Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8p13
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 44 1e-04
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 34 0.11
01_06_0498 + 29810105-29810401,29811448-29812726,29813969-298142... 33 0.26
06_01_0227 - 1733119-1734099 32 0.46
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 31 0.61
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 31 0.61
09_02_0006 + 2913672-2913770,2913870-2914157 30 1.9
03_06_0644 + 35253858-35254112,35254301-35254390,35254475-352545... 30 1.9
10_08_0357 - 17158414-17160150,17160534-17160710 29 2.5
06_02_0199 - 12940459-12940689,12940787-12940930 29 2.5
03_01_0441 + 3418622-3420988 29 2.5
01_04_0107 + 16086724-16086799,16088007-16088288,16088523-160885... 29 2.5
12_01_0736 + 6582371-6585370 29 3.3
12_01_0718 + 6339982-6342981 29 3.3
10_08_0359 - 17167829-17169595,17169976-17169996 29 3.3
06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397 29 3.3
11_02_0012 - 7346282-7347136,7347234-7347593 29 4.3
10_08_0354 - 17104223-17106061,17106770-17106794,17107317-171075... 29 4.3
05_04_0192 + 18936955-18937168,18937385-18937498,18937588-189376... 29 4.3
11_06_0204 + 21191611-21192807 28 5.7
10_03_0011 + 7034101-7034122,7035077-7035699 28 5.7
06_03_0028 + 15659824-15661266 28 5.7
01_01_0395 + 3030580-3031872 28 5.7
09_02_0433 + 9346464-9347304,9347848-9348470,9348578-9349282 28 7.5
08_02_1146 + 24678142-24678258,24678550-24678587,24678997-246790... 28 7.5
08_02_0195 - 14098865-14099083,14100209-14100352,14101820-141018... 28 7.5
06_03_0449 + 20907491-20910146,20910313-20910782 28 7.5
12_01_0740 + 6646471-6649407 27 9.9
12_01_0722 + 6355972-6359031 27 9.9
10_02_0174 - 6202334-6204922 27 9.9
01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267 27 9.9
01_01_0648 - 4917123-4917651,4917728-4917857,4917958-4918093 27 9.9
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 148 KFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEG-FKVVSVDASDKM 324
+ +GD RT+ Y+D L+G TVLD CGTGI S+ G +V++VD S KM
Sbjct: 268 EMLGDK-VRTEAYRDALLGNPSLMNGATVLDVGCGTGILSLFAAKAGASRVIAVDGSAKM 326
Query: 325 LKHA 336
+ A
Sbjct: 327 VSVA 330
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 33.9 bits (74), Expect = 0.11
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = +1
Query: 172 RTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEGFK-VVSVDASDKMLKHALKAR 348
RT Y+ ++ K K V+D CGTGI S+ G K V +V+AS+ A +AR
Sbjct: 67 RTDAYRSAIMHHQKFIEGKVVMDVGCGTGILSVFCARAGAKCVYAVEASEM----ATQAR 122
Query: 349 WEKRKNPKYDDWVIEEANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKL 528
+ N D V+ E D+E + + D +I + L + M
Sbjct: 123 EIVKANNLDDKVVVVHGRVE----DVEV---EDKVDVIISEWMGYMLLYES-----MLPS 170
Query: 529 CLSNFAKCLKPGGLLFIDH 585
L K LKPGGL+ H
Sbjct: 171 VLFARDKWLKPGGLILPSH 189
>01_06_0498 +
29810105-29810401,29811448-29812726,29813969-29814204,
29814327-29814968
Length = 817
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 238 DAACGTGIDSMMLVNEGFKVVSVDASDKMLKHAL 339
DA CGTG S+ + VV+ DAS+ ++HA+
Sbjct: 593 DAGCGTGQASISIAEHYDSVVATDASEGQIRHAV 626
>06_01_0227 - 1733119-1734099
Length = 326
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 229 TVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 336
TV DA CGTG ++ L ++G V++ D S M+ A
Sbjct: 152 TVCDAGCGTGSLAIPLASQGASVLASDISAAMVSEA 187
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 31.5 bits (68), Expect = 0.61
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Frame = +1
Query: 226 KTVLDAACGTGIDSMMLVNEG-FKVVSVDASDKMLKHALKARWEKRKNPKYDDWVIEEAN 402
+ VLD CGTG+ S+ G +V +VDASD AL+A R+N D ++
Sbjct: 83 EVVLDVGCGTGVLSIFCAFAGAARVYAVDASD----IALQAMEIVRENELSDKVIVLHGR 138
Query: 403 WETL------PQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPG 564
E QD+E + + D +I + L + M + K LKPG
Sbjct: 139 IEYYYIRIFENQDVEI---EEKVDVIISEWMGYMLLYES-----MLGSVIFARDKWLKPG 190
Query: 565 GLLFIDHRN-YDAMINTGATPGHSIYY 642
GL+ H + Y A I S+Y+
Sbjct: 191 GLILPSHASLYLAPITNSHRYQDSVYF 217
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 232 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 336
V+D CG GI S L G V +DA DK +K A
Sbjct: 73 VIDVGCGGGILSEPLARMGATVTGIDAVDKNIKIA 107
>09_02_0006 + 2913672-2913770,2913870-2914157
Length = 128
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 579 DKQEAAWLQAFREVAQTQLLHPLVSVLIQQMGERVPETYDGVE 451
DK+ A+L F + +T LH +S Q E +PE ++ ++
Sbjct: 34 DKRSTAFLSKFFPMGKTNALHGRISSFQQTRDETIPEAWEHLQ 76
>03_06_0644 +
35253858-35254112,35254301-35254390,35254475-35254596,
35254731-35254830,35254955-35255001,35255178-35255256,
35255722-35255769
Length = 246
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 160 DSNQRTQNYKDFL-IGLLKNNGCKTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 336
D QRT + + G L TVL CG G D + L G VV +D D ++ A
Sbjct: 53 DLGQRTPAVVELVHSGTLPAGDATTVLVPGCGAGYDVVALSGPGRFVVGLDICDTAIQKA 112
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 232 VLDAACGTGIDSMMLVNEGFKVVSVDASD 318
V+ + CG G+ + +L ++G+KVV V+ D
Sbjct: 139 VVGSGCGGGVAAAVLASKGYKVVVVEKGD 167
>06_02_0199 - 12940459-12940689,12940787-12940930
Length = 124
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 183 LQRLLDRS-LEEQRLQDCSGRRLWYW 257
L+R D + +E RL+D +GRR W+W
Sbjct: 65 LRRAADEAKVEVARLRDVAGRRFWWW 90
>03_01_0441 + 3418622-3420988
Length = 788
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 368 GFFLFSQRALRACFNILSEASTDTTLNPS---FTSIME 264
GFF+ QR LR+ +LSE+ ++T + TSI+E
Sbjct: 326 GFFIVEQRVLRSADGLLSESQVESTWETAIAKITSILE 363
>01_04_0107 +
16086724-16086799,16088007-16088288,16088523-16088585,
16088684-16089045
Length = 260
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 317 SEASTDTTLNPSFTSIMESIPVPQAASRTVLQPL 216
S A ++ T + S SI+ES+P PQ +QPL
Sbjct: 57 SMAESENTTSTSHVSIVESLPEPQEPKVEKIQPL 90
>12_01_0736 + 6582371-6585370
Length = 999
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -2
Query: 500 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 360
SSNK +NE P + + N+++ N+ S + LA I QSS+ F
Sbjct: 887 SSNKLSNEIPEKLASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 928
>12_01_0718 + 6339982-6342981
Length = 999
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -2
Query: 500 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 360
SSNK +NE P + + N+++ N+ S + LA I QSS+ F
Sbjct: 887 SSNKLSNEIPEKLASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 928
>10_08_0359 - 17167829-17169595,17169976-17169996
Length = 595
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 232 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLK 330
++ + CG G+ + +L + G+KVV V+ D K
Sbjct: 91 IVGSGCGGGVAAAVLASAGYKVVVVEKGDYFTK 123
>06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397
Length = 851
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = -1
Query: 405 PVGFFNYPIIIFGVLSLLPASFESVLQHLVRSINRHHFKPFIHQHHGVYPSTTSGVQNSL 226
P+ F+N+P L SF S L ++ +N + ++P I Q + + T +G+ L
Sbjct: 571 PILFYNFPRRYKAFLYCNSVSFMSSLSLIILLVNPNLYRPAI-QSYALSVCTVAGLFALL 629
Query: 225 AAVVLQETDQ-----EVFVVLRSLITISDELVPCF 136
A T VFV++ ++ I L+ CF
Sbjct: 630 GAYAAGSTQHLKTSIYVFVLVAVVLFIMIILLVCF 664
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 503 YSSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 360
Y KW+N FPR T +G+ + SV S + Y+GF+
Sbjct: 162 YFKGKWSNPFPRERT----TTGKFHRLDGSSVDAPFMSSREDQYIGFY 205
>10_08_0354 -
17104223-17106061,17106770-17106794,17107317-17107561,
17108432-17108677
Length = 784
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 232 VLDAACGTGIDSMMLVNEGFKVVSVDASD 318
V+ + CG G+ + +L + G+KVV V+ D
Sbjct: 265 VVGSGCGGGVAAAVLASAGYKVVVVEKGD 293
>05_04_0192 +
18936955-18937168,18937385-18937498,18937588-18937656,
18937807-18937826,18937932-18937984,18938082-18938139,
18938338-18938367,18938468-18938719
Length = 269
Score = 28.7 bits (61), Expect = 4.3
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +1
Query: 232 VLDAACGTGIDSMMLVNEGFK-VVSVDASDKMLKHALKARWEKRKNPKYDDWVIEEANWE 408
VL CG + S +V +G++ VV+VD S +++ + K+ D + + ++
Sbjct: 63 VLMLGCGNSLLSEDMVKDGYEEVVNVDISSVVIE---------QMREKHVD-IPQLTYFQ 112
Query: 409 TLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGLLFIDH 585
+D+ F D FD V+ G A + + K+ L+ A+ L+PGG+ + H
Sbjct: 113 MDVRDMSLF-GDGTFDCVLDKGTLDAMMCGDDAPLGASKM-LAEVARILRPGGIYMLVH 169
>11_06_0204 + 21191611-21192807
Length = 398
Score = 28.3 bits (60), Expect = 5.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 518 ILWSPYSSNKWANEFPRHMTASNW 447
++W P + +W +FP ++ NW
Sbjct: 137 VVWDPMTGRRWRLDFPGYLEDFNW 160
>10_03_0011 + 7034101-7034122,7035077-7035699
Length = 214
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 488 WANEFPRHMTASNWVSGRNVSMSCGSVSQLASSI 387
W+ E P + A W+ GR M+ QLA S+
Sbjct: 115 WSQESPSILRAGTWLYGRRRQMASSLCEQLAYSL 148
>06_03_0028 + 15659824-15661266
Length = 480
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 490 LLDEYGDQRMQKLCLSNFAKCLKPGGLLFID 582
+LD + D +M L ++ + L+PGGLL++D
Sbjct: 402 VLDGWVDLQMLDFVLFDWDRVLRPGGLLWVD 432
>01_01_0395 + 3030580-3031872
Length = 430
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 408 DTPARHRDVSTRYPVRRRHMSRELVRPFVG*VRRPKDAEAVSEQLREMPEARRPPVYRPQ 587
+ P RD R +R M+ E VR KDA ++E L PE + Q
Sbjct: 105 EPPCTSRDTHHREAIRFTAMALEKVREAASLAEAAKDAVDIAETLLPQPELKTEWALAAQ 164
Query: 588 EL 593
+L
Sbjct: 165 DL 166
>09_02_0433 + 9346464-9347304,9347848-9348470,9348578-9349282
Length = 722
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 421 DIETFLPDT-QFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGLLFIDHRNYD 597
D E L + + V G++ H + YG+ + C C K LLF ++N D
Sbjct: 88 DPEALLAEMLMLEGVAVDGDTVLHAVATYGENDDFQKCAQTM--CSKARQLLFKQNKNGD 145
Query: 598 AMINTGATPGHSIYYNC 648
++ A G S +C
Sbjct: 146 TPLHCAARAGKSQMVSC 162
>08_02_1146 +
24678142-24678258,24678550-24678587,24678997-24679012,
24679874-24680002,24680073-24680229,24680337-24680530,
24680668-24680916,24681196-24681309,24681949-24681990,
24682402-24682572,24682932-24683104,24683378-24683624,
24684046-24684130,24684401-24684510,24684714-24684977,
24685885-24685950,24686431-24686525,24686780-24686858
Length = 781
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 503 YSSNKWANEFPRHMTASNWVSGRNVS 426
Y SN WA+EF +H + G N++
Sbjct: 289 YGSNGWASEFEQHQSQMAMTGGMNMA 314
>08_02_0195 -
14098865-14099083,14100209-14100352,14101820-14101833,
14101919-14102006,14102303-14102426,14102959-14103068,
14103142-14103348,14103441-14103568,14103781-14103892,
14105678-14105695,14105917-14106109,14106274-14106359,
14106494-14106582,14106817-14106863,14107424-14107534,
14110252-14110318,14110419-14110509
Length = 615
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -2
Query: 449 WVSGRNVSMSCGSVSQLASSITQSSYLGFFLFSQRALRACFNILSEASTDTTLNPSFTSI 270
W SGRN S G+ + S + G + ++AL LS++ + T I
Sbjct: 464 WNSGRN---SGGNGHNRSISFVAAMIAGTIYWQRKALVQDLKALSDSCRSNSFIEHATGI 520
Query: 269 MESIPVPQAASRTV 228
ME VP+ S+ V
Sbjct: 521 MEEENVPERLSKGV 534
>06_03_0449 + 20907491-20910146,20910313-20910782
Length = 1041
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 145 NKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEGF 291
N+F GD ++ +++ +++NNG L A T I + + N F
Sbjct: 428 NRFTGDFPEKIWSFQKLTTVMIQNNGFTGALPAEISTNISRIEMGNNMF 476
>12_01_0740 + 6646471-6649407
Length = 978
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 500 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 360
SSNK + E P+ + + N+++ N+ S + LA I QSS+ F
Sbjct: 866 SSNKLSGEIPQELASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 907
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 500 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 360
SSNK + E P+ + + N+++ N+ S + LA I QSS+ F
Sbjct: 907 SSNKLSGEIPQELASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 948
>10_02_0174 - 6202334-6204922
Length = 862
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/76 (21%), Positives = 26/76 (34%)
Frame = -2
Query: 587 LWSINRRPPGFRHFAKLLRHSFCILWSPYSSNKWANEFPRHMTASNWVSGRNVSMSCGSV 408
LWS +R ++ + C LW PY N P + +
Sbjct: 298 LWSRRKRTTTSEEAQQVFQDEACFLWRPYQYNSLNWTQPEWFNEKTTTASSESKHKPKWL 357
Query: 407 SQLASSITQSSYLGFF 360
++ ITQ+ G+F
Sbjct: 358 DDYSAMITQAVLTGWF 373
>01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267
Length = 769
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 103 VKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVN 282
VK+++ D K + + + D ++G+ K N CK DA + S + +
Sbjct: 268 VKEKHGDPKGTEVIEVCRKSVKRVKFSEVDDVLGINKQNICKLFSDALASSSSSSTDMSS 327
Query: 283 EGFKVVSVDA-SDKMLKHALKARWEKRKNPKYDD 381
EG K ++ ++ S M + A K E K+ ++D
Sbjct: 328 EGDKHIAAESCSSHMPETATK---EASKSTDHED 358
>01_01_0648 - 4917123-4917651,4917728-4917857,4917958-4918093
Length = 264
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -2
Query: 512 WSPYSSNKWANEFPRHMTASNWVSGRNVS--MSCGSVSQL 399
WSP + + RH TA NW+S N + CG +L
Sbjct: 17 WSPEEDDALRDYINRHGTAGNWISLPNKAGLRRCGKSCRL 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,265,644
Number of Sequences: 37544
Number of extensions: 459287
Number of successful extensions: 1404
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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