPPSPAGEGRRRS 581
>08_01_0445 +
3942820-3943030,3943719-3943853,3943942-3944150,
3944258-3944464
Length = 253
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 413 RRWRSQGFRFH*KIYTQGFHPKGVRDPDVSADGDDGFHRSVPVPPTD 553
RR +GFR F+P G D +S D DD P PPT+
Sbjct: 42 RRAAEEGFRLR-----VAFNPSGNFDLSLSTDQDDAPQVEPPPPPTE 83
>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
Length = 740
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 393 GYSPVHRNQRRHMQVGSQAEGAHIRP 316
G + H +QRR Q Q +G H+RP
Sbjct: 156 GRAASHESQRRRQQQQQQLKGRHLRP 181
>05_03_0122 -
8669422-8669609,8669759-8670111,8670669-8670824,
8670999-8671168,8672133-8672297,8673190-8673384,
8673506-8673634,8673759-8673980
Length = 525
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 173 RRTVPSGRGVPARWTVPARWTVPTGWRLPARWSLPS 280
R+T PS P+ + +P R GW + W LPS
Sbjct: 28 RKTPPSPPPPPSSFGLPVRAVCLGGWLVTEGWILPS 63
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +2
Query: 179 TVPSGRGVPARWTVPARWTVPTGWRLPARWSLPSRRSVSPGWSIPAGRICAPS 337
T PS P+ T P+ + P G P+ S PS + P S P PS
Sbjct: 490 TTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPPQSTPTHPS 542
>12_01_1109 -
11726818-11727719,11728225-11728394,11730407-11730483,
11730559-11730645,11730730-11730816,11731887-11731991,
11732133-11732168,11733636-11733754,11733862-11734067,
11735854-11735906,11735986-11736153,11736507-11736591,
11737845-11738023,11738939-11739070,11739209-11739295,
11739920-11739972,11740820-11740892,11741791-11742442,
11743165-11743229
Length = 1111
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 128 SSLCRSLNIGRLSESRRTVPSGRGVPARWTVPARWTVPTG 247
++ CR+L++ L+ V S +GVPA + VP+ +P G
Sbjct: 796 AAACRTLSV--LASLSNKVYSDQGVPAAFRVPSGAVIPFG 833
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 461 QGFHPKGVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKSLH 583
QG H G P+ G G H PP Q GG S H
Sbjct: 150 QGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRGGSGSHH 190
>03_01_0201 -
1592180-1592218,1592517-1592602,1592966-1593064,
1593131-1593232,1593398-1593525,1593602-1593693,
1593798-1593869,1593964-1594032,1594116-1594199,
1594292-1594407,1594752-1594875,1594947-1595053,
1595725-1595875
Length = 422
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 324 IRPAGMLHPGDTLLLE---GKLHLAGNLHPVGTV 232
++P +HP D L+LE G++ LAG + P V
Sbjct: 93 VKPHNFMHPDDHLILEDESGRVTLAGAIPPAAYV 126
>02_02_0379 +
9565001-9565515,9565553-9565833,9565884-9566084,
9566253-9566309,9566955-9567019,9567199-9567420
Length = 446
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 248 WRLPARWSLPSRRSVSPGWSIPAGRICA-PSAWLP 349
+RL RW P R S++P + P + A P A +P
Sbjct: 150 YRLSPRWRSPDRLSITPTTAAPPATVLASPHAPMP 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,241,307
Number of Sequences: 37544
Number of extensions: 339168
Number of successful extensions: 1166
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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