BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9a16
(292 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF096897-1|AAD20450.1| 5322|Drosophila melanogaster pushover pro... 26 9.0
AE014134-1390|AAF52598.1| 5322|Drosophila melanogaster CG14472-P... 26 9.0
>AF096897-1|AAD20450.1| 5322|Drosophila melanogaster pushover protein.
Length = 5322
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -1
Query: 241 IFTVILNSTVLRYNSPGGSVEDIVVGMTVVEEKL 140
+F V+ N + +N GG+++D +V + +VE L
Sbjct: 4785 LFCVLTNQ--IEHNCIGGTLKDYIVSLGIVERSL 4816
>AE014134-1390|AAF52598.1| 5322|Drosophila melanogaster CG14472-PA
protein.
Length = 5322
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -1
Query: 241 IFTVILNSTVLRYNSPGGSVEDIVVGMTVVEEKL 140
+F V+ N + +N GG+++D +V + +VE L
Sbjct: 4785 LFCVLTNQ--IEHNCIGGTLKDYIVSLGIVERSL 4816
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,548,251
Number of Sequences: 53049
Number of extensions: 170741
Number of successful extensions: 359
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 485663193
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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