Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8o06
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical ... 34 0.075
AF022972-3|AAC48235.2| 526|Caenorhabditis elegans Udp-glucurono... 33 0.13
AF022972-10|AAC48233.2| 523|Caenorhabditis elegans Udp-glucuron... 32 0.30
AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 31 0.53
AF022972-4|AAC48236.2| 528|Caenorhabditis elegans Udp-glucurono... 31 0.53
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 31 0.92
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 31 0.92
Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical pr... 30 1.2
U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 30 1.6
Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z71185-2|CAA94904.2| 522|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 29 2.1
U88311-3|AAB42345.1| 526|Caenorhabditis elegans Udp-glucuronosy... 29 2.1
AF022972-5|AAC48237.1| 523|Caenorhabditis elegans Udp-glucurono... 29 2.1
Z82260-2|CAB05130.1| 344|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical pr... 29 2.8
U28943-11|AAK68295.1| 319|Caenorhabditis elegans Hypothetical p... 29 2.8
U97003-1|AAB52270.2| 527|Caenorhabditis elegans Udp-glucuronosy... 29 3.7
U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosy... 29 3.7
AF016440-8|ABD94107.1| 286|Caenorhabditis elegans Dehydrogenase... 28 4.9
AF016440-7|AAB65901.2| 317|Caenorhabditis elegans Dehydrogenase... 28 4.9
Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical p... 28 6.5
Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 27 8.6
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 27 8.6
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 27 8.6
AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical
protein F10D2.8 protein.
Length = 124
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 242 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 364
S +Y+ L P+ SH I DAL AGH VT+ TP
Sbjct: 13 STYSYNFLVFCPLFGHSHTKFFATIADALTDAGHNVTFFTP 53
>AF022972-3|AAC48235.2| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein40 protein.
Length = 526
Score = 33.5 bits (73), Expect = 0.13
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Frame = +2
Query: 239 TSARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP--------FPPKESTKGL 394
+S +Y++L P+ SH++ + D L AGH VT +P + + TK +
Sbjct: 15 SSTTSYNILVFCPLFGHSHSTFFGRLADILTEAGHNVTLFSPTIIDEFRNYSYTKLTKDV 74
Query: 395 KIIDVS-ATASVSEMIDMN----DQRNADAGIALIRTFAANITRLSLSVPALQQAIVSG- 556
+D S ++ ++I N +Q + I F +ITR +V A A++ G
Sbjct: 75 AYLDPSPELKAIGDLIAGNKRWWNQEFSVFEIPQTTRFFKSITREQNNVLANNLALLDGL 134
Query: 557 ---KYDAVVTESFFNDA 598
K+D ++ ES F A
Sbjct: 135 KQKKFDLILFESVFTCA 151
>AF022972-10|AAC48233.2| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein39, isoform a
protein.
Length = 523
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLKIIDVSATASVS 430
+++ L P+ + SH+ I D+L AGH VT+ TP T K +VS T S
Sbjct: 16 SFNFLVFCPLFAHSHSKFFATIADSLTDAGHNVTFFTP------TIVEKYRNVSYTKSTK 69
Query: 431 EMIDMNDQR 457
+++ M +
Sbjct: 70 DVVHMKPSK 78
>AF026215-2|AAB71324.2| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein36 protein.
Length = 533
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 364
+Y+ L P+ SH + I D L AGH VT+ TP
Sbjct: 22 SYNFLVFCPLFGHSHTTFFAKIADTLTYAGHNVTFFTP 59
>AF022972-4|AAC48236.2| 528|Caenorhabditis elegans
Udp-glucuronosyltransferase protein37 protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 364
+Y+ L P+ SH + I D L AGH VT+ TP
Sbjct: 16 SYNFLIFSPLFGHSHTTFFAKIADTLSEAGHNVTFFTP 53
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKE 379
+Y+ L P+ + SH+ I D L AGH VT+ P +E
Sbjct: 22 SYNYLVFCPLFAHSHHKFLAKIADTLTEAGHNVTFLMPIIHRE 64
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKE 379
+Y+ L P+ + SH+ I D L AGH VT+ P +E
Sbjct: 22 SYNYLVFCPLFAHSHHKFLAKIADTLTEAGHNVTFLMPIIHRE 64
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 245 ARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 364
+ +Y VL P SH N LGK I D L+ AGH+VT P
Sbjct: 18 SNSYKVLVFNPAFGASHSNFLGK-ISDILIDAGHDVTMLIP 57
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 245 ARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 364
+ +Y VL P SH N LGK I D L+ AGH+VT P
Sbjct: 18 SNSYKVLVFNPAFGASHSNFLGK-ISDILIDAGHDVTMLIP 57
>Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical
protein ZC443.5 protein.
Length = 533
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 242 SARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 364
S Y VL P SH N LGK I D L+ AGH VT P
Sbjct: 14 STLTYKVLVFNPAYGASHSNFLGK-ISDILIDAGHNVTMLIP 54
>Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical
protein C44H9.1 protein.
Length = 534
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 364
+Y VL P SH N LGK I D L+ AGH+VT P
Sbjct: 17 SYKVLVFNPAFGASHSNFLGK-ISDILIDAGHDVTMLIP 54
>U88311-5|AAB42343.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein25 protein.
Length = 531
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 242 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKG 391
+ A+++L P SH + + D L AGH VT+ P E+ KG
Sbjct: 14 NVNAFNILVYSPSFGGSHTNFMARLADTLTEAGHNVTFVVPV-ADEARKG 62
>Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical
protein ZC455.6a protein.
Length = 534
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPF 367
+Y+ L + P+ SH I + L AGH+VT+ PF
Sbjct: 20 SYNFLVISPVYGFSHMKSMAIIANQLADAGHQVTYFQPF 58
>Z71185-2|CAA94904.2| 522|Caenorhabditis elegans Hypothetical
protein C35A5.2 protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 254 YHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 364
Y V C P+ + SH+ I D L AGH VT+ P
Sbjct: 21 YLVFC--PLYAHSHHKFLAKIADTLTDAGHNVTFLAP 55
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 VLCVFPIPSRSHNSLGKGIVDALLGAGHEVT-WATPFPPKESTKGLK 397
+L P SRSH I DAL+ AGH+V + T + P G K
Sbjct: 19 ILVYSPSISRSHLISNGRIADALVDAGHDVVMFITEYEPLTEFTGTK 65
>U88311-3|AAB42345.1| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein27 protein.
Length = 526
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 257 HVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLKI 400
+VL P + SH + + D L AGH VT+ P TK L +
Sbjct: 20 NVLVYSPAFAASHTNFMARLADTLTEAGHNVTFLVPIVDVARTKQLGV 67
>AF022972-5|AAC48237.1| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein38 protein.
Length = 523
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 364
+++ L P+ + SH+ I D+L AGH V + TP
Sbjct: 16 SFNFLVFCPLFAHSHSKFFATIADSLTDAGHNVAFFTP 53
>Z82260-2|CAB05130.1| 344|Caenorhabditis elegans Hypothetical
protein C32H11.3 protein.
Length = 344
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 326 LLGAGHEVTWATPFPPKESTKGLKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANI 505
L+ + HE FPP + T L +V+A A E N + DAGI + + NI
Sbjct: 94 LITSSHETMQPYFFPPSKFTLSLSNDEVAAFAFKIEWSPFNIPTSYDAGIGM-QPHVLNI 152
Query: 506 TR 511
T+
Sbjct: 153 TK 154
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVT 352
AY +L P S+SH I D L AGH VT
Sbjct: 21 AYKILVFSPATSKSHLISNGRIADELAKAGHNVT 54
>U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical
protein E02C12.8a protein.
Length = 350
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 383 TKGLKIIDVSATASVSEMIDMNDQRNADAGIALIR---TFAANITRLSLSVPALQQAIVS 553
TKG IID + ++M +AD I +IR TF+A RLS Q ++
Sbjct: 135 TKGYMIIDFVPNI---QTVEMYKSISADTIIPIIRGVATFSALGERLSKED---QHFVMG 188
Query: 554 GKYDAVVTESFFNDAE 601
Y ++ E FFND E
Sbjct: 189 PTYLEMIFEDFFNDVE 204
>U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical
protein E02C12.8c protein.
Length = 405
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 383 TKGLKIIDVSATASVSEMIDMNDQRNADAGIALIR---TFAANITRLSLSVPALQQAIVS 553
TKG IID + ++M +AD I +IR TF+A RLS Q ++
Sbjct: 135 TKGYMIIDFVPNI---QTVEMYKSISADTIIPIIRGVATFSALGERLSKED---QHFVMG 188
Query: 554 GKYDAVVTESFFNDAE 601
Y ++ E FFND E
Sbjct: 189 PTYLEMIFEDFFNDVE 204
>U28943-11|AAK68295.1| 319|Caenorhabditis elegans Hypothetical
protein E04F6.15 protein.
Length = 319
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -2
Query: 613 PVARLGIVEEGLRD-DRVVFPADDRLLQRWYREGQPRDIGSEGPDQRDTSISVSLVVHVN 437
P A++ IV+ L V AD+ L Q+W G + G GP ++ TS +N
Sbjct: 77 PNAQIDIVQCDLNSLSSVKKAADEYLEQKWPLHGLILNAGVFGPSEKTTSDGFEAHFGIN 136
Query: 436 HFTY 425
H +
Sbjct: 137 HLAH 140
>U97003-1|AAB52270.2| 527|Caenorhabditis elegans
Udp-glucuronosyltransferase protein32 protein.
Length = 527
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 260 VLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 364
VL P + SH + + D L AGH VT+ TP
Sbjct: 22 VLVYSPAYAASHTNFMARLADTLTEAGHNVTFFTP 56
>U40959-5|AAA81769.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein46 protein.
Length = 531
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 242 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVT 352
+A +Y +L P S+SH + D L AGH+VT
Sbjct: 14 AAFSYKILVFSPATSKSHLISNGRLADELARAGHDVT 50
>AF016440-8|ABD94107.1| 286|Caenorhabditis elegans Dehydrogenases,
short chain protein17, isoform b protein.
Length = 286
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLK 397
A+++LC +P SHN +V ++L + WA KE K L+
Sbjct: 120 AHYLLCNLLLPVLSHNRSNVIVVGSVLHTWPSLDWADVMATKEYEKYLQ 168
>AF016440-7|AAB65901.2| 317|Caenorhabditis elegans Dehydrogenases,
short chain protein17, isoform a protein.
Length = 317
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLK 397
A+++LC +P SHN +V ++L + WA KE K L+
Sbjct: 151 AHYLLCNLLLPVLSHNRSNVIVVGSVLHTWPSLDWADVMATKEYEKYLQ 199
>Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical
protein T01G5.2 protein.
Length = 535
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 HVLCVFPIPSRSHNS-LGKGIVDALLGAGHEVTWATP---FPPKESTKGLKIIDVSATAS 424
++L P + SH+ LGK + D L GH VT+ P ++ KG+KI
Sbjct: 20 NILVYAPAFAASHSKFLGK-LADTLTERGHNVTYLMPVVNIAKRDECKGVKITKDVVIVE 78
Query: 425 VSEMIDMNDQRNAD 466
E M Q+ AD
Sbjct: 79 AGE--KMLSQKQAD 90
>Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical
protein ZC455.5a protein.
Length = 535
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 251 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPF 367
+Y L + P+ SH I + L GH+VT+ PF
Sbjct: 19 SYKFLVISPVYGYSHMKFMAIIANQLADEGHQVTYFQPF 57
>Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical
protein C17G1.3a protein.
Length = 530
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 254 YHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 364
Y +L + SH +VD L+ AGH+VT P
Sbjct: 19 YKILVYSNLFGHSHIKFVGSVVDTLVDAGHDVTVVLP 55
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 374 KESTKGLKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANITRLSLSVPALQQ 541
K KG+ I+ ++ATA+ + + D+ D GI TF A R +L +Q+
Sbjct: 237 KRQFKGVPILGLTATATSNVLDDVKDM----LGIQAALTFRAGFNRSNLKYKVVQK 288
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 374 KESTKGLKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANITRLSLSVPALQQ 541
K KG+ I+ ++ATA+ + + D+ D GI TF A R +L +Q+
Sbjct: 260 KRQFKGVPILGLTATATSNVLDDVKDM----LGIQAALTFRAGFNRSNLKYKVVQK 311
>AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical
protein Y49C4A.8b protein.
Length = 474
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 242 SARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 364
S+ + ++L P + SH N LGK + D L GH VT+ P
Sbjct: 14 SSSSLNILVYSPAYAASHSNFLGK-LADTLTERGHNVTYLMP 54
>AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical
protein Y49C4A.8a protein.
Length = 536
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 242 SARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 364
S+ + ++L P + SH N LGK + D L GH VT+ P
Sbjct: 14 SSSSLNILVYSPAYAASHSNFLGK-LADTLTERGHNVTYLMP 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,470,071
Number of Sequences: 27780
Number of extensions: 271258
Number of successful extensions: 818
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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