Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9a08
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.8  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   4.1  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   9.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.5  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   9.5  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 594 VFVTSRSCAPVASDMLSFSHLYIHQFQTI 680
           VF T RS   ++ D    +++ +HQFQT+
Sbjct: 524 VFNTKRSYWKLSMDNRIMTYIALHQFQTV 552


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 488 PAVQHQREARRRAPPQHGHGVPPRSRAPAQPRHVLAEGGAA 366
           P VQ   + +  A       +PPR +   +P   +A GGA+
Sbjct: 228 PVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPGPTIATGGAS 268


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 359 SQLPVRIAACSRFNHLPVL 303
           +QLP+ I     FNH+P +
Sbjct: 311 TQLPIDIINAGTFNHVPFI 329


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 369 GSGKSTPRTHSRLQPVQPP 313
           G+ +STP T +  QPVQ P
Sbjct: 23  GTTQSTPATAAAPQPVQRP 41


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 369 GSGKSTPRTHSRLQPVQPP 313
           G+ +STP T +  QPVQ P
Sbjct: 23  GTTQSTPATAAAPQPVQRP 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,787
Number of Sequences: 2352
Number of extensions: 13804
Number of successful extensions: 248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)