Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9b22
(707 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 45 7e-05
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 42 5e-04
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 37 0.018
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 36 0.024
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 36 0.032
04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581 34 0.096
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 34 0.13
11_06_0262 + 21771577-21772059,21772167-21773252 33 0.17
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 33 0.17
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 33 0.29
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 32 0.39
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 31 0.68
03_01_0010 - 94931-96034,96117-96442,97154-97283 31 0.90
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 31 1.2
09_02_0311 + 7164774-7166327 31 1.2
02_02_0424 + 10074206-10074287,10074389-10074485,10074584-100746... 30 1.6
09_02_0157 + 5083771-5083996,5084007-5084326,5085958-5086392,508... 30 2.1
02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246 30 2.1
01_06_1264 + 35854600-35856849 30 2.1
01_05_0389 + 21716056-21716191,21716275-21716597,21716889-217175... 30 2.1
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 29 2.7
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 29 2.7
01_01_0285 - 2360799-2362631 29 2.7
04_04_1600 + 34704527-34704758,34705393-34706777 29 3.6
03_05_0865 - 28365430-28367640 29 3.6
03_05_0503 - 24952770-24953846,24953961-24954641,24954730-249548... 28 6.3
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 28 6.3
05_01_0149 + 989698-991797 28 8.4
05_01_0147 - 981697-983739 28 8.4
03_05_0199 - 21893051-21893509,21893835-21894482,21894566-218948... 28 8.4
02_04_0321 + 22020126-22020431,22020520-22021626 28 8.4
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 44.8 bits (101), Expect = 7e-05
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIY 536
WR ++ + ++P ++ + M FL ESP++L +D+ KA+ L+ IY
Sbjct: 190 WRWMLGVAAVPAILQFVLMLFLPESPRWLFWKDEKAKAISVLEKIY 235
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +3
Query: 357 FYIEISWLHMEYRPWRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIY 536
F ++W M WR L+ + ++P + + ESP+FL + + +A+D L+ +
Sbjct: 201 FEASLAWTVMPKFGWRWLLALSAVPSFVLLLFYVITPESPRFLCMKGRVTEAMDVLEKMA 260
Query: 537 RWNTGRKPYTYPVSNFN 587
R N + P VS+ N
Sbjct: 261 RLNNVQLPSGRLVSDKN 277
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIY 536
WR ++ + +IP V+ M FL ESP++L + + +A L+ IY
Sbjct: 185 WRWMLGVAAIPAVVQFFLMLFLPESPRWLYRKGREEEAEAILRKIY 230
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIY 536
WR ++ I +P I I M L ESP++L +D+ +A L+ IY
Sbjct: 185 WRWMLGIAGLPAFIQFILMCMLPESPRWLYRQDRKEEAEAILRKIY 230
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 369 ISWLHMEYRPWRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIYRWNT 548
++W M WR L+ + S P I I ESP++L S +T+ A L+ I R N
Sbjct: 192 LAWAVMPVLGWRWLLALSSAPCFILFIFFPVTPESPRYLCSVGRTMDARVILEKIARMNN 251
Query: 549 GRKP 560
P
Sbjct: 252 SSLP 255
>04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581
Length = 521
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIA-MAFLNESPKFLLSRDQTVKALDTLKSI 533
WRML + S+P ++ +A + F++ESP++ L R + A+ +++I
Sbjct: 233 WRMLYVVTSLPSLVFVVAVLPFVSESPRWYLVRRRADDAMRVVRAI 278
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRD 497
WR+ + + ++P TI FL E+P F++ RD
Sbjct: 206 WRISLSMAAVPAAFLTIGAVFLPETPSFIIERD 238
>11_06_0262 + 21771577-21772059,21772167-21773252
Length = 522
Score = 33.5 bits (73), Expect = 0.17
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +3
Query: 240 VGESTPKRHRSRFMFLLASATMCVQFIICSFALPVFKHSFYIEISWLHMEYRPWRMLMQI 419
V E P R+R F + +QF +C AL +F +E + + WR+ + +
Sbjct: 167 VAEMAPARYRGAF-------SNGIQFSLCLGALAATTVNFAVEK--IRGGWG-WRLSLAL 216
Query: 420 ISIPGVIGTIAMAFLNESPKFLLSRDQ---TVKAL 515
+P V T+ FL E+P L+ + + TVKAL
Sbjct: 217 AGVPAVFLTVGAVFLPETPNSLVQQGKDRDTVKAL 251
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/46 (30%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 399 WRMLMQIISIPGVI-GTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+++ ++SIP +I + + +L ESP++L+S+ + +A L+ +
Sbjct: 163 WRIMLGVLSIPSLIYFALTIFYLPESPRWLVSKGRMAEAKRVLQGL 208
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+ + + ++P VI T+ L ++P LLSR + +A L+ I
Sbjct: 200 WRVSLGLAAVPAVIMTVGSILLPDTPNSLLSRGKENEARTMLRRI 244
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIY 536
WR + I +P ++ + MA ESP++L + + +A +K +Y
Sbjct: 225 WRTMFGISIVPSILLALGMAVSPESPRWLFQQGKLSQAETAIKKLY 270
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 381 HMEYRPWRMLMQIISIPGVIGTIAMAFLNESPKFL 485
H++ WR ++ +PGV+ M F ESP++L
Sbjct: 232 HIDQSRWRTMLYAACVPGVLIVAGMQFAVESPRWL 266
>03_01_0010 - 94931-96034,96117-96442,97154-97283
Length = 519
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTL 524
WR+ + + ++P T+ FL E+P F++ R V + L
Sbjct: 201 WRISLSMAAVPAAFLTVGALFLPETPSFVIQRSGDVDSARAL 242
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIYRWN 545
WR L+ S+P + ESP++L + +T A+ L+++ R N
Sbjct: 123 WRWLLAFSSLPSFALLLFYPLTLESPRYLCMKGRTADAVQVLETMARLN 171
>09_02_0311 + 7164774-7166327
Length = 517
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+ + + ++P + T FL E+P LL R + +A L+ +
Sbjct: 201 WRLSLALAAVPAAVMTAGALFLPETPNSLLERGRRGEARRMLQRV 245
>02_02_0424 +
10074206-10074287,10074389-10074485,10074584-10074651,
10074727-10074859,10075102-10075137,10076109-10076208,
10076312-10076424,10076511-10076604,10077301-10077454,
10077563-10077706,10077802-10077875,10077949-10078037,
10078311-10078365,10078563-10078616
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 393 RPWRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKA 512
R WR+ + ++P + + M F ESP++L +T +A
Sbjct: 209 RWWRVCFWVAAVPATLQALGMEFCAESPQWLYKCGRTTEA 248
>09_02_0157 +
5083771-5083996,5084007-5084326,5085958-5086392,
5087277-5087921
Length = 541
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTL 524
WR+ + + ++PG + T+ FL E+P LL + + + + L
Sbjct: 231 WRVSLAVAAVPGGLLTLGALFLPETPNSLLQQGRDKRRVRVL 272
>02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246
Length = 554
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+ + +P VI + AF+ ++P L R + +A D+L+ I
Sbjct: 244 WRLSLGAGIVPAVIVIVGAAFIPDTPNSLALRGRLDEARDSLRRI 288
>01_06_1264 + 35854600-35856849
Length = 749
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +3
Query: 246 ESTPKRHRSRFMFLLASATMCVQFIICSFALPVFKHSFYIEI-SWLHMEYRPWRMLMQ-- 416
+ +PK + R F + M F C+ ALPVF H YI + + YR ++
Sbjct: 485 DQSPKGAQERLGFF--AFAMSTMFYTCADALPVFLHERYIFLRETAYGAYRRTSYVLSNA 542
Query: 417 IISIPG-VIGTIAMAF 461
I+S P V+ ++A AF
Sbjct: 543 IVSFPPLVVLSLAFAF 558
>01_05_0389 +
21716056-21716191,21716275-21716597,21716889-21717518,
21717602-21718054
Length = 513
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+ + + ++P VI FL ++P LLSR + +A L+ I
Sbjct: 202 WRVSLGLAAVPAVIMAGGSLFLPDTPNSLLSRGKENEARAMLRRI 246
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFL 485
WRML+ +P +I + ++F+ ESP++L
Sbjct: 133 WRMLVIAGLVPSIILIVGLSFIPESPRWL 161
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 363 IEISWLHMEYRPWRMLMQIISIPGVIGTIAMAFLNESPKFL 485
I +++L + PWR+L I SIP + + F+ ESP++L
Sbjct: 202 ILLAYLLGMFVPWRLLAVIGSIPCTLLIPGLFFIPESPRWL 242
>01_01_0285 - 2360799-2362631
Length = 610
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 304 CASSL*FAPSLYRFSNIRSTSKYRGCTWNTA--RGGC*CRSSVYQEL*EL 447
CA L F P L + + RSTS +G N GGC Y++L EL
Sbjct: 386 CAYLLAFQPELVQDNTYRSTSTVQGTLQNARDFLGGCKSHGEKYKKLIEL 435
>04_04_1600 + 34704527-34704758,34705393-34706777
Length = 538
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+++ + +P V A+ + ESP++L+ +++ +A + L +
Sbjct: 219 WRVMLAVGILPSVSIAFALLVIPESPRWLVMKNRADEAREVLLKV 263
>03_05_0865 - 28365430-28367640
Length = 736
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 475 GLSLRKAIAIVPITPGILMICISIRHGRYSMCNH 374
G +R+ +V TPG L+ C+ R+ + CN+
Sbjct: 435 GFKIRQGCEVVIATPGRLLDCLERRYAVLNQCNY 468
>03_05_0503 -
24952770-24953846,24953961-24954641,24954730-24954882,
24955041-24955043
Length = 637
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 202 PVHHRLMQQLLY*SGK------APQRGT-EADSCFSWPVPQCASSL*FAPSL 336
P+HHRL + Y + APQ T EA FSWP P A + AP++
Sbjct: 583 PLHHRLQIEFHYTASSPKEITSAPQILTIEAPFEFSWPEPPPAMEIALAPAV 634
>02_01_0041 +
279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 488 EQKLWALVEEGHSDSSYNSWYTDDLHQHPPRAVFHVQ-PR-YFD 363
+ L + EEG + S ++W ++PP VF+ + P YFD
Sbjct: 245 QSSLETIAEEGTTTGSVSTWGQGGTSEYPPNMVFYAEYPGWYFD 288
>05_01_0149 + 989698-991797
Length = 699
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 246 ESTPKRHRSRF-MFLLASATMCVQFIICSFALPVFKHSFYIEI-SWLHMEYR 395
+ TPK + R F +A +TM F +C+ ALPVF +I + H YR
Sbjct: 435 DDTPKGVQERLGFFAMAMSTM---FYVCADALPVFVQERHIYLRETAHNAYR 483
>05_01_0147 - 981697-983739
Length = 680
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 246 ESTPKRHRSRF-MFLLASATMCVQFIICSFALPVFKHSFYIEI-SWLHMEYR 395
+ TPK + R F +A +TM F +C+ ALPVF +I + H YR
Sbjct: 416 DDTPKGVQERLGFFAMAMSTM---FYVCADALPVFVQERHIYLRETAHNAYR 464
>03_05_0199 -
21893051-21893509,21893835-21894482,21894566-21894888,
21895978-21896116
Length = 522
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+ + + + P + + FL +SP L++R + +A L+ I
Sbjct: 203 WRVSLGLAAAPACVIAVGSLFLPDSPSSLINRGRHEQARRVLRRI 247
>02_04_0321 + 22020126-22020431,22020520-22021626
Length = 470
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 399 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 533
WR+ + + +P + + AF+ ++P L+ R + +A +L+ I
Sbjct: 150 WRLSLGVAVVPAAVILVGAAFIPDTPNSLVLRGKLDEARASLRRI 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,525,033
Number of Sequences: 37544
Number of extensions: 356428
Number of successful extensions: 900
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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