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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9e18
         (608 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...   228   4e-61
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...   228   4e-61
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...   171   5e-44
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    99   6e-22
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    88   8e-19
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    87   2e-18
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    87   3e-18
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    49   6e-07
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...    36   0.006
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...    36   0.006
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...    35   0.008
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    34   0.014
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    31   0.17 
SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24 famil...    28   1.2  
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...    28   1.2  
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...    27   2.1  
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar...    25   6.5  
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    25   8.7  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    25   8.7  

>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score =  228 bits (558), Expect = 4e-61
 Identities = 115/174 (66%), Positives = 137/174 (78%), Gaps = 1/174 (0%)
 Frame = +3

Query: 87  MXNFTVXXIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXR 266
           M  FT   +R +M K  N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF D R
Sbjct: 1   MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60

Query: 267 KDEQXRCITIKSTAISMFFELEXKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 443
            DEQ R +TIKSTAIS+F E+   D+      D +E ++   FL+NLIDSPGHVDFSSEV
Sbjct: 61  ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115

Query: 444 TAALRVTDGALXVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQL 605
           TAALRVTDGAL VVD + GVCVQTETVLRQA+ ERI+P++ +NK+DRALLELQ+
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQI 169


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score =  228 bits (558), Expect = 4e-61
 Identities = 115/174 (66%), Positives = 137/174 (78%), Gaps = 1/174 (0%)
 Frame = +3

Query: 87  MXNFTVXXIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXR 266
           M  FT   +R +M K  N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF D R
Sbjct: 1   MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60

Query: 267 KDEQXRCITIKSTAISMFFELEXKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 443
            DEQ R +TIKSTAIS+F E+   D+      D +E ++   FL+NLIDSPGHVDFSSEV
Sbjct: 61  ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115

Query: 444 TAALRVTDGALXVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQL 605
           TAALRVTDGAL VVD + GVCVQTETVLRQA+ ERI+P++ +NK+DRALLELQ+
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQI 169


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score =  171 bits (417), Expect = 5e-44
 Identities = 90/162 (55%), Positives = 118/162 (72%)
 Frame = +3

Query: 120 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCITIK 299
           +   + NIRN +++AHVDHGK+TL DSL++  GII+   AG  RF D R+DE  R IT+K
Sbjct: 12  LQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMK 71

Query: 300 STAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALX 479
           S+AIS+FF++       I+  D++ + EK +LINLIDSPGHVDFSSEV++A R+ DGA  
Sbjct: 72  SSAISLFFKV-------ISQNDEK-RVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFV 123

Query: 480 VVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQL 605
           +VD V GVC QT TVLRQA  +RIK IL +NKMDR + EL+L
Sbjct: 124 LVDAVEGVCSQTITVLRQAWIDRIKVILVINKMDRLITELKL 165


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 98.7 bits (235), Expect = 6e-22
 Identities = 65/160 (40%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
 Frame = +3

Query: 126 DKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA--GETRF---TDXRKDEQXR 284
           DKKR   IRN+ + AH+D GK+T T+ ++   G I       G+       D  + E+ +
Sbjct: 52  DKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREK 111

Query: 285 CITIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVT 464
            ITI+S A    +E     +    N  Q+   EK + IN+ID+PGH+DF+ EV  ALRV 
Sbjct: 112 GITIQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVL 169

Query: 465 DGALXVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDR 584
           DGA+ V+  VSGV  QT TV RQ     +  I F+NKMDR
Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 88.2 bits (209), Expect = 8e-19
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
 Frame = +3

Query: 117 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAGETRFTDXRKDEQXRCIT 293
           G++    ++R+  V  H+ HGKS L D LV          +    R+TD    E+ R ++
Sbjct: 132 GLLTGTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMS 191

Query: 294 IKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 473
           IKST +++               D + K+   F    ID+PGHVDF  EV A + ++DG 
Sbjct: 192 IKSTPLTLAVS------------DMKGKT---FAFQCIDTPGHVDFVDEVAAPMAISDGV 236

Query: 474 LXVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQL 605
           + VVD + GV + T  +++ AI   +  +L +NK+DR +LEL+L
Sbjct: 237 VLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRL 280


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 87.0 bits (206), Expect = 2e-18
 Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = +3

Query: 138 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT--DXRKDEQXRCITIKSTAI 311
           +IRN+ +IAH+D GK+TLT+ ++   G  +     +T  T  D    E+ R ITI S AI
Sbjct: 27  SIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAI 86

Query: 312 SMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDC 491
           S  +             +QR        INLID+PGH DF+ EV  ++ V DGA+ ++D 
Sbjct: 87  SFTWR------------NQR--------INLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126

Query: 492 VSGVCVQTETVLRQAIAERIKPILFMNKMDR 584
            +GV  QT+ V +QA    I  ++F+NKMDR
Sbjct: 127 SAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 86.6 bits (205), Expect = 3e-18
 Identities = 52/157 (33%), Positives = 84/157 (53%)
 Frame = +3

Query: 111 IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCI 290
           +RG+   +  +RN +VIAH+DHGKSTL+D ++   G+I        +F D  + E+ R I
Sbjct: 50  VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGI 106

Query: 291 TIKSTAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 470
           T+K+   SM +    +                 +L+NLID+PGHVDF +EV  +L   +G
Sbjct: 107 TVKAQTCSMIYYYHGQS----------------YLLNLIDTPGHVDFRAEVMHSLAACEG 150

Query: 471 ALXVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMD 581
            + +VD   G+  QT +    A ++ +  I  +NK+D
Sbjct: 151 CILLVDASQGIQAQTLSNFYMAFSQNLVIIPVLNKVD 187


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 48.8 bits (111), Expect = 6e-07
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
 Frame = +3

Query: 129 KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCITIKSTA 308
           KK ++ N+  I HVDHGK+TLT ++      +  A   +    D   +E+ R ITI S  
Sbjct: 50  KKPHV-NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAH 108

Query: 309 ISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVD 488
           +   +E   +    +                  D PGH D+   +       DGA+ VV 
Sbjct: 109 VE--YETANRHYAHV------------------DCPGHADYIKNMITGAATMDGAIIVVS 148

Query: 489 CVSGVCVQTETVLRQAIAERIKPI-LFMNKMD 581
              G   QT   L  A    +K I +++NK+D
Sbjct: 149 ATDGQMPQTREHLLLARQVGVKQIVVYINKVD 180


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 33/121 (27%), Positives = 57/121 (47%)
 Frame = +3

Query: 123 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCITIKS 302
           M K++   N+ VI HVD GKST T  L+ K G I   R  E +F   ++  +    + K 
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF--EKEATELGKGSFKY 56

Query: 303 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXV 482
             +    + E +  + I     + ++ K + + +ID+PGH DF   +       D A+ +
Sbjct: 57  AWVLDKLKAERERGITIDIALWKFETPK-YNVTVIDAPGHRDFIKNMITGTSQADCAILI 115

Query: 483 V 485
           +
Sbjct: 116 I 116


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 33/121 (27%), Positives = 57/121 (47%)
 Frame = +3

Query: 123 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCITIKS 302
           M K++   N+ VI HVD GKST T  L+ K G I   R  E +F   ++  +    + K 
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF--EKEATELGKGSFKY 56

Query: 303 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXV 482
             +    + E +  + I     + ++ K + + +ID+PGH DF   +       D A+ +
Sbjct: 57  AWVLDKLKAERERGITIDIALWKFETPK-YNVTVIDAPGHRDFIKNMITGTSQADCAILI 115

Query: 483 V 485
           +
Sbjct: 116 I 116


>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score = 35.1 bits (77), Expect = 0.008
 Identities = 33/121 (27%), Positives = 57/121 (47%)
 Frame = +3

Query: 123 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCITIKS 302
           M K++   N+ VI HVD GKST T  L+ K G I   R  E +F   ++  +    + K 
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF--EKEATELGKGSFKY 56

Query: 303 TAISMFFELEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXV 482
             +    + E +  + I     + ++ K + + +ID+PGH DF   +       D A+ +
Sbjct: 57  AWVLDKLKAERERGITIDIALWKFETPK-YNVTVIDAPGHRDFIKNMITGTSQADCAVLI 115

Query: 483 V 485
           +
Sbjct: 116 I 116


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 34.3 bits (75), Expect = 0.014
 Identities = 17/61 (27%), Positives = 35/61 (57%)
 Frame = +3

Query: 402 LIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMD 581
           +ID+PGH  F++  +    + + A+ V+D + G+  QT   +R    ++   ++ +NK+D
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIRLLRDQKTPFVVALNKVD 612

Query: 582 R 584
           R
Sbjct: 613 R 613


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 30.7 bits (66), Expect = 0.17
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +3

Query: 396 INLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQAIAERIKPILFMNK 575
           I  +D+PGH+ F +       + D  + VV    GV  QT   ++   +  +  ++ + K
Sbjct: 222 ITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIKHIQSADVPVVVALTK 281

Query: 576 MDR 584
            DR
Sbjct: 282 SDR 284



 Score = 28.7 bits (61), Expect = 0.70
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = +3

Query: 150 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR----FTDXRKDEQXRCITIKSTAISM 317
           ++++ HVDHGK+TL D+   K+ I +    G T+    FT    D+  + IT   T   M
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQKIGAFT-VPFDKGSKFITFLDTPGHM 231

Query: 318 FFELEXK 338
            FE   K
Sbjct: 232 AFEAMRK 238


>SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 195

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 143 DIPLLVHHPXDXVYREIXHFRWFMIFVLLNQLPYASNGVRF 21
           DIPL +  P D + RE  + RW  + +L   + Y ++   F
Sbjct: 102 DIPLRLIQPYDPLSRETVYMRWKELAMLDKTVDYQNHNQSF 142


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 28/114 (24%), Positives = 48/114 (42%)
 Frame = +3

Query: 147 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCITIKSTAISMFFE 326
           ++ V  HVD GKST+   ++ + G I  +R+ +    +     +       +  +    E
Sbjct: 179 HLVVTGHVDSGKSTMLGRIMFELGEI-NSRSMQKLHNEAANSGKGSFSY--AWLLDTTEE 235

Query: 327 LEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVD 488
              + +         E  +K + I   D+PGH DF S + A     D A+ VVD
Sbjct: 236 ERARGVTMDVASTTFESDKKIYEIG--DAPGHRDFISGMIAGASSADFAVLVVD 287


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 28/118 (23%), Positives = 46/118 (38%)
 Frame = +3

Query: 147 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDXRKDEQXRCITIKSTAISMFFE 326
           N+  I HVD GKSTL  +++   G++   R  E    +    E  +     S A+    E
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV-DKRTMEK--IEREAKEAGKESWYLSWALDSTSE 296

Query: 327 LEXKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 500
              K           E   + F  +L+D+PGH  + + +       D  + V+    G
Sbjct: 297 EREKGKTVEVGRAYFETEHRRF--SLLDAPGHKGYVTNMINGASQADIGVLVISARRG 352


>SPBC19F5.03 |||inositol polyphosphate phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 143 DIPLLVHHPXDXVYREIXHFRWFMIFVLLNQL 48
           D P + +H  D  ++E  H RW  + +LLN++
Sbjct: 318 DNPHIHYHYFDF-HKECSHMRWDRVSLLLNEI 348


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 147 NMSVIAHVDHGKSTLTDSL 203
           N+  I HV HGKST+  ++
Sbjct: 25  NIGTIGHVAHGKSTVVKAI 43


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 480 VVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLE 608
           +V  VSGV    E ++   I   ++  +F+N   R L+++ ++
Sbjct: 48  LVQPVSGVAETLEKMISSRIVGILEDAIFLNTYPRTLIQVSIQ 90


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,195,203
Number of Sequences: 5004
Number of extensions: 39156
Number of successful extensions: 141
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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