Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8o22
         (224 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   0.078
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   0.61 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   2.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   3.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    20   4.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    20   4.3  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    20   4.3  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    20   4.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   4.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   4.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   5.7  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           19   7.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           19   7.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   7.5  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    19   7.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          19   9.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       19   9.9  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 0.61
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 127 RLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRR 8
           R PHPRL+R    L   P   +P      R   PP+P  R
Sbjct: 81  RPPHPRLRRE-AELEAEPGNNRPVYISQPR---PPHPRLR 116



 Score = 22.6 bits (46), Expect(2) = 0.078
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 127 RLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRR 8
           R PHPRL+R    L   P   +P      R   PP+P  R
Sbjct: 137 RPPHPRLRRE-AELEAEPGNNRPVYISQPR---PPHPRLR 172



 Score = 21.4 bits (43), Expect(2) = 0.078
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 142 WLSTLRLPHPRLQR 101
           ++S  R PHPRL+R
Sbjct: 104 YISQPRPPHPRLRR 117



 Score = 21.4 bits (43), Expect = 1.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 142 WLSTLRLPHPRLQR 101
           ++S  R PHPRL+R
Sbjct: 160 YISQPRPPHPRLRR 173



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 53  RPPHPRLRR 61



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 193 RPPHPRLRR 201



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 221 RPPHPRLRR 229



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 249 RPPHPRLRR 257


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 0.61
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 127 RLPHPRLQRSP 95
           R PHPRL+R P
Sbjct: 110 RPPHPRLRREP 120



 Score = 22.6 bits (46), Expect = 0.61
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 127 RLPHPRLQRSP 95
           R PHPRL+R P
Sbjct: 136 RPPHPRLRREP 146



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 54  RPPHPRLRR 62



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 82  RPPHPRLRR 90


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 150 IFYGALAPFYIPV 188
           + Y AL  FYIP+
Sbjct: 248 VVYSALGSFYIPM 260


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
          protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 3.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 63 SQVLTGFGELSLLHT 19
          S+ LT  G+LS +HT
Sbjct: 34 SRTLTSLGDLSDVHT 48


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 71  RRITKKSAWTPLKARVREPKSTKPMK 148
           R +TK    +  K+ VR+  +TKP K
Sbjct: 227 RAVTKLPDTSMAKSFVRKVHATKPPK 252


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 54  RPPHPRLRR 62



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 82  RPPHPRLRR 90



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 110 RPPHPRLRR 118


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
          protein.
          Length = 85

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +1

Query: 1  DWYVGEG 21
          DWY+G+G
Sbjct: 77 DWYMGQG 83


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 25  RPPHPRLRR 33



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 53  RPPHPRLRR 61



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 81  RPPHPRLRR 89



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 109 RPPHPRLRR 117



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 137 RPPHPRLRR 145



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 127 RLPHPRLQR 101
           R PHPRL+R
Sbjct: 165 RPPHPRLRR 173


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 76   PSRGQPGPHGLRRTLPP 26
            P RG+     LR  LPP
Sbjct: 1839 PRRGRSSRSSLRTLLPP 1855


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 76   PSRGQPGPHGLRRTLPP 26
            P RG+     LR  LPP
Sbjct: 1835 PRRGRSSRSSLRTLLPP 1851


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
 Frame = -2

Query: 103 RSPCRLLRNPSRGQ----PGPHGLRRTLPPP 23
           R PCR +   +  +    P   G RRT PPP
Sbjct: 388 RLPCREVEAAATARNVVAPFLIGSRRTSPPP 418


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 64  QPGPHGLRRTLPPPYPH 14
           Q G H +  T+ PP+ H
Sbjct: 337 QHGNHTMGPTMGPPHHH 353


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 109 LQRSPCRLLRNPSRGQPGPHG 47
           L+ SP    +NP  G  G HG
Sbjct: 80  LEPSPPFCEKNPKLGILGTHG 100



 Score = 18.6 bits (36), Expect = 9.9
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -2

Query: 79  NPSRGQPGPHGLRRTLPPP 23
           NP    PGP  L    P P
Sbjct: 66  NPEHKPPGPKDLVYLEPSP 84


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 109 LQRSPCRLLRNPSRGQPGPHG 47
           L+ SP    +NP  G  G HG
Sbjct: 81  LEPSPPFCEKNPKLGILGTHG 101



 Score = 18.6 bits (36), Expect = 9.9
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -2

Query: 79  NPSRGQPGPHGLRRTLPPP 23
           NP    PGP  L    P P
Sbjct: 67  NPEHKPPGPKDLVYLEPSP 85


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 82  RNPSRGQPGPHGLRRT 35
           RNP  G  GP    R+
Sbjct: 56  RNPGPGSKGPRDFPRS 71


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 112 RLQRSPCRLLRNPSR 68
           +L ++PC LL  P R
Sbjct: 73  QLFQTPCELLNFPKR 87


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 40  RTLPPPYPH 14
           R LPP +PH
Sbjct: 99  RKLPPLHPH 107


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 82 RNPSRGQPGP 53
          + PS G PGP
Sbjct: 14 QQPSSGAPGP 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,942
Number of Sequences: 438
Number of extensions: 1130
Number of successful extensions: 37
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)