Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8o07
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 129 1e-30
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 97 8e-21
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 97 8e-21
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 33 0.15
AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical ... 31 0.61
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 1.9
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 1.9
U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 28 4.3
Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative transp... 28 5.7
U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative transp... 28 5.7
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 27 7.5
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 27 7.5
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 129 bits (312), Expect = 1e-30
Identities = 70/174 (40%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Frame = +3
Query: 54 NPVFEEAGNQAGIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESSSLTHDAHFWL 233
+P E G + G+ +W I F P +G FY GD+YI L + D HFWL
Sbjct: 7 DPALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDGC---WDVHFWL 63
Query: 234 GSKTTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNESGF 413
G + D+ G AAI T+ +DD LGG HRE+Q +ES LFLSYF IRY+ GG ESG+
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 414 NEVQTN-AGAEKRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIFVLMP 572
V + L G N+R EV E +SL FIL+ D++V MP
Sbjct: 124 RHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMP 177
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 97.1 bits (231), Expect = 8e-21
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Frame = +3
Query: 66 EEAGNQAGIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESS-SLTHDAHFWLGSK 242
E+ G+ G+ +W IENF P D ++G+FY+ D+Y+VLKTT E+S L H +WLG
Sbjct: 502 EDVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEH 561
Query: 243 TTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNE-SGFNE 419
+ DK +A+ + L + L RE E+ FL+ F I Y+EGG SGF
Sbjct: 562 ASLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGFYT 621
Query: 420 VQTNAGAEKRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIFV 563
+ A + + +E V SL CF+L+ I++
Sbjct: 622 TEKPAHLTRLYRAGVNGTAVEMEPVPLSVESLDPRFCFLLDAGETIWI 669
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 97.1 bits (231), Expect = 8e-21
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Frame = +3
Query: 66 EEAGNQAGIEIWTIENFEPVPFDPKYYGKFYNGDSYIVLKTTEESS-SLTHDAHFWLGSK 242
E+ G+ G+ +W IENF P D ++G+FY+ D+Y+VLKTT E+S L H +WLG
Sbjct: 502 EDVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEH 561
Query: 243 TTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESSLFLSYFKPAIRYLEGGNE-SGFNE 419
+ DK +A+ + L + L RE E+ FL+ F I Y+EGG SGF
Sbjct: 562 ASLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGFYT 621
Query: 420 VQTNAGAEKRLLKLSGCDNMRIEEVAAEASSLTKNHCFILENEHDIFV 563
+ A + + +E V SL CF+L+ I++
Sbjct: 622 TEKPAHLTRLYRAGVNGTAVEMEPVPLSVESLDPRFCFLLDAGETIWI 669
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 33.1 bits (72), Expect = 0.15
Identities = 27/97 (27%), Positives = 43/97 (44%)
Frame = -2
Query: 508 EASAATSSILMLSHPDSFRRRFSAPALVCTSLKPDSFPPSRYLMAGLK*LRNKLDSCPWT 329
E S+A S + + RRR SAP P+ PP + G K +R K + CP+
Sbjct: 243 EESSAHSLLHSAQNSVKIRRRKSAPF-------PEKPPPKKASHTGKKPVREKKNVCPYC 295
Query: 328 SR*CTALPPSMSSNVIVHMAAEPFLS*VVLLPSQKWA 218
++ P ++ + VH+ A+ S +P K A
Sbjct: 296 NK-AFVRPAELARHSFVHLRAKHLQSSSTEIPKWKCA 331
>AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical
protein F18A11.5 protein.
Length = 373
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 132 DPKYYGKFYN----GDSYIVLKTTEESSSLTHDAHFW 230
DPK++GK N GD ++ TE L +AHF+
Sbjct: 65 DPKHFGKVLNYLRDGDHFVAPSDTEACDELKREAHFY 101
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical protein
F33A8.1 protein.
Length = 897
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = +2
Query: 215 RRPLLAGQQDHSGQKGLRCHMDDHVRRHAGRQSCASPRGPGTRVQFVSELFQASHQIPRR 394
RRP + + R DD R+ R+ + R G R + Q H+ RR
Sbjct: 791 RRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRR 850
Query: 395 RERVWLQRSADQRWC*ETSPEAVRMRQHEDRGGRSRGLVSD 517
+ D+R R + E+RGGR R + SD
Sbjct: 851 DRSKDREDRRDRRRHDSDDDRKTRRDRSEERGGRRREVESD 891
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin protein.
Length = 897
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = +2
Query: 215 RRPLLAGQQDHSGQKGLRCHMDDHVRRHAGRQSCASPRGPGTRVQFVSELFQASHQIPRR 394
RRP + + R DD R+ R+ + R G R + Q H+ RR
Sbjct: 791 RRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRR 850
Query: 395 RERVWLQRSADQRWC*ETSPEAVRMRQHEDRGGRSRGLVSD 517
+ D+R R + E+RGGR R + SD
Sbjct: 851 DRSKDREDRRDRRRHDSDDDRKTRRDRSEERGGRRREVESD 891
>U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical
protein F13D11.3 protein.
Length = 186
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 363 YFKPAIRYLEGGNESGFNEVQTNAGAEKRLLKLSGCDNMRIEEVAAEASSLTKN 524
YF+P ++Y+E + G N V A R L+ M E ++ E + L N
Sbjct: 71 YFEPVVKYIEDAKQQGHNTVIYCAAGVSRSATLTIVYLMVTENLSLEEAYLQVN 124
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 366 FKPAIRYLEGGNESGFNEVQTNA-GAEKRLLKLSGCDNMRIEEVAAEASSLTKN 524
F P YL G++ GF EV G ++ LK DN+ + + A S +++
Sbjct: 222 FSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRD 275
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 366 FKPAIRYLEGGNESGFNEVQTNA-GAEKRLLKLSGCDNMRIEEVAAEASSLTKN 524
F P YL G++ GF EV G ++ LK DN+ + + A S +++
Sbjct: 222 FSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRD 275
>Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 401 VPAFEVSDGWLEIAQKQTGLVS 336
+ F+ SDGWL+ +K GLVS
Sbjct: 191 IEGFQASDGWLKKWKKTNGLVS 212
>U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 401 VPAFEVSDGWLEIAQKQTGLVS 336
+ F+ SDGWL+ +K GLVS
Sbjct: 191 IEGFQASDGWLKKWKKTNGLVS 212
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 27.5 bits (58), Expect = 7.5
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +2
Query: 380 QIPRRRERVWLQRSADQRWC 439
++ ++ + W+Q+SAD WC
Sbjct: 466 EVMEKQSKQWIQKSADGEWC 485
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 339 HESSLFLSYFKPAIRYLEGGNESGFNEVQT 428
H+S +F Y +R ++ G E+ +NE+ T
Sbjct: 436 HDSIMFFEYTAVELRLIDQGPENSYNELAT 465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,725,686
Number of Sequences: 27780
Number of extensions: 296734
Number of successful extensions: 890
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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