Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8p14
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   3.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   3.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.5  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = -1

Query: 486 CCNNSFGTHRYLIINYFGSTCSR*RLDYIIYNNSRCCNNSFGTHRYLIINYFGSTCSR*R 307
           C +N+   H  +   Y GS+       Y++    R  + +F  H++L++N+  ST     
Sbjct: 261 CNSNNIWLH--VDAAYAGSSFICPEFRYLMKGIDRADSFNFNPHKWLLVNFDCSTMWLKD 318

Query: 306 LNWII 292
            +W++
Sbjct: 319 PSWLV 323



 Score = 24.2 bits (50), Expect = 1.0
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -1

Query: 591 CCNNSFGTHRYLIINYFGSTCSR*RLNYIIYNNSRCCNNSFGTHRYLIINYFGST 427
           C +N+   H  +   Y GS+       Y++    R  + +F  H++L++N+  ST
Sbjct: 261 CNSNNIWLH--VDAAYAGSSFICPEFRYLMKGIDRADSFNFNPHKWLLVNFDCST 313



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -1

Query: 651 YFGSTCSR*RLNWIIYNHSRCCNNSFGTHRYLIINYFGST 532
           Y GS+       +++    R  + +F  H++L++N+  ST
Sbjct: 274 YAGSSFICPEFRYLMKGIDRADSFNFNPHKWLLVNFDCST 313


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 246 YLIINYFGSAYSSWRLNYIIYNNSRC 169
           YL+I       S+ R NY++ NNS C
Sbjct: 377 YLVIFIQFDQSSNSRNNYVLTNNSTC 402



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 561 YLIINYFGSTCSR*RLNYIIYNNSRC 484
           YL+I       S  R NY++ NNS C
Sbjct: 377 YLVIFIQFDQSSNSRNNYVLTNNSTC 402



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 456 YLIINYFGSTCSR*RLDYIIYNNSRC 379
           YL+I       S  R +Y++ NNS C
Sbjct: 377 YLVIFIQFDQSSNSRNNYVLTNNSTC 402


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 67  VDGKLINEEPKGTINDEVTPAVNEVSSGPST 159
           +D K+++     T++ +V PAV      P T
Sbjct: 163 IDSKVVDSRKNTTVSIDVFPAVARWMQDPKT 193


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 61  PTVDGKLINEEPKGTI 108
           P VDG+ + +EP  TI
Sbjct: 278 PVVDGEFLTDEPIATI 293


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 609 IYNHSRCCNN 580
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 504 IYNNSRCCNN 475
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 399 IYNNSRCCNN 370
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 294 IYNHSRCCNN 265
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 189 IYNNSRCCNN 160
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 288 NHSRCCNNSFGTYRYLIINYFGSA 217
           NH +  NN  GTY+    +  G A
Sbjct: 325 NHMQAMNNMAGTYQMTGYSAMGMA 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.304    0.122    0.311 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,343
Number of Sequences: 336
Number of extensions: 3067
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.5 bits)