Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9a08
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 29 2.5
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 29 2.5
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 29 4.4
Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 5.8
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 7.6
U80027-19|AAC48129.2| 313|Caenorhabditis elegans F-box a protei... 28 7.6
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 28 7.6
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 28 7.6
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 488 PAVQHQREARRRAPPQHGHGVPPRSRAPAQPRH 390
P Q ++ PPQH H VPP S AP +H
Sbjct: 52 PPQQPYEHPAQQHPPQH-HSVPPNSFAPPPGQH 83
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 355 NSPYA*PPAAGSTTFQFCVLSKYPPS 278
++ Y+ PPA STT+ + S YPPS
Sbjct: 23 STAYSPPPATSSTTYGSSIPSTYPPS 48
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 355 NSPYA*PPAAGSTTFQFCVLSKYPPS 278
++ Y+ PPA STT+ + S YPPS
Sbjct: 128 STAYSPPPATSSTTYGSSIPSTYPPS 153
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 458 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVR 342
+R P G V P+ +AP Q + L GA R P++
Sbjct: 599 KRVPIIGGFLVQPKEKAPVQQQSSLRRAGAIRRKPTPIK 637
>Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical
protein F47H4.1 protein.
Length = 250
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 357 TFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSP 461
TF S+ L EH ++G GA GD +P+ + +P
Sbjct: 89 TFASKRQLTEHTKCIQG-TGAPGDTIPIAKSINAP 122
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 464 ARRRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLP 348
+RR PP G G PP +P+ + AEG A+R P
Sbjct: 186 SRRPPPPPKGTGTPPPPPT-GEPQDLSAEGYASRRPPPP 223
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 464 ARRRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLP 348
+RR PP G G PP +P+ + EG A+R P
Sbjct: 30 SRRPPPPPKGTGTPP-PPPTGEPQDLSGEGNASRRPPPP 67
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 464 ARRRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLP 348
+RR PP G G PP +P+ + EG A+R P
Sbjct: 93 SRRPPPPPKGTGTPP-PPPTGEPQDLSGEGNASRRPPPP 130
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 923 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 965
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 957 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 999
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 1053 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 1095
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 923 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 965
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 957 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 999
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 1053 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 1095
>U80027-19|AAC48129.2| 313|Caenorhabditis elegans F-box a protein
protein 64 protein.
Length = 313
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 60 LDENTAEKVFINRAKRILIVSSDGHLAQWRCAPTFESAN 176
LD+ + E + ++ +I ++ HL QW+ A FE N
Sbjct: 172 LDDQSLEAIKLSNPSQINQLAQITHLNQWKTAKNFELCN 210
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 957 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 999
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 336 GYAYGELTFPSRTALREHVAGLRGGAGAWGDAVPVLRGGTSPR 464
G + G+ T + A+RE + GAG ++P+ G PR
Sbjct: 1053 GASQGQQTAAALAAIREQSGPIAPGAGQVAPSLPIHEGDVKPR 1095
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,818,467
Number of Sequences: 27780
Number of extensions: 298317
Number of successful extensions: 1058
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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