Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9d13
(644 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 44 1e-06
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 44 1e-06
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 2.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 4.4
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.7
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.7
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 7.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.7
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 44.4 bits (100), Expect = 1e-06
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = +2
Query: 248 RPFIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVK 427
+ F+ GG+A+ +++ PI+ K LQ+Q E RY GM+DC ++ K++G
Sbjct: 12 KDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISE-EQRYKGMIDCFVRIPKEQGFL 70
Query: 428 ALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTK--EHLPTNTFCAAFAGGLS 601
+ + G V+R + F K D T+ + N AG S
Sbjct: 71 SYWRGNLANVIRYFPTQALNFAFKDKYKQVFL-GGVDKNTQFLRYFVGNLASGGAAGATS 129
Query: 602 SAIANPTDVLKVRM 643
P D + R+
Sbjct: 130 LCFVYPLDFARTRL 143
Score = 41.1 bits (92), Expect = 9e-06
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +2
Query: 263 GGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCG 442
GG A + +P+D +TRL K E +TG+ +C+ K K +G+ LY G
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAADVGKAGG---EREFTGLGNCLTKIFKADGITGLYRG 178
Query: 443 IWPAVLRQATYGTIKFGTYYTLKNAL 520
+V Y FG Y T + L
Sbjct: 179 FGVSVQGIIIYRAAYFGFYDTARGML 204
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 44.4 bits (100), Expect = 1e-06
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = +2
Query: 248 RPFIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVK 427
+ F+ GG+A+ +++ PI+ K LQ+Q E RY GM+DC ++ K++G
Sbjct: 12 KDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISE-EQRYKGMIDCFVRIPKEQGFL 70
Query: 428 ALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTK--EHLPTNTFCAAFAGGLS 601
+ + G V+R + F K D T+ + N AG S
Sbjct: 71 SYWRGNLANVIRYFPTQALNFAFKDKYKQVFL-GGVDKNTQFLRYFVGNLASGGAAGATS 129
Query: 602 SAIANPTDVLKVRM 643
P D + R+
Sbjct: 130 LCFVYPLDFARTRL 143
Score = 41.1 bits (92), Expect = 9e-06
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +2
Query: 263 GGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCG 442
GG A + +P+D +TRL K E +TG+ +C+ K K +G+ LY G
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAADVGKAGG---EREFTGLGNCLTKIFKADGITGLYRG 178
Query: 443 IWPAVLRQATYGTIKFGTYYTLKNAL 520
+V Y FG Y T + L
Sbjct: 179 FGVSVQGIIIYRAAYFGFYDTARGML 204
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = -3
Query: 441 PQYKALTPSCLEVLMMQSTIPVYRSST*RGSIFCPWI*RRVLVVSI 304
P++ +TP ++ T+ + T ++ PWI +R V S+
Sbjct: 134 PEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASV 179
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 215 CISRVMGERNWRPFIYGGLASIV 283
C + V + W PF +GG+ +V
Sbjct: 548 CSAPVWRFQPWGPFTWGGIGVVV 570
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 84 LVFNKTLNNKTKRFSIQN*ISCLTAS 7
+VFN TL KT +++ I C+ S
Sbjct: 226 IVFNITLRRKTLFYTVNLIIPCVGIS 251
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 483 IVPYVACRSTAGQMPQYKALT 421
I Y C T+ MP ALT
Sbjct: 793 ITKYTGCELTSESMPLQSALT 813
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 119 SNYRIFFTYKCYW 81
SN +F YK YW
Sbjct: 559 SNSAVFTNYKLYW 571
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 483 IVPYVACRSTAGQMPQYKALT 421
I Y C T+ MP ALT
Sbjct: 883 ITKYTGCELTSESMPLQSALT 903
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,227
Number of Sequences: 438
Number of extensions: 4315
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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