Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8m13
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 47 8e-06
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 43 1e-04
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 38 0.007
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 31 0.44
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 31 0.59
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 29 1.8
U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 29 3.1
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 28 5.5
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF125956-5|AAD14722.2| 353|Caenorhabditis elegans Serpentine re... 28 5.5
Z81529-2|CAB04298.2| 133|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 9.5
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 47.2 bits (107), Expect = 8e-06
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +3
Query: 138 MVTVGPDPAQVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNS 317
++ + P ++ CP C ++T+ + T I P+C+ SC +
Sbjct: 65 IIRLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDI 124
Query: 318 DHYCPNCNAYIGTYTR 365
H CPNC A IG + R
Sbjct: 125 IHTCPNCRAMIGVHRR 140
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +3
Query: 165 QVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPNCNA 344
+ TC SC V T + T I+ P+C+DSC ++ HYCP CNA
Sbjct: 90 ETTCYSCGKYVHTLPKFVIGSLTWIV-FILVLICFFPLAFVPFCLDSCKDAHHYCPRCNA 148
Query: 345 YIGTYTR*F 371
+G R F
Sbjct: 149 LLGIKKRIF 157
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 43.2 bits (97), Expect = 1e-04
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 288 PYCMDSCMNSDHYCPNCNAYIGTYTR 365
P+C+++ +++HYCP+C A+IGTY R
Sbjct: 80 PFCVETFKDAEHYCPSCRAWIGTYRR 105
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/64 (28%), Positives = 24/64 (37%)
Frame = +3
Query: 174 CPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPNCNAYIG 353
CP C ++MT +TT +I C D + DH CPNC +
Sbjct: 36 CPKCQTTIMTSVTTHIGMCWWLICFFGTFLFCWPILIC-LCFDVSKDVDHNCPNCGLLLA 94
Query: 354 TYTR 365
T R
Sbjct: 95 TSNR 98
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/65 (23%), Positives = 26/65 (40%)
Frame = +3
Query: 156 DPAQVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPN 335
+P QV C C + +T+ T+ ++ C DS ++ HYCP+
Sbjct: 17 EPHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCLLFWPICYWL--CCDSSKDTMHYCPS 74
Query: 336 CNAYI 350
C +
Sbjct: 75 CGTLL 79
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = +3
Query: 159 PAQVTCPSCHASVMTKITTKASTKTHII------AXXXXXXXXXXXXXXPYCMDSCMNSD 320
P ++ CP C +++ I A II P+ +D ++ +
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVPFFLDQLLDVN 102
Query: 321 HYCPNCNAYIGTYTR 365
H CP C ++G + R
Sbjct: 103 HSCPACKKFLGRFNR 117
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/70 (22%), Positives = 28/70 (40%)
Frame = +3
Query: 156 DPAQVTCPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPN 335
+P CP C+ +V T++ + + +C+D +S H CPN
Sbjct: 65 EPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVFFPLLCC--FCLDGFKDSRHSCPN 122
Query: 336 CNAYIGTYTR 365
C + +Y R
Sbjct: 123 CGTIL-SYKR 131
>U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical
protein F53A9.8 protein.
Length = 87
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 197 HDQNHDQSQHEDSH-HRTDPVFVHVFALRMSAILHGLVHEFGPLLSKLQ 340
H +HD+ HED H H D VH A HG H+ G +K Q
Sbjct: 13 HHDHHDEHHHEDHHEHGADGEHVH-HAGDHCDTQHGGNHQAGEHCAKTQ 60
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +3
Query: 174 CPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPNCNAYIG 353
CP C SV T+ T II C S + H+CPNC +
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTMLA 146
Query: 354 TYTR 365
R
Sbjct: 147 CKKR 150
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 5.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 197 HDQNHDQSQHEDSHHRTDPVFVHVFAL 277
HD NH +H+ SH ++ + V F +
Sbjct: 149 HDHNHSHKEHDHSHDHSNQLRVGTFVI 175
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -3
Query: 342 RCSLDSNGP---NSCTSPCSMADIRKANTCTNTGS 247
RCS+DS P ++C CS+A++ + TC ++ +
Sbjct: 1737 RCSVDSICPAESDTCLPVCSVANVCSSGTCVSSNT 1771
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -3
Query: 342 RCSLDSNGP---NSCTSPCSMADIRKANTCTNTGS 247
RCS+DS P ++C CS+A++ + TC ++ +
Sbjct: 1737 RCSVDSICPAESDTCLPVCSVANVCSSGTCVSSNT 1771
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 159 PAQVTCPSCHASVMTK 206
P+ VTCP C+A V+TK
Sbjct: 8 PSLVTCPQCNAVVLTK 23
>AF125956-5|AAD14722.2| 353|Caenorhabditis elegans Serpentine
receptor, class h protein80 protein.
Length = 353
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +3
Query: 327 CPNCNAYIGTYTR*FHNCERIAYSCMPFDDLHLYSFVFIFHIHMINLKFGLMLYSSVEYI 506
CP C ++ ++ H A +PF + +F HM N K L+ + +
Sbjct: 15 CPKCEYFLCSWQDYAHTMHIFAGIAIPFYSFGFHCILFKTPKHMNNSKVSLLNFHFWSCL 74
Query: 507 LQLHLKALAVVNVLYL 554
L + AL V L+L
Sbjct: 75 LDIIFSAL-VTPYLFL 89
>Z81529-2|CAB04298.2| 133|Caenorhabditis elegans Hypothetical
protein F35E8.2 protein.
Length = 133
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 422 VQIIEWHTGIRNTFTIMKSSCIGSNVGVAVWT 327
VQ++ W + +R ++ SC N +WT
Sbjct: 3 VQVVSWFSWLREPIQLLDLSCTSFNGTAFIWT 34
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/64 (21%), Positives = 22/64 (34%)
Frame = +3
Query: 174 CPSCHASVMTKITTKASTKTHIIAXXXXXXXXXXXXXXPYCMDSCMNSDHYCPNCNAYIG 353
CP+C + MT + T +I C D + +H CP+C +
Sbjct: 36 CPTCEKAYMTSVNTHIGVCWWLICFFGTVLCCFPFLFF-LCCDVSKDVNHNCPSCGMLLA 94
Query: 354 TYTR 365
R
Sbjct: 95 KKNR 98
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 196 TDAWHDGQVTCAGSGPTV-TILIDQNSPLH 110
TD +H+G G GPT L + N PLH
Sbjct: 4913 TDDYHEGSANDDGFGPTTQDSLFEFNPPLH 4942
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 196 TDAWHDGQVTCAGSGPTV-TILIDQNSPLH 110
TD +H+G G GPT L + N PLH
Sbjct: 4890 TDDYHEGSANDDGFGPTTQDSLFEFNPPLH 4919
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 196 TDAWHDGQVTCAGSGPTV-TILIDQNSPLH 110
TD +H+G G GPT L + N PLH
Sbjct: 4913 TDDYHEGSANDDGFGPTTQDSLFEFNPPLH 4942
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 196 TDAWHDGQVTCAGSGPTV-TILIDQNSPLH 110
TD +H+G G GPT L + N PLH
Sbjct: 4890 TDDYHEGSANDDGFGPTTQDSLFEFNPPLH 4919
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 196 TDAWHDGQVTCAGSGPTV-TILIDQNSPLH 110
TD +H+G G GPT L + N PLH
Sbjct: 4913 TDDYHEGSANDDGFGPTTQDSLFEFNPPLH 4942
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,054,931
Number of Sequences: 27780
Number of extensions: 265666
Number of successful extensions: 800
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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