Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9c03
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    93   1e-20
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    29   0.19 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    28   0.25 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   1.0  
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    25   1.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   2.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.4  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   7.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   7.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.4  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
            calcium/calmodulin-dependentprotein kinase, CAKI protein.
          Length = 872

 Score = 92.7 bits (220), Expect = 1e-20
 Identities = 39/126 (30%), Positives = 70/126 (55%)
 Frame = +2

Query: 206  RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 385
            R LVL G  G G+  +   L+ ++PDK+ + + HTTR PR  E+NG  Y+F + ++M   
Sbjct: 693  RTLVLLGAHGVGRRHIKNTLIAKYPDKYAYPIPHTTRPPRPDEENGRSYYFISHDEMMAD 752

Query: 386  IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 565
            I   E++E       +YGT  + +  +   GK+ +LD+E + +K ++  +  P +VF+  
Sbjct: 753  ISANEYLEYGTHEDAMYGTKLETIRRIHADGKMAILDVEPQALKILRTAEFTPYVVFIAA 812

Query: 566  PSIDEL 583
            P +  +
Sbjct: 813  PLLQNI 818


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 572 IDELERRLRARNTEQEDSLKKRLETARREIKFGQE 676
           ID+ E+RLR    E  D L   L   RREI   Q+
Sbjct: 198 IDQYEQRLRTNVEECHDKLADHLAEQRREIDAAQQ 232


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 569  SIDELERRLRARNTEQEDS-LKKRLET 646
            S+D+LERRL A   E ED+ L KRL +
Sbjct: 1549 SLDDLERRLSAAEKELEDAQLTKRLSS 1575


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +3

Query: 285 SLASVSPIQQEHHGLV--KKTECIIISLT 365
           ++ASVS    +HH  +  +KTEC++IS T
Sbjct: 748 AVASVSHWMAQHHLQIAPEKTECVLISST 776


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +2

Query: 458 DDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVF 556
           +DV+  GK+   D ++E V++  R D++ +L +
Sbjct: 48  EDVKPGGKVAYDDPDVERVRRAHRNDMENILPY 80


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 191 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 280
           V K    L + G SG+GK+TLL  L    P
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 151


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 191 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 280
           V K    L + G SG+GK+TLL  L    P
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 151


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 191 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 280
           V K    L + G SG+GK+TLL  L    P
Sbjct: 100 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 129


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -2

Query: 538 QVCAFDLLHP--FHFNIQHTY--FASTTYIIYCFLACSINVSTENCSFYKFTF 392
           Q C F LL    F F ++ T   F  T+++IYCF++ S    +    F  F F
Sbjct: 5   QFCPFCLLFNLYFLFVVRGTGKPFLPTSFLIYCFVSPSCLECSSVPLFINFIF 57


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 572 IDELERRLRARNTEQEDSLKKRLETARREIK 664
           IDE ER LR +   + +  K+R    RR ++
Sbjct: 833 IDEEERSLRQKQELEREEFKRRQAEDRRRME 863


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 212 LVLCGPSGSGKSTLLKRLLK 271
           LVL G S  GKS+L+ R +K
Sbjct: 27  LVLLGESAVGKSSLVLRFVK 46


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 218 LCGPSGSGKSTLLKRLLKEF 277
           + GP+GSGKS ++  +L  F
Sbjct: 99  IIGPNGSGKSNVIDSMLFVF 118


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +2

Query: 566 PSIDELERRLRARNTEQEDSLKKRLETARREI 661
           P I E+ERR++ R+ + +D +K+ +     ++
Sbjct: 758 PKISEIERRMQQRDMKIQD-IKESMNNVEDDV 788


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,141
Number of Sequences: 2352
Number of extensions: 15298
Number of successful extensions: 63
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)