Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8o02
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       29   0.031
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   3.6  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   6.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   6.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   6.2  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   8.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.2  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 0.031
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 421 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPI 516
           FE   L+  +L  I + G++KP+P+Q+ ++PI
Sbjct: 198 FEAAGLRNIVLDNIKKSGYKKPTPVQKHALPI 229


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 13  VFG*VNSCDVVVEYRVSSPFLNFYL 87
           +FG + +C V+++        N+YL
Sbjct: 55  IFGNITTCTVIIKNPAMQTATNYYL 79


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 25 VNSCDVVVEYRVSSPFL 75
          +NSCD++ +   + PFL
Sbjct: 9  INSCDLLKKRNENDPFL 25


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 475 IPFQKYPSTILASNKT 428
           I FQKY S  L SN+T
Sbjct: 379 ISFQKYMSGTLNSNET 394


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 25  VNSCDVVVEYRVSSPFL 75
           +NSCD++ +   + PFL
Sbjct: 130 INSCDLLKKRNENDPFL 146


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 25 VNSCDVVVEYRVSSPFL 75
          +NSCD++ +   + PFL
Sbjct: 9  INSCDLLKKRSENDPFL 25


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 207 ETYNHTNYYLSKSN 166
           +TYN+ +YYL  +N
Sbjct: 190 KTYNNIDYYLLAAN 203


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 207 ETYNHTNYYLSKSN 166
           +TYN+ +YYL  +N
Sbjct: 190 KTYNNIDYYLLAAN 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,588
Number of Sequences: 438
Number of extensions: 2174
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)