Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9a24
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 49 7e-07
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 41 2e-04
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 33 0.048
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 32 0.063
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 29 0.45
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 29 0.59
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 29 0.78
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 28 1.4
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 27 1.8
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 27 3.1
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.1
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 26 4.2
SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase |Schi... 26 4.2
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 26 4.2
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 25 7.3
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 25 9.6
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 25 9.6
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 48.8 bits (111), Expect = 7e-07
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 343 TGMAFGF-SAVALPQLQNPNSTL--FISEDQASWIASLSSAGTPIGCILSGYLMDLIGRR 513
+G+ FG+ + V L S L +S Q I S +S I SG+L D +GR+
Sbjct: 91 SGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRK 150
Query: 514 XXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARVY 654
G ++++ S N+ MM +GR +VG+G G+ +Y
Sbjct: 151 RLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMY 197
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/114 (24%), Positives = 51/114 (44%)
Frame = +1
Query: 313 SFLANLGTINTGMAFGFSAVALPQLQNPNSTLFISEDQASWIASLSSAGTPIGCILSGYL 492
+F A +G + G G + AL + ++ +I S +S G +G I++G L
Sbjct: 91 AFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGAL 150
Query: 493 MDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARVY 654
D GR+ G I+ T+ ++ M +GR ++G+G G+ +Y
Sbjct: 151 ADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLY 204
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 32.7 bits (71), Expect = 0.048
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 391 NP-NSTLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILIS 567
NP T S + I + + G+ GCILS LMD IG+R G IL
Sbjct: 45 NPVTDTYSYSSARQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQV 104
Query: 568 TSV-NIPMMYIGRLLVGFGSGMVGAPA 645
T+V + + + ++ G G + A
Sbjct: 105 TAVPSWVQIMVAKIWTGLAIGALSVLA 131
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 32.3 bits (70), Expect = 0.063
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 403 TLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWIL-ISTSVN 579
T S + + + + GT +GC+LS L D G+R G I+ ++T +
Sbjct: 50 TYSYSSARQGLLVGMVNTGTTVGCLLSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPS 109
Query: 580 IPMMYIGRLLVGFGSGMVGAPARVY 654
M + ++ G G G + A Y
Sbjct: 110 WVQMMVAKIWTGLGIGALSVIAPGY 134
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 29.5 bits (63), Expect = 0.45
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 IASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV-NIPMMYIGRLLV 612
I + + G+ GC LS LMD IG+R G IL T+V + + + ++
Sbjct: 61 ITGMVNVGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWT 120
Query: 613 GFGSGMVGAPA 645
G G + A
Sbjct: 121 GLSIGALSVLA 131
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 29.1 bits (62), Expect = 0.59
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +1
Query: 478 LSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARV 651
L G L D+ GRR G S ++P + + R L G G G +G + +
Sbjct: 85 LYGRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSI 142
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 28.7 bits (61), Expect = 0.78
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +1
Query: 391 NP-NSTLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILIS 567
NP T S + I + + G+ GC++S D IG+R G I+
Sbjct: 45 NPVTDTYSYSSARQGLITGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQV 104
Query: 568 TSV-NIPMMYIGRLLVGFGSGMVGAPARVY 654
T+V + + + ++ G G G + A Y
Sbjct: 105 TAVPSWVQIMVAKIWTGLGIGALSVLAPGY 134
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 412 ISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV-NIPM 588
+S + + + + G+ GCI+S + D G+R G I+ T+V +
Sbjct: 57 LSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWVQ 116
Query: 589 MYIGRLLVGFGSGMVGAPARVY 654
+ + ++ G G G + A Y
Sbjct: 117 IMVAKIWTGIGIGALSVLAPGY 138
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 631 PYPNRSQPAAYLYTSWEYLQRSKSESIRE 545
P+P++ PAAY+ + S+ +S+RE
Sbjct: 41 PHPHKEHPAAYVAAKTGFNATSRRQSVRE 69
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 63 Y*SRASQSSCSDIYQVHHHFSDNLHTFDTITERTNCDNNDGREERISA 206
Y +R SS S H++D T D I +T + DG +E+ ++
Sbjct: 934 YSNRKQASSESSPESQSTHYNDYEGTEDNIVRQTTTVDEDGHQEQTTS 981
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 251 STFLVIVAGTPFLMNGADSFFSSVIVITVCPFS 153
ST+ ++GTP + NG + F+S + + + P+S
Sbjct: 560 STYRWCLSGTP-MQNGVEEFYSLIKFLRIKPYS 591
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/68 (25%), Positives = 24/68 (35%)
Frame = +1
Query: 424 QASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGR 603
Q SW A+ L G D+ GR+ G L TS ++ + R
Sbjct: 125 QVSWTATAYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQLVAAR 184
Query: 604 LLVGFGSG 627
+ G G G
Sbjct: 185 AIAGIGGG 192
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 163 QTVITMTEEKNESAPFIKNGVPATITKKVLIEK 261
Q + T +K ES F+ VP + K+L+EK
Sbjct: 533 QVLRNFTCQKEESVDFLLKMVPMELLAKILLEK 565
>SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -2
Query: 605 SLPIYIMGI---FTEVEIRIHPRMRGISVSI 522
S+P+Y +G + E +HPR++G+S+++
Sbjct: 194 SIPLYHIGFNFAYAERHFVMHPRVKGVSMAV 224
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 415 SEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV 576
S + I + + G+ GC+LS + D IG+R G I+ T+V
Sbjct: 22 SSSRQGLITGMVNVGSFFGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTV 75
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 596 IYIMGIFTEVEIRIHPRMRGISVSIK 519
I + GIF V +R++PRMR + K
Sbjct: 410 IEVTGIFRCVPVRLNPRMRTVKSLFK 435
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 335 VPKLAKNEAKTCFRAFPRPSFPGLHFSIST 246
+P A +K CF P F GLHF+ ST
Sbjct: 244 IPGDAVEVSKVCFN---HPEFAGLHFTGST 270
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 394 PNSTLFISEDQASWIASLSSAGTPIGCILSGYLMDL 501
P++ L + SW L S G + GYL+DL
Sbjct: 347 PSTILETLQQLVSWEIQLDSVGFKDIAVYQGYLLDL 382
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,833,620
Number of Sequences: 5004
Number of extensions: 58440
Number of successful extensions: 180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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