Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9e19
(671 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 140 1e-33
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 100 2e-21
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 94 8e-20
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 83 1e-16
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907... 71 6e-13
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 71 1e-12
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 36 0.022
04_04_0667 + 27097741-27098085,27098203-27098547 35 0.068
02_05_0134 + 26161904-26162776 35 0.068
10_06_0180 + 11526139-11526172,11526365-11527218 33 0.21
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 31 1.1
03_01_0630 + 4635297-4636220 30 1.5
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 30 1.9
09_06_0034 + 20370672-20371109,20371120-20371515 29 4.5
04_04_0686 - 27249140-27249220,27249387-27249480,27249922-272499... 28 7.8
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 28 7.8
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 140 bits (338), Expect = 1e-33
Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 20/238 (8%)
Frame = +3
Query: 18 EYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKG 197
E+ G+ ++EP+SGSD ++K A+K Y+I+G+KMW +N A +V D + G
Sbjct: 146 EHVGALAMSEPNSGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAG 205
Query: 198 YKGITCFIVERETPGLSVAKPENKLGIRASGTCMVHFDNVKVHESSILGEXXXXXXXXXX 377
KGIT FI+E+ PG S A+ +KLG+R S TC + F+N V ++LGE
Sbjct: 206 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMS 265
Query: 378 FLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQ------------- 518
L+ R+ +AA IGL Q C+D +PY +R+QFG+ I EFQ I Q
Sbjct: 266 GLDLERLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQVQHFVNRRLVPTITS 325
Query: 519 -------IAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCI 671
+A + T L+++R Y+ AR ++G K+ A FA+E A + + I
Sbjct: 326 YLLMQGKLADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFAAERATQVALQAI 383
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 99.5 bits (237), Expect = 2e-21
Identities = 69/212 (32%), Positives = 99/212 (46%)
Frame = +3
Query: 27 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKG 206
G + LTEP+ GSDA +L T A K + I G K WI NS A V +V+ +K G
Sbjct: 165 GCWALTEPNHGSDASSLITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNANTKQLNG 224
Query: 207 ITCFIVERETPGLSVAKPENKLGIRASGTCMVHFDNVKVHESSILGEXXXXXXXXXXFLN 386
FIV + PGL K ENK+G+R + F+ V V E L L
Sbjct: 225 ---FIVRKGAPGLKATKIENKIGLRMVQNGDIVFNKVFVPEEDRL-PGVNSFQDISKVLA 280
Query: 387 EGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTY 566
R+ +A Q IG+ G D Y ERKQFG + FQ ++ + ++A L+ +
Sbjct: 281 ISRVMVAWQPIGISMGVFDVCHRYLKERKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGW 340
Query: 567 NAARLKEHGHEFVKEAAMAKYFASEIAQTLTS 662
+L E G A++ K + S +A+ + S
Sbjct: 341 RLCKLYESGKMTPGHASLGKGWTSRMAREVVS 372
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 94.3 bits (224), Expect = 8e-20
Identities = 64/212 (30%), Positives = 97/212 (45%)
Frame = +3
Query: 27 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKG 206
G + LTEP GSDA +L+T A K + + G K WI N A V +++ + G
Sbjct: 142 GCWALTEPDYGSDASSLRTAATKVPGGWHLDGQKRWIGNGTFADVLIILARNSDTNQLNG 201
Query: 207 ITCFIVERETPGLSVAKPENKLGIRASGTCMVHFDNVKVHESSILGEXXXXXXXXXXFLN 386
FIV++ PGL K ENK+G+R + + V V + L L
Sbjct: 202 ---FIVKKGAPGLKCTKIENKIGLRMVQNADIVLNKVFVPDEDRL-TGINSFQDINKVLA 257
Query: 387 EGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTY 566
RI +A Q IG+ G D Y ERKQFG + FQ ++ + ++A L+ +
Sbjct: 258 MSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAMLLVGW 317
Query: 567 NAARLKEHGHEFVKEAAMAKYFASEIAQTLTS 662
+L E G A++ K + S+ A+ + S
Sbjct: 318 RLCKLYESGKMTPGHASLGKAWTSKKAREVVS 349
>07_03_1669 + 28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 83.4 bits (197), Expect = 1e-16
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 8/213 (3%)
Frame = +3
Query: 33 FCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKMWISNS--DVAGVFLVMTNADPSKG-Y 200
F +TEP + SDA ++ ++G+ Y+I+G+K W S + + ++M D S +
Sbjct: 530 FAMTEPQVASSDATNIECSISRQGDFYVINGTKWWTSGAMDPRCQILVLMGKTDFSAPKH 589
Query: 201 KGITCFIVERETPGLSVAKPENKLGIRAS--GTCMVHFDNVKVHESSILGEXXXXXXXXX 374
K + +V+ +TPG+ + +P G + G + F+NV+V ++IL
Sbjct: 590 KQQSMILVDVKTPGVQIRRPLLVFGFDDAPHGHAEITFENVRVPATNILLGEGRGFEIAQ 649
Query: 375 XFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAAR 554
L GR+ ++IG + M+ + L R FGKKI + +A + +LE AR
Sbjct: 650 GRLGPGRLHHCMRLIGAAERGMNLMVERALSRTTFGKKIAQHGSFLADLAKCRVELEQAR 709
Query: 555 LLTYNAA-RLKEHGHEFVKE-AAMAKYFASEIA 647
LL AA +L HG++ + AMAK A +A
Sbjct: 710 LLVLEAADQLDRHGNKKARGILAMAKVAAPNMA 742
>06_02_0285 +
13789900-13790071,13790407-13790525,13790642-13790751,
13790887-13791046,13791407-13791483,13792299-13792470,
13792580-13792672,13793617-13793733
Length = 339
Score = 71.3 bits (167), Expect = 6e-13
Identities = 49/181 (27%), Positives = 85/181 (46%)
Frame = +3
Query: 108 YIISGSKMWISNSDVAGVFLVMTNADPSKGYKGITCFIVERETPGLSVAKPENKLGIRAS 287
+I++G K W +N A VF+V+ + G FIV +PGL ++K ENK +R
Sbjct: 102 WILNGQKRWPANGSFADVFVVLACNTSNNQING---FIVNGGSPGLKISKIENKTSLRVV 158
Query: 288 GTCMVHFDNVKVHESSILGEXXXXXXXXXXFLNEGRIGIAAQMIGLCQGCMDATIPYTLE 467
C + ++V V + L L+ + +A IG+ G DA + Y E
Sbjct: 159 QNCDILLEDVFVPDDDRL-PGANSFQDLVKALSFSCVIVAWISIGIAAGVYDACLRYLGE 217
Query: 468 RKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIA 647
RKQFG + FQ ++ + ++A LL + +L + G +A++ K + ++ A
Sbjct: 218 RKQFGAPLAAFQLNQEKLVRMLGNIQAMWLLGWRLCKLHDSGRMTTGQASLGKAWITKQA 277
Query: 648 Q 650
+
Sbjct: 278 R 278
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 70.5 bits (165), Expect = 1e-12
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Frame = +3
Query: 33 FCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKGIT 212
+ L+EP+ GSDA +L T A+K +I++G K W +NS A +F+V+ + G
Sbjct: 178 YALSEPNHGSDASSLNTTARKVPGGWILNGQKRWPANSSFADIFVVLACNTSTNQING-- 235
Query: 213 CFIVERETPGLSVAKPENKLGIRASGTCMVHF------------------DNVKVHESS- 335
FIV PGL ++K +NK+ +R C + D VK++ S
Sbjct: 236 -FIVNGGAPGLKISKIDNKMSLRVVQNCDILLEDVFVPDDDRLPGANSFQDLVKIYSISP 294
Query: 336 -ILGE-XXXXXXXXXXFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQ 503
+G+ L+ R+ +A IG+ G DA + Y ERKQFG + FQ
Sbjct: 295 HTIGDTDLTDYVAYIQALSFSRVIVAWISIGIAAGVYDACLRYLGERKQFGAPLAAFQ 352
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 36.3 bits (80), Expect = 0.022
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Frame = +3
Query: 18 EYAGSFCLTEPSSGSDAFALKTVAKKE--GEHYIIS-----GSKMWISNSDVAGVF---- 164
+Y G F +TE GS+ AL+T A + + +II+ K WI N+ + G F
Sbjct: 184 DYPGCFAMTELHHGSNVQALQTTATFDPVTDEFIINTPNDGAIKWWIGNAALHGKFATVF 243
Query: 165 ----LVMTNADPSKGYKGITCFIV---ERET----PGLSVAKPENKLGIRASGTCMVHFD 311
L + GI FIV + +T PG+ + +K+G+ + F
Sbjct: 244 ARLILPLQGKGGDPADMGIHAFIVPIRDLDTNAVLPGIEINDCGHKIGLNGVDNGALRFR 303
Query: 312 NVKVHESSIL---GEXXXXXXXXXXF--LNE-----------GRIGIAAQMIGLCQGCMD 443
+V++ ++L G+ +N+ GR+GIA +G+ + +
Sbjct: 304 SVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGIAYSSVGILKVSVT 363
Query: 444 ATIPYTLERKQFG-KKIYEFQGISYQ 518
+ Y L R+QFG K E + YQ
Sbjct: 364 IAVRYALLRQQFGPPKKPEISVLDYQ 389
>04_04_0667 + 27097741-27098085,27098203-27098547
Length = 229
Score = 34.7 bits (76), Expect = 0.068
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 362 QVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKED--LRVSGHQLPNR 523
QV WF +R+ W + + L + D+LH+R E++++E L V H+L R
Sbjct: 67 QVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRER 122
>02_05_0134 + 26161904-26162776
Length = 290
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 362 QVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVS 502
QV WF +R+ W + + L + D+LH R E++R+E L ++
Sbjct: 105 QVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALA 151
>10_06_0180 + 11526139-11526172,11526365-11527218
Length = 295
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 323 ARIEYPWRIWQRVQVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKE 487
ARI R+ R QV WF RR+ W +R + L R+D+L + +R++
Sbjct: 83 ARIARDLRLHPR-QVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRD 136
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Frame = +3
Query: 27 GSFCLTEPSSGSDAFALKTVAKKE--GEHYII-----SGSKMWISNS-DVAGVFLVMTNA 182
G F +TE GS+ ++TVA + ++I S K WI + + A +V
Sbjct: 192 GCFSMTELGHGSNVRGIETVATYDIKTREFVINTPCESAQKYWIGGAANHATHTIVFAQL 251
Query: 183 DPSKGYKGITCFIV------ERETPGLSVAKPENKLGIRASGTCMVHFDNVKVHESSIL 341
+ +G+ F+ E P + +A +K+G+ + F+N++V ++L
Sbjct: 252 HINGRNEGVHAFVAQIRDEHENVMPNIQIADCGHKIGLNGVDNGRIWFNNIRVPRENLL 310
>03_01_0630 + 4635297-4636220
Length = 307
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 362 QVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKE 487
QV WF RR+ W +R + L R+D+L + +R++
Sbjct: 82 QVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRD 123
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 401 YRGSDDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTPADTVG 544
++G+DDRS +Y D + +I ++ + V GH L +T T+G
Sbjct: 391 HKGADDRSFRSVYQEEDEQRIKGLSISRDLVEVGGHAL--KTNITTLG 436
>09_06_0034 + 20370672-20371109,20371120-20371515
Length = 277
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 362 QVRGWFLERRSDWYRGSDDRSVSGLYGRNDSLHTRKETIRKEDL 493
QV WF +R+ W +R S L D+L E+++KE L
Sbjct: 70 QVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKL 113
>04_04_0686 -
27249140-27249220,27249387-27249480,27249922-27249987,
27250068-27250158,27250378-27250460,27250565-27250633,
27250971-27251038,27251118-27251204,27252998-27253069,
27253469-27253527,27253663-27253780,27254411-27254466,
27254892-27254937,27255011-27255052,27255837-27255922,
27256039-27256087
Length = 388
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 263 KQIRHQSFGHMHGTFRQCEGARIEYPWRIWQRVQVRGWFLERRSDWYRGSDDRSVSG 433
K + +F M G R CE EYPWR + ++ + R+ Y ++ R +SG
Sbjct: 285 KIVHIDAFTAMSGVSRFCES---EYPWRYSKEEKISIEEYQERNFTYLLNEHRHISG 338
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -3
Query: 489 SSFRIVSFLVCKESLRPYSPDTDRSSE-PRYQSDLRSRNQPRTC 361
S RI F VC ES+R Y P D E R S R R C
Sbjct: 164 SRVRIGRFPVCPESMREYIPCLDNEEEIRRLPSTERGERFERHC 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,182,646
Number of Sequences: 37544
Number of extensions: 380464
Number of successful extensions: 1038
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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