Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9a21
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.72 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   3.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.8  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   5.0  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   6.7  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +2

Query: 431  NMERKIENNFETNKIRTSRNDSR--TLPFYVHDVHVYFKSGGTKYAPGKGLQS 583
            +++R    N+  +K+   RN S   TLP        Y  + G  YAP + L S
Sbjct: 1202 SLDRSSIRNWYPDKLTVQRNPSAATTLPTRPDYARTYRAAAGQDYAPPRALMS 1254


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +2

Query: 503  LPFYVHDVHVYFKSGGTKYAPGKGLQSQF*LRRRYL*PFEIKEHNRTRRRSEQRSI 670
            LP +++DV +  K+G T+       Q    L  +YL P ++ E  +   +S+ + +
Sbjct: 867  LPDWLYDVDL--KNGDTETISASEEQFWIELIEKYLKPLDLSEKQKEEMKSQLKGL 920


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 524  HHVHKKAGFYCRFSKYVFYLFQNYF 450
            H  +K + +Y ++ K   +LF++YF
Sbjct: 961  HQEYKSSDYYYKYYKQYPHLFKDYF 985


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 180 GIKRDMGVRRCIRVARISTATIIQVSLSTTPLLINM 73
           G + D+G +  IRV      T  +  L T PL  N+
Sbjct: 237 GYEADVGSKTTIRVVNSQVVTKPEYQLLTAPLFRNV 272


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -2

Query: 162 GVRRCIRVARISTATIIQVSLSTTPLLINM*LIYLLTLRVTHQ 34
           G+ +CIR+   S  +++ +   T  L  ++ LIYL  + ++ Q
Sbjct: 254 GLLKCIRLLNTSIRSMLMLQWLTCVLNWSISLIYLTNVGISLQ 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,977
Number of Sequences: 2352
Number of extensions: 10629
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)