Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9e08
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 129 2e-30
Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical pr... 35 0.058
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 34 0.10
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.71
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 31 0.71
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.71
U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical pr... 31 0.94
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 31 0.94
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 30 1.6
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 30 1.6
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 30 1.6
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 30 1.6
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 30 1.6
U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of p... 30 1.6
AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of... 30 1.6
AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of... 30 1.6
AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin pr... 29 2.2
AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated... 29 2.2
AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated... 29 2.2
AF016444-12|AAB65927.2| 295|Caenorhabditis elegans Serpentine r... 29 2.2
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 29 3.8
Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 28 5.0
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 28 5.0
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 28 5.0
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 28 5.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 6.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 6.6
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 28 6.6
AF016415-2|AAW88413.1| 296|Caenorhabditis elegans Serpentine re... 28 6.6
Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 8.7
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 8.7
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 8.7
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical ... 27 8.7
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 27 8.7
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 27 8.7
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 129 bits (311), Expect = 2e-30
Identities = 61/168 (36%), Positives = 99/168 (58%)
Frame = +2
Query: 149 LIAKTVQKHAGRAKEKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQSTRLQKEFNNYIRCI 328
L K ++K R KEKLL+ +GK T D++F++H N N+Q + +L K+ NY +
Sbjct: 4 LFNKHLKKATNRTKEKLLEGIGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSAL 63
Query: 329 RAAQTASKSLMEAITEVYESGWSGHDLLYVQAQNMEVLWQDFSHKLGDQVLIPLNTYTNQ 508
R +A K L + I + YE W + L N+++ + + D + + Y NQ
Sbjct: 64 RTLLSAEKQLRDTIRDAYEPEWPDREHLTAIFDNLDIQTNELEKTVCDDLPQTVTQYVNQ 123
Query: 509 FPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGREQL 652
FP+++KKIEKRGRKLVDYDS ++SF +++A ++K+ +D K+ K +L
Sbjct: 124 FPDLKKKIEKRGRKLVDYDSAKNSFNSVKA-SSKKDNDPKLAKATMEL 170
>Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical
protein F54C8.7b protein.
Length = 307
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +2
Query: 185 AKEKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQTASKSLME 364
+K++LL+++GK+D+T+D FE + H++ + N+ + A K L E
Sbjct: 77 SKQQLLEHMGKIDKTVDPEFEAQCEVLKDIHRRYGLVVAAAKNFSHVLTQMAEAEKKLSE 136
Query: 365 AITEV 379
+ ++
Sbjct: 137 SFYQL 141
>Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical
protein F54C8.7a protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +2
Query: 185 AKEKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQTASKSLME 364
+K++LL+++GK+D+T+D FE + H++ + N+ + A K L E
Sbjct: 58 SKQQLLEHMGKIDKTVDPEFEAQCEVLKDIHRRYGLVVAAAKNFSHVLTQMAEAEKKLSE 117
Query: 365 AITEV 379
+ ++
Sbjct: 118 SFYQL 122
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 185 AKEKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQTASKSLME 364
AKE++LQ+ K+ + L+D E L+N H+ S + QK+F + + R A K+L++
Sbjct: 1411 AKERILQSKKKIQQELEDSSME-LENVRASHRDSEKRQKKFESQMAEERVA--VQKALLD 1467
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 0.54
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +3
Query: 228 LSMIYSKSTYRISTDSTSSPPGCRRSSTIT 317
+ +IY+ ST + T++T+ GC+++STI+
Sbjct: 724 MQLIYTPSTNKTRTETTTDTEGCKKTSTIS 753
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 228 LSMIYSKSTYRISTDSTSSPPGCRRSST 311
+ +IY+ ST + T++TS GC+ +ST
Sbjct: 1043 MQLIYNPSTNKTRTETTSDAQGCKATST 1070
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 228 LSMIYSKSTYRISTDSTSSPPGCRRSST 311
+ +IY+ ST + T++T+ GC+++S+
Sbjct: 807 MQLIYNPSTNKTRTETTTDAEGCKKTSS 834
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.1 bits (67), Expect = 0.71
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 11/162 (6%)
Frame = +2
Query: 107 GNEKVIEMAES---KGALIAKTVQKHAGRAKEKLLQNLGKVDRTLDDIFEEHLQNFNRQH 277
G +V E++E + + + V + K+K+ + + ++ +D ++ N +
Sbjct: 2591 GERRVEELSEEVVRQELQVLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLL 2650
Query: 278 QQSTRLQKEFNNYIRCIRAAQTAS----KSLMEAITEVYESGWSGHD----LLYVQAQNM 433
+ +FN+ IR RA AS + A++E +E S + L N
Sbjct: 2651 SRLNMSWTKFNDNIRIRRAVLEASLRSRRDFHSALSE-FEKWLSRQEDNCSKLSADTSNH 2709
Query: 434 EVLWQDFSHKLGDQVLIPLNTYTNQFPEVRKKIEKRGRKLVD 559
+ + K Q LN N +V K +EK G+ L +
Sbjct: 2710 QAIKDTSKRKNWTQSFKTLNAELNAHEDVMKSVEKMGKMLAE 2751
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.1 bits (67), Expect = 0.71
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 11/162 (6%)
Frame = +2
Query: 107 GNEKVIEMAES---KGALIAKTVQKHAGRAKEKLLQNLGKVDRTLDDIFEEHLQNFNRQH 277
G +V E++E + + + V + K+K+ + + ++ +D ++ N +
Sbjct: 2591 GERRVEELSEEVVRQELQVLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLL 2650
Query: 278 QQSTRLQKEFNNYIRCIRAAQTAS----KSLMEAITEVYESGWSGHD----LLYVQAQNM 433
+ +FN+ IR RA AS + A++E +E S + L N
Sbjct: 2651 SRLNMSWTKFNDNIRIRRAVLEASLRSRRDFHSALSE-FEKWLSRQEDNCSKLSADTSNH 2709
Query: 434 EVLWQDFSHKLGDQVLIPLNTYTNQFPEVRKKIEKRGRKLVD 559
+ + K Q LN N +V K +EK G+ L +
Sbjct: 2710 QAIKDTSKRKNWTQSFKTLNAELNAHEDVMKSVEKMGKMLAE 2751
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +3
Query: 399 VTTCCTSKLRTWRSFGRTSRTNSATKYSYRSTRIRTNSPKSGKKSRNVVANS*TTTVKGT 578
+ T R + GRT+ + + YR+TR + N KS + VVA+S T V+ T
Sbjct: 868 INTATDDIARLIKQDGRTALVIVSLLHDYRTTREQNNRAKSTTGEQPVVADS--TAVEVT 925
Query: 579 ASRTYRRMPLKEGTT 623
+ R GTT
Sbjct: 926 KKKAPARKRNANGTT 940
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.1 bits (67), Expect = 0.71
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 11/162 (6%)
Frame = +2
Query: 107 GNEKVIEMAES---KGALIAKTVQKHAGRAKEKLLQNLGKVDRTLDDIFEEHLQNFNRQH 277
G +V E++E + + + V + K+K+ + + ++ +D ++ N +
Sbjct: 2591 GERRVEELSEEVVRQELQVLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLL 2650
Query: 278 QQSTRLQKEFNNYIRCIRAAQTAS----KSLMEAITEVYESGWSGHD----LLYVQAQNM 433
+ +FN+ IR RA AS + A++E +E S + L N
Sbjct: 2651 SRLNMSWTKFNDNIRIRRAVLEASLRSXRDFHSALSE-FEKWLSRQEDNCSKLSADTSNH 2709
Query: 434 EVLWQDFSHKLGDQVLIPLNTYTNQFPEVRKKIEKRGRKLVD 559
+ + K Q LN N +V K +EK G+ L +
Sbjct: 2710 QAIKDTSKRKNWTQSFKTLNAELNAHEDVMKSVEKMGKMLAE 2751
>U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical
protein C01G5.3 protein.
Length = 479
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 524 KKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKG 640
KK+EK +K D DS+ F+ Q +A K +DV+ +KG
Sbjct: 61 KKVEKMKKKKKD-DSRTEDFREQQEDAVKDDEDVQPSKG 98
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 30.7 bits (66), Expect = 0.94
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +3
Query: 450 TSRTNSATKYSYRSTRIRTNSPKSGKKSRNVVANS*TTTVKGTASRTYR 596
TS+T SAT RSTRI TN PKS K +V S + ++G TY+
Sbjct: 8 TSKTVSATPVKRRSTRI-TNLPKSAPK---IVKRS-SVRLRGAPQCTYK 51
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 253 PTEFQPTAPAVHQVAEGVQQLHKMYTSGADSFEVADGSDHGGLRERLVRSRPAVR-PSSE 429
P P P +A G+ Q+ T+G + + GS + R SRPA + PS +
Sbjct: 540 PAPQLPNLPESFLMAHGLSQIQTSSTAGPSNSSMNHGSGNQQFRMGQSSSRPAPQLPSLQ 599
Query: 430 HGGPLAGLLAQTRRPST 480
+A +AQ ST
Sbjct: 600 ESFLMAHGIAQVETSST 616
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 497 YTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGRE 646
Y + +++++I++ KL + + +RHS QNL+ + + KV K E
Sbjct: 292 YASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEKRNE 341
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 497 YTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGRE 646
Y + +++++I++ KL + + +RHS QNL+ + + KV K E
Sbjct: 326 YASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEKRNE 375
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 497 YTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGRE 646
Y + +++++I++ KL + + +RHS QNL+ + + KV K E
Sbjct: 423 YASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEKRNE 472
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 497 YTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGRE 646
Y + +++++I++ KL + + +RHS QNL+ + + KV K E
Sbjct: 486 YASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEKRNE 535
>U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of
presenilin defectprotein 1 protein.
Length = 558
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 467 GDQVLIPLNTYTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRR 616
G + IP T PEV + LVD DS R S Q + + +KR+
Sbjct: 27 GPETDIPAETIEENVPEVEENTLLEEDSLVDVDSPRPSQQRSKPSKSKRK 76
>AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of
presenilin 1 protein.
Length = 558
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 467 GDQVLIPLNTYTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRR 616
G + IP T PEV + LVD DS R S Q + + +KR+
Sbjct: 27 GPETDIPAETIEENVPEVEENTLLEEDSLVDVDSPRPSQQRSKPSKSKRK 76
>AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of
presenilin defect protein.
Length = 558
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 467 GDQVLIPLNTYTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRR 616
G + IP T PEV + LVD DS R S Q + + +KR+
Sbjct: 27 GPETDIPAETIEENVPEVEENTLLEEDSLVDVDSPRPSQQRSKPSKSKRK 76
>AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin
protein.
Length = 377
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +2
Query: 164 VQKHAGRAKEKLLQNLGKVDRT-LDDIFEEHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQ 340
++K +A + L + +G + T LDD+F E +N + + T L N Y++ A
Sbjct: 6 LRKQFNKANQYLSETMGAAEPTKLDDVFNEMEKNVDTTYNLITDLVAGTNEYLQ-PNPAT 64
Query: 341 TASKSLMEAITEVYESGWSGHDLLYVQAQNMEV-LWQDFSHKLGD 472
A + A+++V + + Y Q + M + Q + +LGD
Sbjct: 65 RAKMATQVALSKVRGTTKTSP---YPQTEGMLADVMQKYGQQLGD 106
>AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated
protein 57, isoform a protein.
Length = 377
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +2
Query: 164 VQKHAGRAKEKLLQNLGKVDRT-LDDIFEEHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQ 340
++K +A + L + +G + T LDD+F E +N + + T L N Y++ A
Sbjct: 6 LRKQFNKANQYLSETMGAAEPTKLDDVFNEMEKNVDTTYNLITDLVAGTNEYLQ-PNPAT 64
Query: 341 TASKSLMEAITEVYESGWSGHDLLYVQAQNMEV-LWQDFSHKLGD 472
A + A+++V + + Y Q + M + Q + +LGD
Sbjct: 65 RAKMATQVALSKVRGTTKTSP---YPQTEGMLADVMQKYGQQLGD 106
>AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated
protein 57, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +2
Query: 164 VQKHAGRAKEKLLQNLGKVDRT-LDDIFEEHLQNFNRQHQQSTRLQKEFNNYIRCIRAAQ 340
++K +A + L + +G + T LDD+F E +N + + T L N Y++ A
Sbjct: 6 LRKQFNKANQYLSETMGAAEPTKLDDVFNEMEKNVDTTYNLITDLVAGTNEYLQ-PNPAT 64
Query: 341 TASKSLMEAITEVYESGWSGHDLLYVQAQNMEV-LWQDFSHKLGD 472
A + A+++V + + Y Q + M + Q + +LGD
Sbjct: 65 RAKMATQVALSKVRGTTKTSP---YPQTEGMLADVMQKYGQQLGD 106
>AF016444-12|AAB65927.2| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 6 protein.
Length = 295
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 222 STLPRFCRSFSLARPACFCTVFAINAPLLSAISITFS-LPNV*ITIHHQS 76
S +PR C A ACF ++ +N ++ A++ FS + + + I H+S
Sbjct: 158 SAIPRNCGVLRCAVDACFFDIWTVNRSVVFALNFAFSGVLSTKLLIFHKS 207
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 634 RHLYVVPSFSGIRL*VLEAVPLTVVVYEFATTFLDFFPDFGELVRIR 494
++ YV P S R V + PL + FATT + P GEL R R
Sbjct: 347 KNRYVTPPKSWNRPDVRKTSPLRIRKKNFATTKIHITPFMGELARKR 393
>Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical
protein F59F4.3 protein.
Length = 494
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 491 NTYTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGREQL 652
N Y R EKR RK + + + ++A+AAK RD KVT E L
Sbjct: 316 NRYDIHDKSKRDAREKRDRKALRHRVRHELRMAMKADAAKERDRKKVTDAIELL 369
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.3 bits (60), Expect = 5.0
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Frame = +2
Query: 191 EKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQST--RLQKEF--NNYIRCIRAAQTASKSL 358
EK+ + + K + + + ++ ++ N Q + ++K F + R + + L
Sbjct: 386 EKMQEQITKHEEEIKTLKQKLMEKENEQEEDDVPMAMRKRFTRSEMQRVLMDRNAYKEKL 445
Query: 359 MEAITEVYESGWSGHDLLYVQAQNMEV-----LWQDFSHKLGDQVLIPLNTYTNQFPEVR 523
ME + + + Q QN+ +W+ FS LGD V P ++ N+ R
Sbjct: 446 MELEESIKWTEMQRAKKMQQQQQNVNQKKSGGIWEFFSSLLGDSVTPPASSRGNRASSSR 505
Query: 524 KKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTK 637
K+ R + +D D + AA+RR+ K+ +
Sbjct: 506 GKM-TRSVEYIDPD------MISERRAAERREQYKLVR 536
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.3 bits (60), Expect = 5.0
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Frame = +2
Query: 191 EKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQST--RLQKEF--NNYIRCIRAAQTASKSL 358
EK+ + + K + + + ++ ++ N Q + ++K F + R + + L
Sbjct: 386 EKMQEQITKHEEEIKTLKQKLMEKENEQEEDDVPMAMRKRFTRSEMQRVLMDRNAYKEKL 445
Query: 359 MEAITEVYESGWSGHDLLYVQAQNMEV-----LWQDFSHKLGDQVLIPLNTYTNQFPEVR 523
ME + + + Q QN+ +W+ FS LGD V P ++ N+ R
Sbjct: 446 MELEESIKWTEMQRAKKMQQQQQNVNQKKSGGIWEFFSSLLGDSVTPPASSRGNRASSSR 505
Query: 524 KKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTK 637
K+ R + +D D + AA+RR+ K+ +
Sbjct: 506 GKM-TRSVEYIDPD------MISERRAAERREQYKLVR 536
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.3 bits (60), Expect = 5.0
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Frame = +2
Query: 191 EKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQST--RLQKEF--NNYIRCIRAAQTASKSL 358
EK+ + + K + + + ++ ++ N Q + ++K F + R + + L
Sbjct: 368 EKMQEQITKHEEEIKTLKQKLMEKENEQEEDDVPMAMRKRFTRSEMQRVLMDRNAYKEKL 427
Query: 359 MEAITEVYESGWSGHDLLYVQAQNMEV-----LWQDFSHKLGDQVLIPLNTYTNQFPEVR 523
ME + + + Q QN+ +W+ FS LGD V P ++ N+ R
Sbjct: 428 MELEESIKWTEMQRAKKMQQQQQNVNQKKSGGIWEFFSSLLGDSVTPPASSRGNRASSSR 487
Query: 524 KKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTK 637
K+ R + +D D + AA+RR+ K+ +
Sbjct: 488 GKM-TRSVEYIDPD------MISERRAAERREQYKLVR 518
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.3 bits (60), Expect = 5.0
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Frame = +2
Query: 191 EKLLQNLGKVDRTLDDIFEEHLQNFNRQHQQST--RLQKEF--NNYIRCIRAAQTASKSL 358
EK+ + + K + + + ++ ++ N Q + ++K F + R + + L
Sbjct: 386 EKMQEQITKHEEEIKTLKQKLMEKENEQEEDDVPMAMRKRFTRSEMQRVLMDRNAYKEKL 445
Query: 359 MEAITEVYESGWSGHDLLYVQAQNMEV-----LWQDFSHKLGDQVLIPLNTYTNQFPEVR 523
ME + + + Q QN+ +W+ FS LGD V P ++ N+ R
Sbjct: 446 MELEESIKWTEMQRAKKMQQQQQNVNQKKSGGIWEFFSSLLGDSVTPPASSRGNRASSSR 505
Query: 524 KKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTK 637
K+ R + +D D + AA+RR+ K+ +
Sbjct: 506 GKM-TRSVEYIDPD------MISERRAAERREQYKLVR 536
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 373 GGLRERLVRSRPAVRPSSEHGGPLAGLLAQTRRPSTHTAQHVYEPIPRSQ 522
GG V +RP +RP G GL R P H ++ P P Q
Sbjct: 240 GGPHMVSVGARPMIRPMGPGGPSPMGLQGPVRGPMGHQMVQMHPPPPPQQ 289
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 218 VDRTLD--DIFEEHLQNFNRQHQ-QSTRLQKEFNNYIRCIRAAQTASKSLMEAITEVYES 388
V++TL+ DI EE Q F+ + + Q T +K + ++ + TAS +E + ES
Sbjct: 5864 VEQTLEEADITEETHQRFSAEDEHQPTSTEKPVHGFMETTSTSHTASHVELEHRDDDDES 5923
Query: 389 GWSG 400
G G
Sbjct: 5924 GGEG 5927
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 218 VDRTLD--DIFEEHLQNFNRQHQ-QSTRLQKEFNNYIRCIRAAQTASKSLMEAITEVYES 388
V++TL+ DI EE Q F+ + + Q T +K + ++ + TAS +E + ES
Sbjct: 5864 VEQTLEEADITEETHQRFSAEDEHQPTSTEKPVHGFMETTSTSHTASHVELEHRDDDDES 5923
Query: 389 GWSG 400
G G
Sbjct: 5924 GGEG 5927
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 27.9 bits (59), Expect = 6.6
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +2
Query: 242 FEEHLQNFNRQHQQSTRLQKEFNNYIR 322
FE+ + +NR+++ + Q+ FNN+++
Sbjct: 43 FEDFKKKYNRKYKDESENQQRFNNFVK 69
>AF016415-2|AAW88413.1| 296|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 29 protein.
Length = 296
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 261 FCRCSSNISSRVRSTLPRFCRSFSLARPACFCTVFAINAPLLSAISITFSL 109
FC C +N+ +P C++F A CF F I + +I++ S+
Sbjct: 147 FCDCKTNL-------IPENCKNFGCAVNKCFSNYFRIQRSTVFSINVFVSI 190
>Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical
protein M01B2.7 protein.
Length = 302
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 309 LNSFCNLVDCWCC---RLKFCRCSSNISSRVRSTLPRFCRSFSLARPACFCTVFAINAPL 139
L S CN++ C CC L F + + S + FC F ++ PA F FA NA +
Sbjct: 36 LRSICNILICVCCFCDLLLFTDVIAFVVSMFTPSTQEFC--FYISIPADF-GAFASNACV 92
Query: 138 LS 133
L+
Sbjct: 93 LA 94
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1640 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1667
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1931 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1958
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1946 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1973
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1750 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1777
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1640 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1667
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1931 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1958
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1946 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1973
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 403 RPAVRPSSEHGGPLAGLLAQTRRPSTHTAQ 492
RPAV P S+ GP+ L++Q +PS ++Q
Sbjct: 1750 RPAVAPDSQQNGPV--LVSQQSQPSPMSSQ 1777
>Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +2
Query: 113 EKVIEMAESKGALIAKTVQKHAGRAKEKLLQNLGKVDRTLDDIFEEHLQNFNR 271
E++ ++ + K ALI + +H + +EKL K ++ + +++H F +
Sbjct: 106 ERIQKLEQEKAALIEIMISQHKSKYEEKLKD---KKEKRTSNYYKKHFNKFKK 155
>AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +2
Query: 113 EKVIEMAESKGALIAKTVQKHAGRAKEKLLQNLGKVDRTLDDIFEEHLQNFNR 271
E++ ++ + K ALI + +H + +EKL K ++ + +++H F +
Sbjct: 106 ERIQKLEQEKAALIEIMISQHKSKYEEKLKD---KKEKRTSNYYKKHFNKFKK 155
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 355 ADGSDHGGLRERLVRSRPAVRPSSEHGGPLA----GLLAQTRRPSTHTAQHVYEPIPRSQ 522
AD +D G + R RP PS++ G PL G AQT T P+ + +
Sbjct: 109 ADVNDTGSSPVKKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPVKKGR 168
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 355 ADGSDHGGLRERLVRSRPAVRPSSEHGGPLA----GLLAQTRRPSTHTAQHVYEPIPRSQ 522
AD +D G + R RP PS++ G PL G AQT T P+ + +
Sbjct: 109 ADVNDTGSSPVKKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPVKKGR 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,332,689
Number of Sequences: 27780
Number of extensions: 329996
Number of successful extensions: 1446
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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