Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8m23
(578 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0286 + 19833114-19834053,19834149-19834165 31 0.66
07_03_1177 - 24574682-24574852,24575047-24575618,24575711-245760... 30 1.2
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 30 1.2
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213... 30 1.5
05_02_0160 - 7194699-7195019,7195207-7195368,7195806-7195953,719... 30 1.5
11_05_0030 - 18487272-18487544 29 2.0
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 29 2.7
06_03_0750 - 24140988-24141037,24141108-24141345,24142158-241422... 29 3.5
05_01_0080 - 535443-535481,535569-535698,536483-536586,536686-53... 29 3.5
08_01_0262 + 2134038-2134610 28 4.7
06_01_0470 + 3336154-3336708 28 4.7
01_03_0093 - 12422558-12422607,12422679-12422935,12423565-124239... 28 4.7
01_01_0880 + 6903535-6903932,6904931-6905022,6905601-6905680,690... 28 4.7
10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696 28 6.2
09_02_0223 + 5977138-5977459,5979842-5980842 28 6.2
04_01_0074 - 795256-795279,795350-795460 28 6.2
02_05_1120 + 34257504-34258294,34258483-34258571,34258616-342587... 28 6.2
02_02_0489 + 10869482-10871218 28 6.2
12_02_1174 - 26696869-26698191 27 8.2
11_02_0027 - 7504076-7504904,7505024-7505219,7505401-7505467 27 8.2
09_02_0543 + 10427321-10428315,10428440-10429154 27 8.2
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 27 8.2
07_03_0476 - 18547223-18548187,18548743-18549958 27 8.2
07_01_0439 + 3333654-3334217 27 8.2
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 27 8.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 27 8.2
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462... 27 8.2
02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772... 27 8.2
01_07_0081 - 40959279-40959375,40959463-40959589,40960138-409603... 27 8.2
>05_04_0286 + 19833114-19834053,19834149-19834165
Length = 318
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 343 WALPESG-GRCDRLRPVGGGCGPGSFHANETLTCDSW 450
WALPE+ G C R GG CG + C W
Sbjct: 242 WALPEANRGFCGACRATGGVCGHDGDSHGDLCLCGDW 278
>07_03_1177 -
24574682-24574852,24575047-24575618,24575711-24576068,
24576108-24576152
Length = 381
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 298 CEVSPPEFDTDFWGVWALPESGGRCDRLRPVGGGCGPG 411
C +P F D W W L SG R RP+ GG G G
Sbjct: 5 CTCNPRTFSGDGWRWWCL--SGARRAAARPLVGGGGAG 40
>03_05_1096 -
30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 410 PGPQPPPTGRSRS----HRPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCTAPVA 258
P P PPP G S S + D G+A TP+ S ++ GG G ++P A
Sbjct: 22 PPPPPPPPGSSSSPLNRQKQGDPGQA-TPRLSAADEGGSVGGGGVAAASGSSPSA 75
>05_07_0280 -
28920864-28920971,28921076-28921175,28921267-28921394,
28922013-28922180,28922280-28922395,28922584-28922736,
28922904-28923047,28923401-28924133
Length = 549
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 410 PGPQPPPTGRSRSHRPPDSGR--AQTPQKSVSNSG 312
P PQPPP + RS PP Q PQ++ + G
Sbjct: 40 PKPQPPPPQQPRSQPPPPPRHQPQQAPQQAAAEDG 74
>05_02_0160 -
7194699-7195019,7195207-7195368,7195806-7195953,
7196286-7196362,7196717-7196787,7196891-7196977,
7197662-7198201,7198430-7198439
Length = 471
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 404 PQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSG 291
P PPP +R +PP + P +++SGG S+SG
Sbjct: 32 PSPPPAYANRPPQPPST----PPAAMINSSGGSGSYSG 65
>11_05_0030 - 18487272-18487544
Length = 90
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 349 LPESGGRCDRLRPVGGG 399
+ +GGRCD +RP GGG
Sbjct: 4 MQRAGGRCDVIRPAGGG 20
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 410 PGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCT 270
P P PPP+ + R P + R TP + S+S D + + CT
Sbjct: 10 PQPPPPPSPPNPPPRAPRATRTATPDDASSSSAVDDAAALLAEAGCT 56
>06_03_0750 -
24140988-24141037,24141108-24141345,24142158-24142232,
24142345-24142413,24142550-24142581,24143503-24143583,
24143791-24143851,24144135-24144275,24144372-24144563
Length = 312
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 410 PGPQPPPTGRSRSHRPPD---SGRAQTPQKSVSNSGGDTSHSG 291
P P PPP S S R PD G+A + + SG D G
Sbjct: 43 PPPPPPPPPSSSSKRKPDPASKGKAAAKKGKTAASGEDGGDGG 85
>05_01_0080 -
535443-535481,535569-535698,536483-536586,536686-536903,
537755-537762,538146-538183,538475-538668,539168-539296,
539392-539481,539726-539839,540008-540154,540228-540293,
540876-540987
Length = 462
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 437 VKVSFA*KLPGPQPPPTGRSRSHRPPDSGRAQTPQ 333
V S A P P PPP R +P RAQ Q
Sbjct: 317 VDCSLAIPSPPPPPPPPSEMRKTKPSKQSRAQAQQ 351
>08_01_0262 + 2134038-2134610
Length = 190
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -1
Query: 437 VKVSFA*KLPGPQ---PPPTGRSRSHRPPDSGRAQTPQKSVSNSGG 309
VKV A PG P P+ + P + GR TP S S SGG
Sbjct: 124 VKVEAAAAAPGGSSTTPSPSPSPAALPPVNGGRPVTPSSSASKSGG 169
>06_01_0470 + 3336154-3336708
Length = 184
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 449 QESHVKVSFA*KLPGPQPPPTGRSRSHRPPDSGRAQTPQKS 327
Q S V + L PQPPP R R+ + PD R TP S
Sbjct: 142 QHSVVGAAAPVPLQPPQPPPPQRRRT-KNPDLNREPTPDTS 181
>01_03_0093 -
12422558-12422607,12422679-12422935,12423565-12423932,
12423939-12424800,12425247-12425464
Length = 584
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 411 AWATATANRSEPVASPPGLGESPDSPK 331
++ T +PV PGLG+SP SPK
Sbjct: 400 SFGLGTDATQKPVVPKPGLGKSPRSPK 426
>01_01_0880 +
6903535-6903932,6904931-6905022,6905601-6905680,
6905885-6905926,6906001-6906128,6906530-6906710,
6906801-6906979,6907469-6907717,6907950-6908193
Length = 530
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -1
Query: 491 RSNSATIV*SLS*TQESHVKVSFA*KLPGPQPPPTGRSRSHRPP 360
R S T S S + H S LP P P PT S S PP
Sbjct: 3 RGRSTTTTTSSSASNPFHAFASTLPFLPSPSPSPTSASPSPSPP 46
>10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696
Length = 693
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 301 EVSPPEFDTDFWGVWALPES 360
E SPP D D WG W L +S
Sbjct: 234 EGSPPAVDDDRWGPWRLMDS 253
>09_02_0223 + 5977138-5977459,5979842-5980842
Length = 440
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -1
Query: 413 LPGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTS 300
LP P PP + PP SG S + G D+S
Sbjct: 389 LPSPPSPPPSDAEGDAPPPSGDGDEAPGSGAKGGKDSS 426
>04_01_0074 - 795256-795279,795350-795460
Length = 44
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 501 GVEEDFGRNHPQRWCFHG 554
G EED GR+HP+ +C G
Sbjct: 26 GGEEDEGRDHPEAFCMFG 43
>02_05_1120 +
34257504-34258294,34258483-34258571,34258616-34258713,
34259269-34259292,34259314-34259404,34259761-34259813,
34259933-34260151
Length = 454
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -1
Query: 410 PGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTLHL 279
P P PPP R + P G + P S+ D S HL
Sbjct: 31 PPPPPPPNDRDDASPKPSEGEGRNPAASLFQDLRDRLMSTPSHL 74
>02_02_0489 + 10869482-10871218
Length = 578
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 416 KLPGPQPPPTGRSRSHRPPDSGRAQTPQKSVSN 318
K P+P P+G+++ +P S A P+ + S+
Sbjct: 123 KRAAPEPAPSGKAKKAKPEKSSSAAAPEPAPSS 155
>12_02_1174 - 26696869-26698191
Length = 440
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -1
Query: 410 PGPQPPPTGRSRSHRPP---DSGRAQTPQKSVSNSGGD 306
P P P G+ S PP DS R P S + +GGD
Sbjct: 321 PEPAKPAAGKPTSSSPPSTKDSPRPPLPAPSPAANGGD 358
>11_02_0027 - 7504076-7504904,7505024-7505219,7505401-7505467
Length = 363
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 304 VSPPEFDTDFWGVWALPESGGRCDRLRPVGGGCGPGSFHANE 429
+SP F F G W +GGRCD P+ G G H+++
Sbjct: 265 ISPRHF---FNGDW---NTGGRCDNTSPLAKGSGISQNHSDD 300
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = -1
Query: 404 PQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHS-GTLHLYCTAPVAKIYCPK*MPE 228
P PPPT +S P TP + + HS + AP A I P P
Sbjct: 44 PPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAAPSPHSPSPSNAPWVAPAADIPPPPPPPP 103
Query: 227 NSMDISI 207
N + + I
Sbjct: 104 NPLPVII 110
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -2
Query: 520 PKSSSTPRRLDR-TRQQ*YDLSHKPRSRMSRSRLHE--SCLGHSHRQQVGAGRIAPRTRG 350
PK S PRR R ++ DLS P R +R HE L RQ +G G I+P +G
Sbjct: 274 PKDLSPPRRRTRHDSEEPEDLS--PPRRRTRHDSHEPKDKLPPLKRQALGDGDISPPRKG 331
Query: 349 EPRLPKNRCR 320
+ R
Sbjct: 332 RKEVAPKEVR 341
>07_03_0476 - 18547223-18548187,18548743-18549958
Length = 726
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 466 DLSHKPRSRMSRSRLHESCLGHSHRQQVG 380
D HK RS R+R HE G HR++ G
Sbjct: 376 DSVHKLRSHKMRARAHELGAGELHRRKHG 404
>07_01_0439 + 3333654-3334217
Length = 187
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 407 GPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCTAP 264
GP+P P S PP + R + V++ GG +G + +Y P
Sbjct: 25 GPRPQPLIVSPPPPPPPASRPPKKPRVVASGGGGGGDAGPVIVYELTP 72
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 434 KVSFA*KLPGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGT 288
K S + K P P PPP ++ +H +G+ +TP++ S S S S +
Sbjct: 20 KTSSSRKAP-PPPPPLVQAAAHHAA-AGQPETPRRRSSGSPASASASAS 66
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 404 PQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGG 309
P PPP + RPP G P + GG
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGG 381
>02_05_0410 +
28744716-28744841,28745361-28745965,28746151-28746270,
28746597-28746737,28748626-28749370
Length = 578
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 386 GRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCTAPVAK 255
G +RSH +S + + S S ++SHSG H + P+ K
Sbjct: 379 GSTRSHHAKNSSSNSSSSGASSASKNNSSHSGYHHHHHQKPLVK 422
>02_05_0136 +
26174965-26175849,26176965-26177030,26177124-26177258,
26177369-26177434,26177516-26177701,26177777-26177863,
26177985-26178098,26178174-26178298,26178375-26178483,
26179298-26179423,26179511-26179831,26180146-26180269,
26180405-26180529
Length = 822
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 395 PPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSG 291
PP R+ R D A P ++ S+S GD G
Sbjct: 66 PPAARANVEREGDGAEASGPGEASSSSSGDGDRDG 100
>01_07_0081 -
40959279-40959375,40959463-40959589,40960138-40960339,
40962414-40963361
Length = 457
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -1
Query: 410 PGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCTAPVA 258
P P PP T PP + P S GD S S T+P A
Sbjct: 22 PPPPPPVTETKPEPEPPLPTTSIDPTPSGDEESGDDSSSSVSSASSTSPTA 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,048,609
Number of Sequences: 37544
Number of extensions: 449941
Number of successful extensions: 2190
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2155
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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