Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9c12
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.39 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.39 
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    24   3.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.6  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   3.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.3  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 100 IPQHLSHEHRPQQRRVPSETDP 165
           +P H  H+H PQQ+  P  + P
Sbjct: 103 LPHHPHHQHHPQQQPSPQTSPP 124


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 100 IPQHLSHEHRPQQRRVPSETDP 165
           +P H  H+H PQQ+  P  + P
Sbjct: 103 LPHHPHHQHHPQQQPSPQTSPP 124


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 601 KEELPPEPVHAEDREDVGGYGGRDGDERLHEDVR 500
           +EE PP  +   D  +V    G   D+R  E++R
Sbjct: 48  EEESPPPKIECTDPREVYNECGSSCDDRTCENIR 81


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +2

Query: 125 TGRSKDEYPVKQILVDDLVHAKPEKQ 202
           +G+S   Y ++ +L D+  H +PE++
Sbjct: 36  SGKSNFFYAIQFVLSDEFTHLRPEQR 61


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
 Frame = -1

Query: 318 IVIEIVVNLSIGGTNSCL----LCSTMSLNILLSLDFGSFDSICFSGFACTRSSTRICFT 151
           +V+ +   L + GT S       C+ M  +    L   S  + C +  A T + T +  +
Sbjct: 20  LVVYLREKLRLCGTKSMCREMRACTVMVSSDRKRLTASSAVNACLTRCAFTDAVTTVEVS 79

Query: 150 GYSSLLRPVFMR*MLRNTSRASSCRP 73
            YS+ L PV  R    + S+   C P
Sbjct: 80  KYSTRLHPVQERIAKAHGSQCGFCTP 105


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +1

Query: 511 HGVAHHRRGRHTLQ-HLRGPRHG 576
           H  AH  +G+H  Q H  G  HG
Sbjct: 649 HHQAHQHQGQHHAQHHSNGTHHG 671


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 85   RRSRSIPQHLSHEHRPQQRRVPSETD 162
            RR +  PQ    +H PQQ+ V   +D
Sbjct: 1110 RREQVRPQRRIRQHMPQQKEVVELSD 1135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,683
Number of Sequences: 2352
Number of extensions: 11664
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)