Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9e08
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 0.84
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.4
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 4.5
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 22 4.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.5
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 5.9
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 22 5.9
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 5.9
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 22 5.9
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 22 5.9
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 5.9
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 24.6 bits (51), Expect = 0.84
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 246 SNISSRVRSTLPR--FCRSFSLARPACFCTVFA 154
+ IS+ VRS+LPR + ++ + CF VFA
Sbjct: 285 TTISTGVRSSLPRISYVKAIDIYLVMCFVFVFA 317
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +2
Query: 509 FPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGREQ 649
+PEV G + D+ S NL N A+RR + + E+
Sbjct: 374 YPEVSSTYTGFGIQSTDFVGDCSSLLNLPGNDARRRVEAALEAVEEE 420
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 96 ITIHHQSATEFGYSTAGCCHTSNSKC 19
I ++H GY+ CHT++ C
Sbjct: 345 IVLNHPGQISNGYTPVLDCHTAHIAC 370
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 96 ITIHHQSATEFGYSTAGCCHTSNSKC 19
I ++H GY+ CHT++ C
Sbjct: 56 IVLNHPGQISNGYTPVLDCHTAHIAC 81
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 96 ITIHHQSATEFGYSTAGCCHTSNSKC 19
I ++H GY+ CHT++ C
Sbjct: 345 IVLNHPGQISNGYTPVLDCHTAHIAC 370
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 180 DELRKSSCRTWARSTELSMIYSKSTYRISTDSTSSPP 290
D++ CRT R T ++ S + RI+ PP
Sbjct: 202 DQIHGYRCRTMHRLTRQVVVSSVANVRIADHRGVMPP 238
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 180 DELRKSSCRTWARSTELSMIYSKSTYRISTDSTSSPP 290
D++ CRT R T ++ S + RI+ PP
Sbjct: 202 DQIHGYRCRTMHRLTRQVVVSSVANVRIADHRGVMPP 238
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 544 TTFLDFFPDFGELVRIRV 491
TT+ D D+ L+R+RV
Sbjct: 96 TTYTDGSDDYSTLIRVRV 113
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 544 TTFLDFFPDFGELVRIRV 491
TT+ D D+ L+R+RV
Sbjct: 144 TTYTDGSDDYSTLIRVRV 161
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 85 PSICNRIWLQYSWLLSHVKFQMRAF 11
P+ + W QY W+L ++RA+
Sbjct: 95 PNELSLFWQQYPWVLGVSLCKIRAY 119
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 544 TTFLDFFPDFGELVRIRV 491
TT+ D D+ L+R+RV
Sbjct: 144 TTYTDGSDDYSTLIRVRV 161
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 544 TTFLDFFPDFGELVRIRV 491
TT+ D D+ L+R+RV
Sbjct: 144 TTYTDGSDDYSTLIRVRV 161
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 498 IRTNSPKSGKKSRNVV 545
+R NSP++ +KS NV+
Sbjct: 20 VRENSPRNLEKSLNVI 35
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,438
Number of Sequences: 438
Number of extensions: 4068
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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