Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8o07
(587 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 155 2e-38
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 149 1e-36
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 144 6e-35
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 111 4e-25
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 104 5e-23
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 31 0.90
05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009 29 2.7
03_01_0406 + 3143701-3143801,3143910-3144063,3145032-3145164,314... 29 2.7
04_04_1031 - 30254665-30255794,30256181-30257036 29 3.6
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 28 4.8
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 28 4.8
09_04_0088 + 14494711-14494931,14496309-14496399,14496496-144965... 28 6.3
05_01_0192 + 1394342-1396645 28 6.3
03_04_0169 - 17959262-17959304,17959441-17959532,17959682-179597... 28 6.3
02_05_1113 + 34207997-34208380 28 6.3
01_05_0333 + 21064693-21066006 27 8.4
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 155 bits (376), Expect = 2e-38
Identities = 79/161 (49%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Frame = +3
Query: 84 AGIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTE-ESSSLTHDAHFWLGSKTTQDKK 260
+G+E+W IENF+PVP +GKFY GDSYI+LKTT ++ S HD H+WLG T+QD+
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 261 GSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGFNEVQTNAGA 440
G+AAI T+ LD LGGRAV +REVQG E+ LSYF+P I GG SGFN V+ N
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQD 156
Query: 441 E-KRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIF 560
RL G + ++EV SSL FIL+ + IF
Sbjct: 157 HVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIF 197
Score = 50.8 bits (116), Expect = 8e-07
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 10/167 (5%)
Frame = +3
Query: 90 IEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESSSLTHDAHFWLGSKTTQDKKGSA 269
+++W + K Y GD YI T W G K+ ++ + SA
Sbjct: 409 LQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECLIGTWFGKKSVEEDRTSA 468
Query: 270 AIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGF----------NE 419
+ +A R +G E F F+ +++ +GG SG+ ++
Sbjct: 469 ISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQ-SLQVFKGGLSSGYKNFIAVNGTDDD 527
Query: 420 VQTNAGAEKRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIF 560
G ++ SG +NM+ +V A +SSL ++C+IL N + +F
Sbjct: 528 TYVEGGLALFRIQGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVF 574
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 149 bits (362), Expect = 1e-36
Identities = 75/161 (46%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Frame = +3
Query: 84 AGIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTE-ESSSLTHDAHFWLGSKTTQDKK 260
+G+EIW IE + VP + +G+F+ GDSY++LKTT ++ S HD H+WLG T+QD+
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 261 GSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGFNEVQTNAGA 440
G+AAI T+ LD LGGRAV +REVQG+E+ FLSYFKP I EGG SGF + N
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINERE 195
Query: 441 E-KRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIF 560
RL G + ++EV SSL + FIL+ + IF
Sbjct: 196 HVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIF 236
Score = 56.8 bits (131), Expect = 1e-08
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Frame = +3
Query: 57 PVFEEAGNQ----AGIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESSSLTHDAH 224
PV EE Q +++W + E KFY+GD YI +
Sbjct: 438 PVKEEPQPQIDCTGNLQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGEECLIG 497
Query: 225 FWLGSKTTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNE 404
W G K+ QD+K +A + + L +AV R +G E + F S F+ + + +GG
Sbjct: 498 TWFGKKSVQDEKTTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQNLVIF-KGGVS 556
Query: 405 SGFNEVQTNAGAEK--------RLLKL--SGCDNMRIEEVAAEASSLTKNHCFILENEHD 554
+G+ + + G E L ++ SG +NM+ +V A+SL ++C++L +
Sbjct: 557 TGYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVLHDGDT 616
Query: 555 IF 560
+F
Sbjct: 617 LF 618
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 144 bits (348), Expect = 6e-35
Identities = 65/114 (57%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Frame = +3
Query: 87 GIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTE-ESSSLTHDAHFWLGSKTTQDKKG 263
G+EIW IENF+PVP YGKF+ GDSYI+LKTT ++ SL HD H+W+G T+QD+ G
Sbjct: 51 GLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESG 110
Query: 264 SAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGFNEVQ 425
+AAI T+ LD LGGRAV +RE+QG+E+ FLSYF+P I GG SGF V+
Sbjct: 111 TAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHVE 164
Score = 48.4 bits (110), Expect = 4e-06
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Frame = +3
Query: 90 IEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESSSLTHDAHFWLGSKTTQDKKGSA 269
+++W I + + + KFY GD YI W G K+ ++ + +A
Sbjct: 405 LQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECLIGSWFGKKSIEEDRVTA 464
Query: 270 AIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGFNEVQTNAGAEK- 446
+ + +AV R +G E F F+ + + +GG SG+ + G +
Sbjct: 465 ISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQ-SFQVFKGGLSSGYKKFIAENGIDDD 523
Query: 447 -------RLLKL--SGCDNMRIEEVAAEASSLTKNHCFILENEHDIF 560
L ++ SG +NM+ +V A ASSL ++ +IL + + +F
Sbjct: 524 TYLEDGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYILHDGNTVF 570
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 111 bits (267), Expect = 4e-25
Identities = 58/115 (50%), Positives = 74/115 (64%)
Frame = +3
Query: 216 DAHFWLGSKTTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEG 395
D HFW+G ++QD+ G+AAI T+ LD MLGGRAV HRE+QG+ES FLSYFKP I LEG
Sbjct: 68 DIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLEG 127
Query: 396 GNESGFNEVQTNAGAEKRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIF 560
G SGF + + E RL G +R++EV SSL + FIL+ E I+
Sbjct: 128 GFASGFKTPEEDK-FETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIY 181
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
Frame = +3
Query: 90 IEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESSSLTH-DAHFWLGSKTTQDKKGS 266
+E++ + + GKFY+GD YIVL T +W+G + + +
Sbjct: 400 LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEM 459
Query: 267 AAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGFNEVQTNAGAEK 446
A ++ + L GR + R QG E F++ F+P + L+GG SG+ + G +
Sbjct: 460 AFQTANSIWNSLKGRPILGRIYQGKEPPQFIALFQPMV-ILKGGISSGYQKFVEEKGLKD 518
Query: 447 RLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHD 554
G RI +S+ N ++ HD
Sbjct: 519 ETYSGDGIALFRI-----SGTSIHNNKVLQVDARHD 549
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 104 bits (250), Expect = 5e-23
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Frame = +3
Query: 42 VKMENPVFEEAGNQAGIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESSSLT-HD 218
+K + F G++ G++IW I + + +GKFY G++YI+L T E S + H+
Sbjct: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
Query: 219 AHFWLGSKTTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGG 398
H+W+G + ++ +A+ I LD LG V +RE QG ES FLSYFKP I ++ G
Sbjct: 61 VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQ-G 119
Query: 399 NESGFNEVQTNAGAEKRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIFV 563
+ S + + + + + G R+ EV SSL F+++ E IF+
Sbjct: 120 SLSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFL 174
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/108 (24%), Positives = 47/108 (43%)
Frame = +3
Query: 90 IEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESSSLTHDAHFWLGSKTTQDKKGSA 269
+++W ++N + + YNGD YI+ + E H W G + + + +A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHLFFAWSGLNSINEDRVAA 461
Query: 270 AIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGF 413
A + D + G AV + +G E +F FK I + +GG +
Sbjct: 462 ASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKSLIIF-KGGRSMAY 508
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 444 KRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIFVLMPEGAKA 587
K L +L C+++ I VA + ++HC+ L+ FV +PE KA
Sbjct: 409 KLLCELKLCEDVAINTVANTLALAEQHHCYQLKTVCLRFVALPENLKA 456
>05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009
Length = 111
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 55 IRCLRRQETRPA*RSGLLRTSSRFPLIPSTMG 150
IRC+ + TRP SG++R R L P++MG
Sbjct: 68 IRCIWGKVTRPHGNSGVVRAKFRSNLPPTSMG 99
>03_01_0406 +
3143701-3143801,3143910-3144063,3145032-3145164,
3145336-3145358
Length = 136
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +3
Query: 213 HDAHFW-LGSKTTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYL 389
H W G T D K + IW T D L VH + +E + F F + L
Sbjct: 25 HPIEIWEAGRYETSDAKSFSGIWVATGKDGLMMATVHSTQFMKNEYTFFAGGFLWPVAAL 84
Query: 390 EG 395
+G
Sbjct: 85 QG 86
>04_04_1031 - 30254665-30255794,30256181-30257036
Length = 661
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +3
Query: 306 GRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGFNEVQTNAGAEKRLLKLSGCDNMRI 485
GR R + H S LF I + E+G V+T A R L+ G + R+
Sbjct: 555 GRTDDVRNLACHFSMLFYQNQLLEIVDSQVAEEAGTKHVKTVAQLALRCLRSRGEERPRM 614
Query: 486 EEVAAEASS---LTKNHCFILENEHD 554
EVA E + L K H +L+ E D
Sbjct: 615 IEVAIELEALRRLMKQH-LVLQTEED 639
>05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = -1
Query: 560 EDVVLVLQDEAVVLCQRRGLGCDLLDPHVVASGQLQETFLSTSVG 426
+D++LVL D++ +L +G C P +VAS L + +TSVG
Sbjct: 1355 KDILLVLVDKSKLL-NLKGKQCRFQHPPLVASQNLPCSLEATSVG 1398
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 466 PDSFRRRFSAPALVCTSLKPDSFPPSR 386
PD+ F+A L+ ++ KPD+ PP R
Sbjct: 10 PDTLSDAFAAAVLMSSTDKPDTLPPGR 36
>09_04_0088 +
14494711-14494931,14496309-14496399,14496496-14496571,
14496671-14496755,14497381-14497450,14499111-14499316,
14499434-14499508,14501043-14501133,14501400-14501441,
14501661-14501741,14502010-14502089,14502254-14502365
Length = 409
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 369 KPAIRYLEGGNESGFNEV---QTNAGAEKRLLKLS--GCDNMRIEEVAAEASSLTKNHCF 533
K IR + GN SG N+V Q G + ++ KLS CD ++ E++ ++ C
Sbjct: 303 KSKIRSTKIGNHSGINKVQRLQLALGEQTKMAKLSQQQCDKLKNEQILCRI-CFERDICI 361
Query: 534 IL 539
+L
Sbjct: 362 VL 363
>05_01_0192 + 1394342-1396645
Length = 767
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 117 EPVPFDPKYYGKFYNGDSYIVLKTTEESSSLTHDAHFWLGSKTT 248
EPV P G++ GD+++ + + S+ H +W S T
Sbjct: 205 EPVLSAPLDLGEYVKGDAFVGFSASTQGSTEMHAVEWWTFSTPT 248
>03_04_0169 -
17959262-17959304,17959441-17959532,17959682-17959759,
17959938-17960075,17960174-17960302,17960556-17960685,
17960797-17960974,17961177-17961315,17961399-17961488,
17961633-17961794,17961966-17962130,17962250-17962387,
17962827-17963006,17963405-17963533,17963878-17964113,
17964233-17964395,17965260-17965628,17965724-17965828
Length = 887
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 143 LWEILQRRLLHRVEDHGGVILADPRRPLL 229
LW+ + L VE + G +L DPRRPLL
Sbjct: 77 LWDEILAALTW-VEGNMGAVLGDPRRPLL 104
>02_05_1113 + 34207997-34208380
Length = 127
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 339 HESSLFLSYFKPAIRYLEGGNESGFNEVQTN 431
H SS FLS+ P + Y + G++ + Q++
Sbjct: 5 HSSSFFLSFLLPCLSYPDAGDDDNLGKRQSD 35
>01_05_0333 + 21064693-21066006
Length = 437
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 557 DVVLVLQDEAVVLCQRRGLGCDLLDPH 477
DV +L A VLC GCD LD H
Sbjct: 130 DVPYLLYYNAAVLCAAAAAGCDHLDCH 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,613,584
Number of Sequences: 37544
Number of extensions: 410465
Number of successful extensions: 1365
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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