Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9c09
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    25   2.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   3.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   6.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.6  

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 471 ALRMARIHTKKKDVITLDHAYHGHLTTMIDISPYKFNLPG 590
           A+ MAR  T + + + +  A H H  TM   S  K ++ G
Sbjct: 402 AIEMARSRTSQDNTLIVVTADHSHTMTMSGYSSRKNDILG 441


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 312 VVEAGRNQMSLISTNNR 362
           VV+AGR  +SL  TNNR
Sbjct: 552 VVDAGRRALSLGRTNNR 568


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 213 IVRGIAQ---FMYDETGERYLDCINNVAHVGHCHPHVVEAGR 329
           +V+G+     + Y+E G+R    +N+V +V     +++  G+
Sbjct: 318 VVKGVGSGHLYYYEENGDRRKITLNDVYYVPELESNLISVGK 359


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 660  DEYISPCTRPVLVPHEPSLV 601
            DEY+ P TRP ++   PS V
Sbjct: 1155 DEYLQPKTRPSIMLPGPSAV 1174


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +3

Query: 312 VVEAGRNQMSLISTNNR 362
           VVEAGR  MS   TN R
Sbjct: 603 VVEAGRTAMSFRRTNGR 619


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 509 CNYLGPRVSWPSNDYDRYFTIQI*PTR 589
           CN       WPS + D Y+TI +  T+
Sbjct: 286 CNVPICAEKWPSPEQDDYYTIALLTTQ 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,621
Number of Sequences: 2352
Number of extensions: 14846
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)