Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9e08
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         25   2.7  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   2.7  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     25   2.7  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     25   2.7  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   3.6  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   6.3  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   8.4  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   8.4  

>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -1

Query: 145 TFTFSHFNHFFITKCLNHDTPSI-CNRIW----LQYSWLLSHVKF 26
           T+   ++N+F+  + LN++T  I  N  +    + YS+LL   KF
Sbjct: 207 TYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKF 251


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 246 SNISSRVRSTLPR--FCRSFSLARPACFCTVFA 154
           + IS+ VRS+LPR  + ++  +    CF  VFA
Sbjct: 266 TTISTGVRSSLPRISYVKAIDIYLVMCFVFVFA 298


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -1

Query: 145 TFTFSHFNHFFITKCLNHDTPSI-CNRIW----LQYSWLLSHVKF 26
           T+   ++N+F+  + LN++T  I  N  +    + YS+LL   KF
Sbjct: 207 TYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKF 251


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -1

Query: 145 TFTFSHFNHFFITKCLNHDTPSI-CNRIW----LQYSWLLSHVKF 26
           T+   ++N+F+  + LN++T  I  N  +    + YS+LL   KF
Sbjct: 207 TYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKF 251


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 387 AAGQVTTCCTSKLRTWRSFGRTSR 458
           AAG V     S+LR W+ F   +R
Sbjct: 445 AAGVVAPLLASRLREWKPFSEPTR 468


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 254 GALRIYHREFGR 219
           G+ R+YHR FGR
Sbjct: 226 GSFRVYHRCFGR 237


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -2

Query: 240 ISSRVRSTLPRFCRSFSLARPACFCTVFAINAPLLSAISITFSLP 106
           I  R RS     CR+  L R      ++  +A   + ++ TF+LP
Sbjct: 12  IFPRWRSAQTSLCRTILLQRNVRNLRLYETDASFEARLNATFNLP 56


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -1

Query: 145 TFTFSHFNHFFITKCLNHDTPSI-CNRIW----LQYSWLLSHVKF 26
           T+   ++N+F+  + LN+ T  I  N  +    + YS+LL   KF
Sbjct: 207 TYPMDYYNNFYTEEYLNYYTEDIGLNAYYYYFMMDYSFLLGGDKF 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,435
Number of Sequences: 2352
Number of extensions: 14207
Number of successful extensions: 43
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)