Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9a19
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    29   0.18 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    28   0.31 

>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -2

Query: 238 TEIFKTNYNNYLVFIINNFISN 173
           +++ K N+ +YL+ I+N+FISN
Sbjct: 88  SKLIKLNFPSYLINIVNSFISN 109


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 290 SANVCNTLSHCIICRWEY 237
           SA V N L+H I+C W+Y
Sbjct: 236 SATVQNILTHKIVCSWDY 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,167
Number of Sequences: 2352
Number of extensions: 15168
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)