Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9a20
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 52 3e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 52 3e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 48 6e-06
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 46 3e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 46 3e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 45 6e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 45 6e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 45 6e-05
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 45 6e-05
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 44 1e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 43 2e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 0.001
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 41 0.001
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 41 0.001
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 41 0.001
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 41 0.001
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.002
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 0.002
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.004
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.007
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 37 0.016
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 37 0.016
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 37 0.016
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 37 0.016
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 37 0.016
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 37 0.016
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 36 0.021
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.021
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.021
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 36 0.028
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.049
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 35 0.049
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 35 0.049
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 35 0.049
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 35 0.064
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 34 0.085
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 34 0.085
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 34 0.085
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 34 0.085
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 34 0.085
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 34 0.085
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.085
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.11
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 33 0.15
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 33 0.15
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.20
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.20
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.20
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 32 0.45
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.45
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.8
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 30 1.8
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 2.4
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 2.4
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 2.4
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 3.2
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 29 3.2
AF125954-4|AAD14710.1| 337|Caenorhabditis elegans Seven tm rece... 29 4.2
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 29 4.2
AC006769-5|AAF60577.2| 339|Caenorhabditis elegans Hypothetical ... 29 4.2
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 28 5.6
U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical pr... 28 5.6
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 28 5.6
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 28 7.4
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 28 7.4
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 28 7.4
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 27 9.8
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 27 9.8
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 27 9.8
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 91.1 bits (216), Expect = 7e-19
Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Frame = +1
Query: 394 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKA 555
S T L++NY+P+ MT++ + +LF+++G+IESCKL+ ++ GYGFV Y + EDA +A
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 556 RAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMT 696
++FNGL +Q KT+KVS+A + S+ SNLY+S +P MT
Sbjct: 100 VSSFNGLRLQNKTIKVSYA------RPSNDQIKGSNLYVSGIPKSMT 140
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Frame = +1
Query: 379 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 540
+N + + L V+ IP+ MT + ++F G+I + +++++ +G GFV ++K +
Sbjct: 121 SNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKD 180
Query: 541 DAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKP 648
+A+ A NG + G + +++ N N S+ P
Sbjct: 181 EADVAIKTLNGSIPSGCSEQITVKFAN--NPASNNP 214
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 445 MMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSF 609
+++ LFS G I + K++ + +GY FV + +A A + NG + GKTL+V F
Sbjct: 389 LLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVF 448
Query: 610 ALLNP 624
P
Sbjct: 449 KSSTP 453
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 564
P +L V+ IP + A+F +G + ++I N +G+GFV + +DA++ARA
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 565 FNGLLMQGKTLKVSFALLNPENK 633
FNG ++G+ ++V+ A NK
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 564
P +L V+ IP + A+F +G + ++I N +G+GFV + +DA++ARA
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 565 FNGLLMQGKTLKVSFALLNPENK 633
FNG ++G+ ++V+ A NK
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAA 564
++ V +IP + D + LF GKI +L+ A+RGY FV Y EDA A
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 565 FNG-LLMQGKTLKVSFALLNPENKVSHKPDTES 660
++G + GK LKV+ ++ N + + P T+S
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKS 293
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +1
Query: 376 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKA 555
D +T L + I E +T + + LF ++ K + + Y F+ + + +D KA
Sbjct: 369 DEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKV--KDYAFIHFNERDDCLKA 426
Query: 556 RAAFNGLLMQGKTLKVSFALLNPENKVSHKP 648
+NG ++G ++ S A P + KP
Sbjct: 427 MEEWNGKELEGTVVEASLA--KPPQEKKKKP 455
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 564
P +L V+ IP + +F G + ++I N +G+GFV E+ +DAE+AR
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQE 211
Query: 565 FNGLLMQGKTLKVSFALLNPENK 633
+G +++G+ ++V+ A +K
Sbjct: 212 LHGSMIEGRKIEVNCATARVHSK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 564
P +L V+ IP + +F G + ++I N +G+GFV E+ +DAE+AR
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQE 211
Query: 565 FNGLLMQGKTLKVSFALLNPENK 633
+G +++G+ ++V+ A +K
Sbjct: 212 LHGSMIEGRKIEVNCATARVHSK 234
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = +1
Query: 457 LFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNP 624
+F +G + ++I N +G+GFV + +DA++ARA FNG ++G+ ++V+ A
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 625 ENK 633
NK
Sbjct: 61 HNK 63
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 382 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAEK 552
N + P L V + +T D + LF+ +G + K+I +N Y FVE+ H A +
Sbjct: 40 NGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQ 99
Query: 553 ARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYI 672
A N L+ + +KV++A + P + S K DT + ++
Sbjct: 100 ALQTMNKRLLLDREMKVNWA-VEPGQQQS-KIDTTRHFHV 137
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = +1
Query: 460 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 621
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Query: 622 P--ENKVSH 642
P + K SH
Sbjct: 215 PGDQEKPSH 223
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 385 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 564
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 236 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 294
Query: 565 FNGLLMQGKTLKVSF 609
N + G+ ++ S+
Sbjct: 295 MNNQDVGGQLVRCSW 309
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFN 570
++ V+ IP + A+F A G++ S +++ N +G+GFV + E EKARAA +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 571 GLLMQGKTLKVSFA-------LLNPENKVSHKP 648
+QG+ ++V A + NP+N+V P
Sbjct: 112 ESHVQGRIIEVRRATPTRRKLINNPQNEVLPPP 144
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 571 GLLMQGKTLKV-SFALLNPENK-VSHKPDTESNLYISN 678
G+L+ GK + V F N+ + +N+Y+ N
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKN 219
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 528
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 681
++ DAE+A N + GK +++ ++ +P + S N++I NL
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRS----GAGNIFIKNL 127
Score = 34.3 bits (75), Expect = 0.085
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 571 GLLMQGKTLKVS 606
++ K L V+
Sbjct: 379 SKMVCSKPLYVA 390
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 571 GLLMQGKTLKV-SFALLNPENK-VSHKPDTESNLYISN 678
G+L+ GK + V F N+ + +N+Y+ N
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKN 156
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 315
Query: 571 GLLMQGKTLKVSFA 612
++ K L V+ A
Sbjct: 316 SKMVCSKPLYVAIA 329
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 571 GLLMQGKTLKV-SFALLNPENK-VSHKPDTESNLYISN 678
G+L+ GK + V F N+ + +N+Y+ N
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKN 219
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 528
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 681
++ DAE+A N + GK +++ ++ +P + S N++I NL
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRS----GAGNIFIKNL 127
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 571 GLLMQGKTLKVSFA 612
++ K L V+ A
Sbjct: 379 SKMVCSKPLYVAIA 392
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFN 570
++ V+ IP + A+F A G++ S +++ N +G+GFV + E EKARAA +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 571 GLLMQGKTLKVSFA-------LLNPENKVSHKP 648
+QG+ ++V A + NP+N+V P
Sbjct: 112 ESHVQGRIIEVRRATPTRRKLINNPQNEVLPPP 144
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +1
Query: 415 NYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKT 594
N ++TRD + LF GKI + A +G+GFV++ + A+++ + NG+ +
Sbjct: 89 NIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGMSWKACC 148
Query: 595 LKVSFALLNPENKVSHKPDTESN 663
L V A+L K + + N
Sbjct: 149 LDVHLAMLGSLRKPTGNEGRQGN 171
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 382 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARA 561
+T T + V I + T + LFS G I ++ + Y FV YEK E A KA
Sbjct: 231 STKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIM 290
Query: 562 AFNGLLMQGKTLKVSFALLN--PENKVSHKPDTESNLYISNLPP 687
NG M G ++ S+ P ++ P S+L + + P
Sbjct: 291 EMNGKEMAGNQVRCSWGRTQAVPNQALNPLPIDLSSLMMPTMLP 334
Score = 34.7 bits (76), Expect = 0.064
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Frame = +1
Query: 433 MTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKT 594
++ +++ + F+ G++ K+I + +GYGFV + ++AE A A NG + +
Sbjct: 146 VSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRA 205
Query: 595 LKVSFA 612
++ ++A
Sbjct: 206 VRTNWA 211
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Frame = +1
Query: 382 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHED 543
NT S T L + + D++ + S G I S K I ++ GYGFV++ E
Sbjct: 101 NTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF---ES 157
Query: 544 AEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMT 696
+ A AA +GL +G +++ K+ + +NLYI+NLP D T
Sbjct: 158 PQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFT 200
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEKARA 561
PT L + +P T M+ + G + S +++ +RG GF + E E +
Sbjct: 187 PTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIIS 246
Query: 562 AFNG 573
A NG
Sbjct: 247 ALNG 250
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 567
+ V + E ++ +++ L G + S + +R G+GFVE+ EDA+ A
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 568 NGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDM 693
N + + GK +KV+ A + +N D +N+++ NL P++
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEV 111
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 567
+ V + E ++ +++ L G + S + +R G+GFVE+ EDA+ A
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 568 NGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDM 693
N + + GK +KV+ A + +N D +N+++ NL P++
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEV 121
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Frame = +1
Query: 382 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHED 543
+T +S T L + + D++ + S G I S K I ++ GYGFV++ E
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF---ES 131
Query: 544 AEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMT 696
+ A AA +GL +G +++ K+ + +NLYI+NLP D T
Sbjct: 132 PQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFT 174
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEKARA 561
PT L + +P T M+ + G + S +++ +RG GF + E E +
Sbjct: 161 PTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIIS 220
Query: 562 AFNG 573
A NG
Sbjct: 221 ALNG 224
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = +1
Query: 460 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 621
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 42 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101
Query: 622 P--ENKVSH 642
P + K SH
Sbjct: 102 PGDQEKPSH 110
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 385 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 564
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 123 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 181
Query: 565 FNGLLMQGKTLKVSF 609
N + G+ ++ S+
Sbjct: 182 MNNQDVGGQLVRCSW 196
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = +1
Query: 460 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 621
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 52 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Query: 622 P--ENKVSH 642
P + K SH
Sbjct: 112 PGDQEKPSH 120
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 385 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 564
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 133 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 191
Query: 565 FNGLLMQGKTLKVSF 609
N + G+ ++ S+
Sbjct: 192 MNNQDVGGQLVRCSW 206
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = +1
Query: 460 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 621
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 123 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
Query: 622 P--ENKVSH 642
P + K SH
Sbjct: 183 PGDQEKPSH 191
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 385 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 564
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 204 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 262
Query: 565 FNGLLMQGKTLKVSF 609
N + G+ ++ S+
Sbjct: 263 MNNQDVGGQLVRCSW 277
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +1
Query: 460 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 621
F G++ K+I + +GYGFV Y + EDAE+A NG + +T++ ++A
Sbjct: 152 FVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
Query: 622 PE 627
P+
Sbjct: 212 PD 213
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +1
Query: 379 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAE 549
A+ + P L V + +T + + LF+ +G + K+I N Y FVE+ H A
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQAT 92
Query: 550 KARAAFNGLLMQGKTLKVSFALLNPE-NKVSHKPDTESNLYI 672
A + NG + K + V++A E + KP+T + ++
Sbjct: 93 LALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHV 134
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
+ + + ++ +Y FS G I SCK+ + +GYGFV +E A+ A N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 571 GLLMQGKTLKV 603
G+L+ K + V
Sbjct: 207 GMLLSDKKVYV 217
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
L V I E + D + FS+ G I S K++ + +G+GFV +EK E+A A N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 571 GLLMQGKTLKVSFA 612
++ K L V+ A
Sbjct: 405 SKMIGAKPLYVALA 418
Score = 34.7 bits (76), Expect = 0.064
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +1
Query: 364 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 525
N G N S L + + ++ M++ FS G + S ++ + GY +V
Sbjct: 45 NIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVN 104
Query: 526 YEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 681
+++ DAE+A N ++ G+ +++ ++ +P + + N++I NL
Sbjct: 105 FQQPADAERALDTMNFEVIHGRPMRIMWSQRDP----AARRAGNGNIFIKNL 152
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
+ + + ++ +Y FS G I SCK+ + +GYGFV +E A+ A N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 571 GLLMQGKTLKV 603
G+L+ K + V
Sbjct: 207 GMLLSDKKVYV 217
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
L V I E + D + FS+ G I S K++ + +G+GFV +EK E+A A N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 571 GLLMQGKTLKVSFA 612
++ K L V+ A
Sbjct: 405 SKMIGAKPLYVALA 418
Score = 34.7 bits (76), Expect = 0.064
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +1
Query: 364 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 525
N G N S L + + ++ M++ FS G + S ++ + GY +V
Sbjct: 45 NIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVN 104
Query: 526 YEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 681
+++ DAE+A N ++ G+ +++ ++ +P + + N++I NL
Sbjct: 105 FQQPADAERALDTMNFEVIHGRPMRIMWSQRDP----AARRAGNGNIFIKNL 152
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 394 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 558
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 559 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 660
A NG+ + K L V A N + ++ P++ S
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 382
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 394 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 558
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 559 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 660
A NG+ + K L V A N + ++ P++ S
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 382
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 394 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 558
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 264 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 323
Query: 559 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 660
A NG+ + K L V A N + ++ P++ S
Sbjct: 324 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 357
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 394 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 558
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 267 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 326
Query: 559 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 660
A NG+ + K L V A N + ++ P++ S
Sbjct: 327 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 360
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG--YGFVEYEKHEDAEKARAAFNGL 576
K+ V +P + + +F G+I+ + + RG + FVE+E H DAE A A +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 577 LMQGKTLKVSF 609
G+ ++V F
Sbjct: 70 EFDGRRIRVEF 80
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG--YGFVEYEKHEDAEKARAAFNGL 576
K+ V +P + + +F G+I+ + + RG + FVE+E H DAE A A +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 577 LMQGKTLKVSF 609
G+ ++V F
Sbjct: 70 EFDGRRIRVEF 80
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +1
Query: 394 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKA 555
S + V I ++ D + ++FS G + S K++ +R GYGF+E+ + AE A
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 556 RAAFNGLLMQGKTLKVSFA 612
NG + G+ L+V A
Sbjct: 76 IRNLNGYELSGRILRVDSA 94
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +1
Query: 412 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 573
V +P T + + F+A+G + + +++ +R G+ FVE+ + A++A NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 574 LLMQGKTLKVSFA 612
+ G+ L+V++A
Sbjct: 70 VAFNGRNLRVNYA 82
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 502 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKP 648
+RG+GFVE++ EDA A N + GKT++V+FA + S KP
Sbjct: 51 HRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKP 99
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 391 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEK 552
+S + V P T D + FS G + + +++ +R G+ FVE+ + A++
Sbjct: 1 MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQR 60
Query: 553 ARAAFNGLLMQGKTLKVSFA 612
A FNG+ G+ L+V+ A
Sbjct: 61 AVDQFNGVDFNGRALRVNLA 80
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 337 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 504
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 96 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 152
Query: 505 --RGYGFVEYEKHEDAEK 552
RG+GFV ++ H+ ++
Sbjct: 153 KPRGFGFVTFDDHDSVDQ 170
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 528
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 681
++ DAE+A N + GK +++ ++ +P + S N++I NL
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRS----GAGNIFIKNL 127
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 570
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 318
Query: 571 GLLMQGKTLKVSFA 612
++ K L V+ A
Sbjct: 319 SKMVCSKPLYVAIA 332
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 337 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 504
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 58 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 114
Query: 505 --RGYGFVEYEKHEDAEK 552
RG+GFV ++ H+ ++
Sbjct: 115 KPRGFGFVTFDDHDSVDQ 132
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 337 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 504
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 58 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 114
Query: 505 --RGYGFVEYEKHEDAEK 552
RG+GFV ++ H+ ++
Sbjct: 115 KPRGFGFVTFDDHDSVDQ 132
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 337 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 504
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 96 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 152
Query: 505 --RGYGFVEYEKHEDAEK 552
RG+GFV ++ H+ ++
Sbjct: 153 KPRGFGFVTFDDHDSVDQ 170
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 337 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 504
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 96 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 152
Query: 505 --RGYGFVEYEKHEDAEK 552
RG+GFV ++ H+ ++
Sbjct: 153 KPRGFGFVTFDDHDSVDQ 170
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 376 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 537
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 233 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 292
Query: 538 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTE 657
+ E+A + +L+ + + V F+ +N +KP ++
Sbjct: 293 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 331
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 412 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 573
V P T + + FS++G+I + +++ +R G+ F+E+ + A++A NG
Sbjct: 9 VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68
Query: 574 LLMQGKTLKVSFA 612
G+ L+V+ A
Sbjct: 69 AEFNGRPLRVNLA 81
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 376 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 537
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 233 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 292
Query: 538 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTE 657
+ E+A + +L+ + + V F+ +N +KP ++
Sbjct: 293 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 331
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 376 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 537
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 164 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 223
Query: 538 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTE 657
+ E+A + +L+ + + V F+ +N +KP ++
Sbjct: 224 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 262
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 505 RGYGFVEYEKHEDAEKARAAFNGLLMQG-KTLKVSFALLNPENKVSHKPDTESNLYISNL 681
+GY F+E+ ++A + NG + G K ++ + N S+ P++E NL++S++
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFNLCFAND----SYNPNSEFNLHVSSV 163
Query: 682 PPDM 693
P DM
Sbjct: 164 PDDM 167
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 388 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEK 552
N PT ++V + + M+ +F + G+IE L NRG+ + + +DA+K
Sbjct: 123 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 182
Query: 553 ARAAFNGLLMQGKTLKVS 606
+ N + G+ +++S
Sbjct: 183 SCEQLNNFELAGRCIRLS 200
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 388 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEK 552
N PT ++V + + M+ +F + G+IE L NRG+ + + +DA+K
Sbjct: 268 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 327
Query: 553 ARAAFNGLLMQGKTLKVS 606
+ N + G+ +++S
Sbjct: 328 SCEQLNNFELAGRCIRLS 345
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +1
Query: 379 ANTNVSPTK-LMVNYIPELMTRDMMYALFSAMGKIESCKLI-------ANRGYGFVEYEK 534
A + SP K +++ + + + + +FS G I++ L +RGYG+VEY+
Sbjct: 125 AARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDN 184
Query: 535 HEDAEKARAAFNGLLMQGKTLKVSFAL 615
EDAEK+ +G + G + V +
Sbjct: 185 LEDAEKSIKHMDGGQIDGMAVHVEMTI 211
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.049
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 567
+ V I E T D ++ FS GKI++ L +R GY VEYE ++A +A
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 568 NGLLMQGKTLKVSFALL 618
N + G+ +KV + +
Sbjct: 117 NDTDLLGQNVKVDWCFV 133
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.049
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Frame = +1
Query: 400 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 561
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 562 AFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES--NLYISNLPPDMT 696
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLS 219
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +1
Query: 424 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 585
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 586 GKTLK 600
G+ L+
Sbjct: 275 GQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.1 bits (77), Expect = 0.049
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Frame = +1
Query: 400 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 561
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 562 AFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES--NLYISNLPPDMT 696
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLS 219
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +1
Query: 424 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 585
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 586 GKTLKVSFALLNPE 627
G+ L+V + P+
Sbjct: 275 GQYLRVGKCVTPPD 288
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.1 bits (77), Expect = 0.049
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Frame = +1
Query: 400 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 561
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 562 AFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES--NLYISNLPPDMT 696
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLS 219
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +1
Query: 424 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 585
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 586 GKTLKVSFALLNPE 627
G+ L+V + P+
Sbjct: 275 GQYLRVGKCVTPPD 288
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 34.7 bits (76), Expect = 0.064
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 364 NGGGD---ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEK 534
NG G A T + +++ +P T ++ G+++S ++A G + +
Sbjct: 370 NGAGGLAGAATPQATRVIIIRNLPSDYTWQIVRDRVRNFGEVDSVDMMAP-GAARIRFAT 428
Query: 535 HEDAEKARAAFNGLLMQGKTLKVSFA 612
+DAE+ARAA G ++G+ + V +A
Sbjct: 429 FQDAERARAALYGSTVEGRMISVDYA 454
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.3 bits (75), Expect = 0.085
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 388 NVSPTKLM-VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDA 546
N P+K + V + T + +F G+I C L+ +R G+GF+ + EDA
Sbjct: 71 NPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDA 130
Query: 547 EKARAAFNGLLMQGKTLKVSFAL 615
AR + G ++V F+L
Sbjct: 131 TAARDKLCNTDLDGHKIRVDFSL 153
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.085
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEYEKHEDAEKARAAF 567
L + ++P+ + +F+ G I S K+ +R +GFV Y+ ++ A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 568 NGLLMQGKTLKVSFALLNPENK 633
NG + K LKV L P N+
Sbjct: 491 NGFQIGMKRLKVQ--LKRPRNE 510
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 412 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 573
V +P+ M D + LF +G++ + ++ G+ FV +E +DA +A A N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 574 LLMQGKTLKVSF 609
+ M LKV +
Sbjct: 240 IRMYHMVLKVEW 251
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.085
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 528
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 325 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 383
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 633
E + A A +A NG + K LKV + NP N+
Sbjct: 384 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 420
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 34.3 bits (75), Expect = 0.085
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 528
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 633
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 34.3 bits (75), Expect = 0.085
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 528
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 633
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 34.3 bits (75), Expect = 0.085
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 528
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 418 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 476
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 633
E + A A +A NG + K LKV + NP N+
Sbjct: 477 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 513
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 34.3 bits (75), Expect = 0.085
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 367 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 528
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 529 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 633
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.085
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEYEKHEDAEKARAAF 567
L + ++P+ + +F+ G I S K+ +R +GFV Y+ ++ A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 568 NGLLMQGKTLKVSFALLNPENK 633
NG + K LKV L P N+
Sbjct: 491 NGFQIGMKRLKVQ--LKRPRNE 510
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKARA 561
+L++ +P ++ + L S +GK L +R G+GF+++ + DAEK R
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 562 AFNGLLMQGKTLKVSFAL 615
FN + G+++ +AL
Sbjct: 156 FFNTNKVLGRSVAADWAL 173
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 502 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 612
++G+GFV + + DAE A +G L+ G+ L+V+ A
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 502 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 612
++G+GFV + + DAE A +G L+ G+ L+V+ A
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 576
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 577 LMQGKTLKVSFA 612
+ G +V +
Sbjct: 63 RICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 576
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 577 LMQGKTLKVSFA 612
+ G +V +
Sbjct: 63 RICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 576
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 577 LMQGKTLKVSFA 612
+ G +V +
Sbjct: 63 RICGVRARVELS 74
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +1
Query: 460 FSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSF 609
F A GKI+ ++ + RGY F+EY + A +G+ + GK L V +
Sbjct: 124 FEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDY 178
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 400 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARA 561
TK+ V +P + ++ F G IE +I +R GYGFV + AE+A
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Query: 562 AFNGLLMQGKTLKVSFALLNPENKVS 639
N ++ G+ V+ A L + + +
Sbjct: 95 DPNPII-DGRKANVNLAYLGAKPRTN 119
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.79
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 439 RDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALL 618
RD+ + F GK+ +I G+GFV+++ DA+ A NG + G+ + + F
Sbjct: 16 RDVEH-FFRGYGKLSD--VIMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVILEF--- 69
Query: 619 NPENKVSHKPD 651
P KV + +
Sbjct: 70 -PRRKVGYNEE 79
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 460 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 612
F G+I ++ G+GFVE++ DAE A NG + G+ + + ++
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 460 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 612
F G+I ++ G+GFVE++ DAE A NG + G+ + + ++
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 460 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 612
F G+I ++ G+GFVE++ DAE A NG + G+ + + ++
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +1
Query: 343 TMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-RGYGF 519
T + E G N+ L + IPE + + +FS + + + N + + F
Sbjct: 128 TQKEPQETDGPGLPNNI----LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAF 183
Query: 520 VEYEKHEDAEKARAAF-NGLLMQGKTLKVSFA 612
+EYE + +E AR A N + + + V FA
Sbjct: 184 IEYESEDLSEPARQALDNFRITPTQQITVKFA 215
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 472 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 603
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 472 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 603
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 472 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 603
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA- 561
K+ + + T + M F GK+E L+ +RG+GFV ++ E A+K
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 562 ---AFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPD 690
NG +++ K + +L P + NLY +PP+
Sbjct: 195 HFHEINGKMVECKKAQPKEVML-PVQLNKSRAAAARNLY--GMPPE 237
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 391 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA---NRGYGFVEYEKHEDAEKARA 561
++P +L +N +P + +F + I+ ++ F+ + EDA+ A A
Sbjct: 635 INPLQLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPNSKKRAFITFGTVEDAQAAFA 694
Query: 562 AFNGLLMQGKTLKVSFALLNPENKVSHKP 648
NGL + + V +A + E KV KP
Sbjct: 695 KSNGLKVNNHLVDVFYA-RHQETKVDVKP 722
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = +1
Query: 403 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA- 561
K+ + + T + M F GK+E L+ +RG+GFV ++ E A+K
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 562 ---AFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPD 690
NG +++ K + +L P + NLY +PP+
Sbjct: 195 HFHEINGKMVECKKAQPKEVML-PVQLNKSRAAAARNLY--GMPPE 237
>AF125954-4|AAD14710.1| 337|Caenorhabditis elegans Seven tm
receptor protein 119 protein.
Length = 337
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 194 CEPATPSFSYDNNFCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSVVTIK-EQCKTI 358
CE TP +++ + SL F+Y+ + Q YYY+ C V+ I QC +I
Sbjct: 149 CEQPTP---FNSEYLRESLKFYYDEDSYAVAQLSAVYYYYDKCGVLVIHWLQCFSI 201
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 28.7 bits (61), Expect = 4.2
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Frame = +1
Query: 343 TMQNDMENGGGDANTNVSPTKLMVNYI----PELMTRDMMYALFSAMGKIESCK-----L 495
T+ NDME+ T+ PT+ N + E T + ++ +G +ES K
Sbjct: 237 TIVNDMEDDSSYTKTSTMPTEETTNSLESTSSESFTAESTSSISPILGTLESIKQEDFTT 296
Query: 496 IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYIS 675
+ + E + E ++ + NG Q L++ + +PE S + + + ++
Sbjct: 297 LLDDLITSAERDPTETVQRT-SEINGAFTQNSILELDH-VTSPETSTSESGNDDLDAIVN 354
Query: 676 NLPPD 690
NL D
Sbjct: 355 NLDED 359
>AC006769-5|AAF60577.2| 339|Caenorhabditis elegans Hypothetical
protein Y45G12C.10 protein.
Length = 339
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 194 CEPATPSFSYDNNFCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSVVTIK-EQCKTI 358
CE TP +++ + SL F+Y+ + Q YYY+ C V+ I QC +I
Sbjct: 151 CEQPTP---FNSEYLRESLKFYYDEDSYAVAQLSAVYYYYDKCGVLVIHWLQCFSI 203
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 558
P ++ V P T + F ++ K++ + +GYGF+ +E + AE+ R
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIR 123
>U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical
protein C30G12.4 protein.
Length = 258
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 197 EPATPSFSYDNN-FCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSVVTIKEQC 349
+PA P S +++ F CSL F Y+ V+ C YY F S+++I C
Sbjct: 85 KPACPPSSLNSHSFECCSLTFSYSYMMVS---CKLLLYYGTFSSIISIVLSC 133
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 397 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 558
P ++ V P T + F ++ K++ + +GYGF+ +E + AE+ R
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIR 124
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 504 IRYQLAALYFTHGREERVHHVA 439
IR + LYF HG EE VH+++
Sbjct: 173 IRLKKKGLYFKHGTEEDVHYLS 194
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 504 IRYQLAALYFTHGREERVHHVA 439
IR + LYF HG EE VH+++
Sbjct: 173 IRLKKKGLYFKHGTEEDVHYLS 194
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 442 DMMYALFSAMGKIESCKLIANRGY--GFVEYEKHEDAEKARAAFNGL-LMQG-KTLKVSF 609
D++Y + +A GK+ ++ VE+E E A+ A+ A NG + G TLKV F
Sbjct: 137 DVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEF 196
Query: 610 A 612
A
Sbjct: 197 A 197
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 442 DMMYALFSAMGKIESCKLIANRGY--GFVEYEKHEDAEKARAAFNGL-LMQG-KTLKVSF 609
D++Y + +A GK+ ++ VE+E E A+ A+ A NG + G TLKV F
Sbjct: 137 DVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEF 196
Query: 610 A 612
A
Sbjct: 197 A 197
>Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical
protein F28B1.2 protein.
Length = 973
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 236 CVCSLFFFYNLNEVNNVQCCEFYYYFVFCSVVTIKEQC 349
C C++ F N NNV FYY V+ +V + C
Sbjct: 315 CKCNVKLFNKKNVQNNVGGNYFYYNTVWQPIVKTNDDC 352
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Frame = +1
Query: 406 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 567
L V + D +Y LF G + + +R G+ FVEY EDAE A
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 568 NGLLMQGKTLKVSF 609
+ M + ++ +
Sbjct: 99 SNTRMDDRVIRADW 112
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +1
Query: 412 VNYIPELMTRDMMYALFSAMGKIESCKLI--ANRG---YGFVEYEKHEDAEKARAAFN-- 570
+ IP+ ++ +F GK+ C+++ +N G GFV DA++ R N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 571 GLLMQGKTLKVS 606
L+ + TLKV+
Sbjct: 77 NLIGENFTLKVT 88
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 382 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKL 495
+T+ K++V+ I +T+ + + FS GKI SC L
Sbjct: 106 HTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCIL 143
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +1
Query: 412 VNYIPELMTRDMMYALFSAMGKIESCKLI--ANRG---YGFVEYEKHEDAEKARAAFN-- 570
+ IP+ ++ +F GK+ C+++ +N G GFV DA++ R N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 571 GLLMQGKTLKVS 606
L+ + TLKV+
Sbjct: 77 NLIGENFTLKVT 88
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +1
Query: 451 YALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 603
Y F + + ++GYGFV + ED +A +G + + +K+
Sbjct: 226 YPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKL 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,347,653
Number of Sequences: 27780
Number of extensions: 313957
Number of successful extensions: 1114
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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