Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9b20
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16863-1|CAA34753.1| 233|Homo sapiens Fc-gamma receptor III-1 (... 31 2.9
X07934-1|CAA30758.1| 233|Homo sapiens Fc-gamma receptor precurs... 31 2.9
J04162-1|AAA35881.1| 233|Homo sapiens protein ( Human leukocyte... 31 2.9
BC128562-1|AAI28563.1| 233|Homo sapiens Fc fragment of IgG, low... 31 2.9
AL451067-4|CAM15150.1| 269|Homo sapiens Fc fragment of IgG, low... 31 2.9
AL451067-3|CAM15149.1| 249|Homo sapiens Fc fragment of IgG, low... 31 2.9
AJ581669-1|CAE46408.1| 233|Homo sapiens Fc-gamma receptor IIIB ... 31 2.9
AB051580-1|BAB18521.1| 233|Homo sapiens IgG receptor IIIB protein. 31 2.9
AB025256-1|BAA83803.1| 233|Homo sapiens Fc-gamma receptor IIIb ... 31 2.9
AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein. 30 8.9
AK025589-1|BAB15181.1| 818|Homo sapiens protein ( Homo sapiens ... 30 8.9
AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment e... 30 8.9
>X16863-1|CAA34753.1| 233|Homo sapiens Fc-gamma receptor III-1 (CD
16) protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 143 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 179
>X07934-1|CAA30758.1| 233|Homo sapiens Fc-gamma receptor precursor
(AA -18 to 215) protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 143 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 179
>J04162-1|AAA35881.1| 233|Homo sapiens protein ( Human leukocyte
IgG receptor (Fc-gamma-R) mRNA, complete cds. ).
Length = 233
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 143 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 179
>BC128562-1|AAI28563.1| 233|Homo sapiens Fc fragment of IgG, low
affinity IIIb, receptor (CD16b) protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 143 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 179
>AL451067-4|CAM15150.1| 269|Homo sapiens Fc fragment of IgG, low
affinity IIIb, receptor (CD16b) protein.
Length = 269
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 179 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 215
>AL451067-3|CAM15149.1| 249|Homo sapiens Fc fragment of IgG, low
affinity IIIb, receptor (CD16b) protein.
Length = 249
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 159 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 195
>AJ581669-1|CAE46408.1| 233|Homo sapiens Fc-gamma receptor IIIB
protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 143 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 179
>AB051580-1|BAB18521.1| 233|Homo sapiens IgG receptor IIIB protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 143 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 179
>AB025256-1|BAA83803.1| 233|Homo sapiens Fc-gamma receptor IIIb (CD
16) protein.
Length = 233
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QPGLSKTVFSHVSSFHSLLIDWVKLKDKGSKFCKGISSVK 258
Q G + F H S FH I LKD GS FC+G+ K
Sbjct: 143 QNGKDRKYFHHNSDFH---IPKATLKDSGSYFCRGLVGSK 179
>AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein.
Length = 983
Score = 29.9 bits (64), Expect = 8.9
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Frame = +1
Query: 16 LETRLKIFISNLSNKFV-MSKTPIKELAINFVPREITTPNKDQPGLSKTVFSHVSSFHSL 192
+E ++ +L++K V ++K + L + P L ++ S VS S
Sbjct: 750 MEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASK 809
Query: 193 LIDWVKLKDK-GSKFCKGISSVKLHEYNDDYYPHLLKPLTEGLVEIIDSFQNIIEGIKIL 369
L + VK K+K S+ + S V + + LLK + + E++ FQ E + +
Sbjct: 810 LKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEM 869
Query: 370 KNQLDSLSKLQ 402
K +S SKL+
Sbjct: 870 KRYAESSSKLE 880
>AK025589-1|BAB15181.1| 818|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21936 fis, clone HEP04408. ).
Length = 818
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +1
Query: 13 YLETRLKIFISNLSNKFVMSKTPIKELAINFVPREITTPNKDQPGLSKTVFSHVSSFHSL 192
YL+ L + + N ++K S+ E+ ++ RE+ + PG + T SH S + S+
Sbjct: 714 YLKNNLPVLLQNQNSKIASSQQVTAEIPVDLNTREVIRESGKCPG-NITEESHDSVYSSV 772
Query: 193 LIDWVKLKDKGSKFCK 240
+ L +K C+
Sbjct: 773 TQNRHFLPSTSTKVCE 788
>AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment
epithelial cell protein protein.
Length = 980
Score = 29.9 bits (64), Expect = 8.9
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Frame = +1
Query: 16 LETRLKIFISNLSNKFV-MSKTPIKELAINFVPREITTPNKDQPGLSKTVFSHVSSFHSL 192
+E ++ +L++K V ++K + L + P L ++ S VS S
Sbjct: 747 MEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSVLASK 806
Query: 193 LIDWVKLKDK-GSKFCKGISSVKLHEYNDDYYPHLLKPLTEGLVEIIDSFQNIIEGIKIL 369
L + VK K+K S+ + S V + + LLK + + E++ FQ E + +
Sbjct: 807 LKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEM 866
Query: 370 KNQLDSLSKLQ 402
K +S SKL+
Sbjct: 867 KRYAESSSKLE 877
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,271,561
Number of Sequences: 237096
Number of extensions: 1619032
Number of successful extensions: 2908
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2908
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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