Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8m03
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 154 5e-38
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 29 2.2
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 29 2.2
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 29 2.2
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 29 2.9
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 29 2.9
Z34801-7|CAJ76938.1| 85|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z34801-6|CAA84329.1| 428|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF000299-5|AAC47977.1| 335|Caenorhabditis elegans Hypothetical ... 27 6.8
U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1 (de... 27 9.0
U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1 (de... 27 9.0
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 154 bits (373), Expect = 5e-38
Identities = 67/122 (54%), Positives = 94/122 (77%)
Frame = +1
Query: 184 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 363
+ G ++EQD RFSDKEKKL+K MKF L Q++D+++ +DV+KPWIT ++ +IL MEDD
Sbjct: 6 FRGANSEQDGRFSDKEKKLLKTMKFEPQLEQKIDLNRCNMDVIKPWITARVNDILGMEDD 65
Query: 364 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 543
VV+EY+ +Q+++K PK +QIN+TGFLN + AR F+G+LW LL+ A ASE+GIP S
Sbjct: 66 VVVEYILSQIDDKNLNPKLLQINVTGFLNARRAREFVGDLWNLLIEANASEDGIPASLVN 125
Query: 544 QK 549
QK
Sbjct: 126 QK 127
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 483
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 689
Query: 484 WELLL-SAQASENGI 525
W LL+ QA GI
Sbjct: 690 WRLLIYEGQARRLGI 704
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 483
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 689
Query: 484 WELLL-SAQASENGI 525
W LL+ QA GI
Sbjct: 690 WRLLIYEGQARRLGI 704
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 483
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 474 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 531
Query: 484 WELLL-SAQASENGI 525
W LL+ QA GI
Sbjct: 532 WRLLIYEGQARRLGI 546
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 506 CALSNSSHNSPMKRRAFFPFRNPVKLICIF-FGHGNFSSSWLVTYSMTTSSSMFRI 342
C LS + H P K F F V +I ++ H NF + T M T+ S+ RI
Sbjct: 152 CLLSTALHGIPFKIWQFMNFFITVAVIFVYSLAHINFQTLKKSTVHMKTAKSVDRI 207
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 307 VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA 462
V+KP I Q ++LNM+ +I+ N E P +++++N+ +LN K +
Sbjct: 867 VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGS 916
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 307 VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA 462
V+KP I Q ++LNM+ +I+ N E P +++++N+ +LN K +
Sbjct: 813 VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGS 862
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 286 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 396
+S +K DVL P I + I+N+E DV +E +T E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 286 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 396
+S +K DVL P I + I+N+E DV +E +T E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174
>Z34801-7|CAJ76938.1| 85|Caenorhabditis elegans Hypothetical
protein F59A2.4b protein.
Length = 85
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 211 TRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKP--WITQKI---TEILNMEDDV 366
+R + ++ ++K FG CL +VD+ K + +L P I K+ ++I +++D +
Sbjct: 27 SRSTKADENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLDDQI 83
>Z34801-6|CAA84329.1| 428|Caenorhabditis elegans Hypothetical
protein F59A2.4a protein.
Length = 428
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 211 TRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKP--WITQKI---TEILNMEDDV 366
+R + ++ ++K FG CL +VD+ K + +L P I K+ ++I +++D +
Sbjct: 370 SRSTKADENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLDDQI 426
>AF000299-5|AAC47977.1| 335|Caenorhabditis elegans Hypothetical
protein E03H12.3 protein.
Length = 335
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 388 QLEEKFPCPKKMQINLTGFLNGKN 459
+++ +F CPK M IN + NG N
Sbjct: 121 KVDSQFQCPKNMTINQYNYTNGFN 144
>U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform a protein.
Length = 839
Score = 27.1 bits (57), Expect = 9.0
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +1
Query: 154 IDFSVSKMMMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQK 333
+D+S S M Y G RF K ++ + QM L + V + IT +
Sbjct: 445 VDYSSSMSMFYPGQLLSNLNRFKAKAREELDQMAIASKLNDSKTLKIVNPSIRIERITSR 504
Query: 334 ITEILNMEDDVVIE 375
T I +V IE
Sbjct: 505 STIIGLGNSEVDIE 518
>U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform b protein.
Length = 842
Score = 27.1 bits (57), Expect = 9.0
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +1
Query: 154 IDFSVSKMMMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQK 333
+D+S S M Y G RF K ++ + QM L + V + IT +
Sbjct: 448 VDYSSSMSMFYPGQLLSNLNRFKAKAREELDQMAIASKLNDSKTLKIVNPSIRIERITSR 507
Query: 334 ITEILNMEDDVVIE 375
T I +V IE
Sbjct: 508 STIIGLGNSEVDIE 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,798,195
Number of Sequences: 27780
Number of extensions: 259219
Number of successful extensions: 747
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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