Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9c15
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    29   3.8  
L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p...    28   5.0  
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ...    28   5.0  
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF024491-4|AAZ82855.1|  365|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF024491-3|AAB70311.2|  420|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 295 PEAENSPINRRTAMPATPNPPRTSNA 218
           P +  S  NRR+  P  P PPR+S A
Sbjct: 521 PSSSGSGSNRRSGPPPPPPPPRSSGA 546


>L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical
           protein ZK686.2 protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 279 VPSIGELLCQPPPILPEPVMLAAPFGSATSL 187
           +PS+   +  PPP+ P  V +AAP GS  ++
Sbjct: 141 LPSLFFEIRSPPPLRPRDVAIAAPTGSGKTI 171


>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical protein
            T25E12.4a protein.
          Length = 1101

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 59   PERSFRFYLQVFVKNPLVFYLIYESGVLY 145
            P+R+F ++L + V  P  FY ++   +++
Sbjct: 1057 PQRNFSYFLHLLVTYPFKFYFVFSCFIIF 1085


>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
            protein T25E12.4a protein.
          Length = 1101

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 59   PERSFRFYLQVFVKNPLVFYLIYESGVLY 145
            P+R+F ++L + V  P  FY ++   +++
Sbjct: 1057 PQRNFSYFLHLLVTYPFKFYFVFSCFIIF 1085


>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
            protein T25E12.4a protein.
          Length = 1101

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 59   PERSFRFYLQVFVKNPLVFYLIYESGVLY 145
            P+R+F ++L + V  P  FY ++   +++
Sbjct: 1057 PQRNFSYFLHLLVTYPFKFYFVFSCFIIF 1085


>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
            protein T25E12.4a protein.
          Length = 1101

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 59   PERSFRFYLQVFVKNPLVFYLIYESGVLY 145
            P+R+F ++L + V  P  FY ++   +++
Sbjct: 1057 PQRNFSYFLHLLVTYPFKFYFVFSCFIIF 1085


>AF024491-4|AAZ82855.1|  365|Caenorhabditis elegans Hypothetical
           protein C24A1.2b protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 288 LRTVPSIGELLCQPPPILPEPVMLAAPFGSAT 193
           L T+P I     QP P  P+ ++ AAPF S+T
Sbjct: 156 LLTIPQIS---VQPQPTAPQTLLTAAPFISST 184


>AF024491-3|AAB70311.2|  420|Caenorhabditis elegans Hypothetical
           protein C24A1.2a protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 288 LRTVPSIGELLCQPPPILPEPVMLAAPFGSAT 193
           L T+P I     QP P  P+ ++ AAPF S+T
Sbjct: 211 LLTIPQIS---VQPQPTAPQTLLTAAPFISST 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,928,828
Number of Sequences: 27780
Number of extensions: 203726
Number of successful extensions: 734
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)