Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9c10
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical pr... 32 0.41
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 31 0.54
U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 30 1.3
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 29 2.2
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p... 29 2.9
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 29 2.9
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 29 2.9
AC006617-9|AAF39767.1| 409|Caenorhabditis elegans Hypothetical ... 29 2.9
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 29 3.8
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 29 3.8
Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 28 5.1
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 28 6.7
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 28 6.7
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical ... 28 6.7
>U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical
protein C06A8.6 protein.
Length = 349
Score = 31.9 bits (69), Expect = 0.41
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 295 NLIVDNEEDSTKLTLAYEWLYEVPRTIVDKFSN--HIKYLDISHNKITNLDPLVHFFHLS 468
NLI E TL + Y+ T V+ + +++ LD+S N+IT ++ L L
Sbjct: 64 NLIKKIENLDCLTTLTHLEFYDNQITKVENLDSLVNLESLDLSFNRITKIENLEKLTKLK 123
Query: 469 SLIADHNPITE 501
+L HN IT+
Sbjct: 124 TLFFVHNKITK 134
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +1
Query: 367 RTIVDK-FSN--HIKYLDISHNKITNLDP--LVHFFHLSSLIADHNPITE 501
RTI FSN +++YLD+SHN+I + P L L L DHN + E
Sbjct: 477 RTITSMTFSNLRNLRYLDLSHNRIIKILPSALYQLPALDVLHLDHNNLNE 526
>U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical
protein T19D7.6 protein.
Length = 156
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 337 LAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLVHFFHLSSLIADHNPITENCAXX 516
+A++ P ++ ++ ++H+ + I + L + + L D+N +TEN
Sbjct: 7 VAHQIYQNSPISMKNEINSHVVLSGLCLTSIPST-VLKNRTRIEKLTLDNNVLTENSFNM 65
Query: 517 XXXXXXXXXX-NHCKIASLYPWVGKLKESCPNLQYLCLMGNPAAPSYF 657
+ KI +L + ++++CPN++ L + NP P F
Sbjct: 66 PKFANLKELSVRNNKIRNLGVLLANIQKNCPNIEVLRVKNNPGIPEKF 113
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 325 TKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLVHFFHLSSLIADHNPI 495
T L L + ++++ DK S + +LD+S+NKI+ V +S+++ D N +
Sbjct: 392 TTLDLGHNKIHDIEEGTFDKLSK-LFWLDLSNNKISGFKTSVFKKKISNILLDGNQL 447
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 367 RTIVDKFSNHIKYLDISHNKITNLDPLVHFFHLSSLIADHNPITENCA 510
R I +K N +KYL + +N + ++ ++H LS + NP+ +C+
Sbjct: 849 RGIFEKLPN-LKYLTLHNNSLEDIPQVLHSTALSKISLSSNPLRCDCS 895
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 394 HIKYLDISHNKITNLDPLVHFFHLSSLIADHNPI 495
++ +LD+S+N+IT ++ L +L L HN I
Sbjct: 55 NLVFLDVSYNRITKIEGLSELINLEELHLVHNKI 88
>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
protein F10G7.10c protein.
Length = 1824
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 65 TFNYCLISILCHHHQINLSCNLHFND 142
T N CLI L +++ CNL FND
Sbjct: 1769 TMNSCLIEFLRFSYELLFHCNLGFND 1794
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 65 TFNYCLISILCHHHQINLSCNLHFND 142
T N CLI L +++ CNL FND
Sbjct: 1769 TMNSCLIEFLRFSYELLFHCNLGFND 1794
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = -1
Query: 330 FCRVLFIVHN*IRR--YYGFCHVCH*VDDYISRQVH*NHSLIR---NTRATCMIVYFVIH 166
FC + F +++ + ++GF + H ++D + R N L++ NT A I+YF+I
Sbjct: 143 FCGLAFALYSFLPTTIWFGFTNEVHILNDTLMRTR--NPELVKTATNTTAIFTIIYFIII 200
Query: 165 CV 160
CV
Sbjct: 201 CV 202
>AC006617-9|AAF39767.1| 409|Caenorhabditis elegans Hypothetical
protein C39B5.2 protein.
Length = 409
Score = 29.1 bits (62), Expect = 2.9
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = +1
Query: 157 LNTMDDKINNHASCSSVPDEGVISVDLSRDIVVDSMTDMTEAIISPNLIVDNEEDSTKLT 336
LN +D + N + CS ++ I++ + T+A +I++N+E +T LT
Sbjct: 51 LNILD--VFNFSVCSPKTKSTTENIQKDAFIMMKHICQRTDAGELHKIIMENDESNTHLT 108
Query: 337 LAYEWLYEVPRTIVDKFSNHIKYLDISHNK------ITNLDPLVHFFHLSSLIADHNPI 495
+ +E +V + V ++ K++ I N IT+ + +V +F+ S+L H +
Sbjct: 109 VRFE---KVDESQVGRYGKLFKWV-IGKNAVTCCICITSNEEIVFYFNGSALQDVHQEV 163
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 322 STKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLV-HFFHLSSLIADHNPI 495
S L L+Y + +P ++ + + +LD+S+NK+ L P + L SL +NP+
Sbjct: 128 SIVLNLSYNNIETIPNSVCANLID-LLFLDLSNNKLDMLPPQIRRLSMLQSLKLSNNPL 185
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 322 STKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLV-HFFHLSSLIADHNPI 495
S L L+Y + +P ++ + + +LD+S+NK+ L P + L SL +NP+
Sbjct: 128 SIVLNLSYNNIETIPNSVCANLID-LLFLDLSNNKLDMLPPQIRRLSMLQSLKLSNNPL 185
>Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical
protein F25C8.2 protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/19 (47%), Positives = 18/19 (94%)
Frame = +1
Query: 361 VPRTIVDKFSNHIKYLDIS 417
VP+ I+DKF+++I+YL+++
Sbjct: 106 VPKKILDKFNDYIRYLNVA 124
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 RTIVDKFSNHIKYLDISHNKITNLDPLVHFFHLSSLIADHNPITENCA 510
R I +K N +KYL + N + ++ ++H LS + NP+ +C+
Sbjct: 849 RGIFEKLPN-LKYLTLLINSLEDIPQVLHSTALSKISLSSNPLRCDCS 895
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 331 LTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLVHFFH-LSSLIADHNPIT 498
L L+ + ++ T++D F +KYLD+S NKI + L + L SL HN I+
Sbjct: 73 LDLSNNSIRDIEETLLDSFPG-LKYLDLSWNKIRYVPKLSTAPNALVSLNLVHNEIS 128
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 331 LTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLVHFFH-LSSLIADHNPIT 498
L L+ + ++ T++D F +KYLD+S NKI + L + L SL HN I+
Sbjct: 73 LDLSNNSIRDIEETLLDSFPG-LKYLDLSWNKIRYVPKLSTAPNALVSLNLVHNEIS 128
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 373 IVDKFSNHIKYLDISHNKITNLDPLVH--FFHLSSLIADHN 489
++ KF + LD+S+N+I +D V F +L+ L HN
Sbjct: 198 VLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLSHN 238
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 325 TKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHN--KITNLDPLVHFFHLSSLIADHNPI 495
TKL L++ L V + + D N + LD+ +N K+ + + L L D NPI
Sbjct: 231 TKLYLSHNVLQTVKKDVFDAAKNTLHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGNPI 289
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 373 IVDKFSNHIKYLDISHNKITNLDPLVH--FFHLSSLIADHN 489
++ KF + LD+S+N+I +D V F +L+ L HN
Sbjct: 198 VLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLSHN 238
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 325 TKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHN--KITNLDPLVHFFHLSSLIADHNPI 495
TKL L++ L V + + D N + LD+ +N K+ + + L L D NPI
Sbjct: 231 TKLYLSHNVLQTVKKDVFDAAKNTLHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGNPI 289
>AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical
protein Y55F3C.9 protein.
Length = 711
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 292 PNLIVDNEEDSTKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLVHFFHLSS 471
P I D T L+ + L E T++ K ++ LDIS I NL+ + + HL
Sbjct: 301 PEKIADMLPSLTTFILSGKKLTENEMTLLIKSFPNLSCLDISDTNIKNLNGISNLTHLQV 360
Query: 472 L 474
L
Sbjct: 361 L 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,216,469
Number of Sequences: 27780
Number of extensions: 270674
Number of successful extensions: 903
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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