Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9a13
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0726 - 5990764-5990834,5990916-5990985,5991096-5991243,599...    30   2.1  
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892...    29   3.7  
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    29   3.7  
09_02_0570 + 10786779-10787144,10787353-10787547,10787647-107878...    28   6.4  
10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565           28   8.5  

>11_01_0726 -
           5990764-5990834,5990916-5990985,5991096-5991243,
           5991320-5991432,5991695-5991766,5991857-5991984,
           5992290-5992485,5992758-5992937,5993032-5993172,
           5993408-5993572,5993952-5994098,5994205-5994294,
           5994417-5994623,5994673-5995028,5995374-5995506
          Length = 738

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 489 MVDGNFESELHQAILL-SKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKM*CVW 665
           ++D     +L  A    SKL  EE  DVY+ ++  +D  +   EV +++  + +     W
Sbjct: 669 LIDAGIRRQLIMAFTEDSKLHVEELVDVYRLVEDQIDIPSVALEVIQDLPSVARDFMLSW 728

Query: 666 SSS 674
           S S
Sbjct: 729 SDS 731


>03_05_1014 -
           29687343-29687410,29688054-29688191,29689246-29689294,
           29689623-29689728,29690184-29690332,29690840-29690921,
           29691308-29691360,29691644-29691729,29691855-29691909,
           29692179-29692579,29693564-29693660,29694191-29694322,
           29694426-29694476,29694659-29694751,29694917-29694992,
           29695711-29695856,29696009-29696043,29696056-29696107,
           29696290-29696401,29696617-29696813,29697456-29697560,
           29697667-29697819,29698317-29698424,29698608-29698752,
           29699374-29699432,29701397-29701441,29701677-29701730,
           29701901-29702113,29702873-29702958,29704492-29704572,
           29704670-29704729,29705599-29705644,29706212-29706286,
           29706376-29706512,29708306-29708366,29708726-29708743,
           29709710-29709743,29709811-29709902,29709997-29710029
          Length = 1260

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +3

Query: 351 SNILFHCALC--LCKKAVIF*SAGKKKKTKLGESTE 452
           S+ L H A+C  LC ++ +  +  KK   K+GESTE
Sbjct: 456 SSCLLHIAMCSALCNESTLQYNPDKKCYEKIGESTE 491


>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/78 (26%), Positives = 35/78 (44%)
 Frame = +3

Query: 447 TEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSR 626
           TE +       DE+ V+   +  +   +++ K   ++KK   K+ KK     NK  +  +
Sbjct: 38  TEPKTPYHSMIDEDDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKK-KKKNKKKKKKK 96

Query: 627 NVKKLKKKM*CVWSSSTA 680
             KK KKK    W S+ A
Sbjct: 97  KKKKKKKKKKKRWPSNKA 114


>09_02_0570 +
           10786779-10787144,10787353-10787547,10787647-10787826,
           10787925-10788119,10789629-10789727,10789822-10790328,
           10790438-10790779
          Length = 627

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 21/78 (26%), Positives = 34/78 (43%)
 Frame = +3

Query: 420 KKKTKLGESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDA 599
           K   K  +   A  A+   KDE  V    +    ++ L +  DYE +    K   K+VD 
Sbjct: 409 KMPAKQAKEAPAPQAEVSPKDESRVKAIAKPSKAKSSLDADDDYEAESPKEKPKPKEVDV 468

Query: 600 ANKVAEVSRNVKKLKKKM 653
           A K+ E+ R  +  K ++
Sbjct: 469 A-KLKEIKRQEEMEKNRL 485


>10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565
          Length = 245

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 414 GKKKKTKLGESTEAQWAQWKQKD 482
           GK+K+   GES +  W QW +K+
Sbjct: 43  GKRKRYGEGESAKVLWEQWVEKN 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,476,541
Number of Sequences: 37544
Number of extensions: 303917
Number of successful extensions: 748
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)