Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9e21
         (328 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical...    27   3.2  
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr...    26   5.6  
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra...    26   5.6  
Z82285-7|CAB05301.1|  548|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U39648-4|AAK39290.1|  220|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
            protein F25E5.1 protein.
          Length = 1062

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +2

Query: 65   YEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYXRSLTDRWSRALYQRDMRLTGNPYEVN 244
            Y I+   FI     G+  W    I N  +  H+ R +T+ W +  ++R  R+    +  N
Sbjct: 897  YPIMTQRFIAQYRPGIILWHRSPIPNPQI--HHVRIITEMWPKNDFERTTRIPRKKFIKN 954

Query: 245  GL 250
            G+
Sbjct: 955  GI 956


>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
           protein ZC101.2f protein.
          Length = 2389

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
           protein ZC101.2e protein.
          Length = 3375

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
           protein ZC101.2c protein.
          Length = 2295

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
           protein ZC101.2a protein.
          Length = 2482

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
           protein ZC101.2b protein.
          Length = 1160

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
           protein ZC101.2f protein.
          Length = 2389

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
           protein ZC101.2e protein.
          Length = 3375

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
           protein ZC101.2c protein.
          Length = 2295

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
           protein ZC101.2a protein.
          Length = 2482

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
           proteoglycan protein.
          Length = 2481

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 161 NDCLKSDYVYDKDPSPVDQQQQ 96
           N+C+K+DYV D +P   D+  +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180


>Z82285-7|CAB05301.1|  548|Caenorhabditis elegans Hypothetical
           protein T28F3.8 protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 86  FIITAAVGLPGWGLYHIHN 142
           F IT +VGL GWG ++  N
Sbjct: 269 FTITISVGLNGWGNFNYTN 287


>U39648-4|AAK39290.1|  220|Caenorhabditis elegans Hypothetical
           protein T13C5.4 protein.
          Length = 220

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 191 RALYQRDMRLTGNPYE 238
           RA Y+R+ + TG+PYE
Sbjct: 96  RAKYRREQKQTGHPYE 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,279,568
Number of Sequences: 27780
Number of extensions: 131221
Number of successful extensions: 281
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)