Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9b08
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.3  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    23   3.8  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   5.1  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   5.1  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   5.1  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   5.1  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   5.1  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   5.1  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   5.1  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   5.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   5.1  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   6.7  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +3

Query: 132 REKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTS 239
           R++  +P SS+ +  ++ +VG  +    +EN +G+S
Sbjct: 96  RKQTIDPLSSNTQITRKRRVGIVENQYAVENNTGSS 131


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 16/92 (17%), Positives = 36/92 (39%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIEL 218
           Y+K    ++K  +  +    E+ + K   + RE+    Y +++   K  +   ++    +
Sbjct: 245 YRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQRSYKNENSYRKYRETSKERSRDRI 304

Query: 219 ENGSGTSESSTVVKIDTVNPIHALKLPKNITY 314
           E     S    ++   + N IH     K + Y
Sbjct: 305 ER--ERSREPKIISSLSNNTIHNNNYNKKLYY 334


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/55 (18%), Positives = 24/55 (43%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+    Y +++   K  K   ++
Sbjct: 12  YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKER 66


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/55 (18%), Positives = 24/55 (43%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+    Y +++   K  K   ++
Sbjct: 12  YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKER 66


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/55 (18%), Positives = 24/55 (43%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+    Y +++   K  K   ++
Sbjct: 12  YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKER 66


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/55 (18%), Positives = 24/55 (43%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+    Y +++   K  K   ++
Sbjct: 12  YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKER 66


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/55 (18%), Positives = 24/55 (43%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+    Y +++   K  K   ++
Sbjct: 12  YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKER 66


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/55 (18%), Positives = 24/55 (43%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+    Y +++   K  K   ++
Sbjct: 12  YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKER 66


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 19/105 (18%), Positives = 43/105 (40%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIEL 218
           Y+K+  + K +    +    E+ N K   + RE+  N Y ++ +  K  +   ++     
Sbjct: 12  YRKDRRYEKLHNEKEKL-LEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRT 70

Query: 219 ENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSSDHSVLKELF 353
           E     S    ++   + N IH      N    + ++++  K+L+
Sbjct: 71  ER--ERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 19/105 (18%), Positives = 43/105 (40%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIEL 218
           Y+K+  + K +    +    E+ N K   + RE+  N Y ++ +  K  +   ++     
Sbjct: 12  YRKDRRYEKLHNEKEKL-LEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRA 70

Query: 219 ENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSSDHSVLKELF 353
           E     S    ++   + N IH      N    + ++++  K+L+
Sbjct: 71  ER--ERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/55 (18%), Positives = 25/55 (45%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+  N Y ++ +  K  +   ++
Sbjct: 12  YRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEKEYRKYRETSKER 66


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/55 (18%), Positives = 25/55 (45%)
 Frame = +3

Query: 39  YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKK 203
           Y+K    ++K  +  +    E+ + K   + RE+  N Y ++ +  K  +   ++
Sbjct: 12  YRKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKER 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,610
Number of Sequences: 438
Number of extensions: 4241
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)