Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8l19
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 107 1e-24
SPAC977.16c |dak2||dihydroxyacetone kinase Dak2 |Schizosaccharom... 91 2e-19
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.020
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 31 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.14
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.56
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.74
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 28 0.97
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 28 1.3
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 27 1.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 3.9
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ... 26 3.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.2
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 5.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 6.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 6.9
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 25 6.9
SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomy... 25 9.1
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.1
SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces pom... 25 9.1
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 9.1
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 107 bits (258), Expect = 1e-24
Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Frame = +3
Query: 135 PETCVDDNLRGVVAVYPQLQLHPKHRVITIRRQDDSKRVAILGGGGSGHEPFASGFIGSG 314
PE V D L+ + + L +H + + I + K V+++ GGG+GHEP S F+G G
Sbjct: 9 PEVLVLDGLKSLADMNKTLTVHEEGKFIYFHDYN-KKNVSVISGGGAGHEPTHSSFVGKG 67
Query: 315 MLDGAVAGGVFASPPTGHVLYGIAQLHKYNSGGVLVIIGNYTGDRLNFXXXXXXXXXXXX 494
ML AV+G +FASP + + GI Q+ + G LVI NYTGD L+F
Sbjct: 68 MLTAAVSGSIFASPSSKQIYTGIKQVE--SEAGTLVICKNYTGDILHFGMALEKQRTAGK 125
Query: 495 XVEGLIVGEDVASSKNKT---GGRSMVGEVLFYKLCGAMALKGYDLETI 632
E + V +DV+ + K+ G R + G VL +K+ GA A +G LE +
Sbjct: 126 KAELIAVADDVSVGRKKSGKVGRRGLSGTVLVHKIAGAAAARGLPLEAV 174
>SPAC977.16c |dak2||dihydroxyacetone kinase Dak2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 90.6 bits (215), Expect = 2e-19
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Frame = +3
Query: 207 HRVITIRRQDDSKRVAILGGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGIA 386
+R + D +V ++ GGGSGHEP +GF+G G LD G +FASP T + +
Sbjct: 37 YRTASAPGSGDLPKVTLVSGGGSGHEPTHAGFVGDGALDAVACGDIFASPSTKQIYSALK 96
Query: 387 QLHKYNSGGVLVIIGNYTGDRLNFXXXXXXXXXXXXXVEGLIVGEDVASSKNK---TGGR 557
+ + G L+I+ NYTGD ++F VE + VG+DV+ K + G R
Sbjct: 97 AV--ASPKGTLIIVKNYTGDIIHFGLAAERAKAAGMNVELVAVGDDVSVGKKRGALVGRR 154
Query: 558 SMVGEVLFYKLCGAMALKGYDLETI 632
+ VL +K+ G+ A G DL +
Sbjct: 155 GLGATVLVHKIAGSAAALGLDLHQV 179
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.020
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Frame = -3
Query: 517 PTIRPSTLIPAILAFSMA--LPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGG--- 353
P +PS +P + A S A +PK S + +P+ + PP + S A P P G
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP-VPKPSVAAPPVPAPSGAPPV 1161
Query: 352 ---EAKTPPATAPSSIPEPMNPDAKGSCPDPPP 263
PP APSS P+ A G P PPP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 30.3 bits (65), Expect = 0.24
Identities = 28/102 (27%), Positives = 42/102 (41%)
Frame = -3
Query: 568 PTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCS 389
P++ PPV + + + P +PS P + A S A P +P + P + S
Sbjct: 1126 PSVAAPPVP--VPSGAPPVPKPSVAAPPVPAPSGAPP--------VPKPSVAAPPVPAPS 1175
Query: 388 CAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPP 263
IP P G PP + +P+P + G P PPP
Sbjct: 1176 SGIPPVPKPAAGVPPVPPPSEAPPVPKP----SVGVPPVPPP 1213
Score = 28.3 bits (60), Expect = 0.97
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = -3
Query: 568 PTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMIT--RTPPELYL 395
P++ PPV + P +P+ +P + S A P + V +P + T P +
Sbjct: 1164 PSVAAPPVP-APSSGIPPVPKPAAGVPPVPPPSEA-PPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 394 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDP 269
S +P P AK PP APSS P + S P P
Sbjct: 1222 PSAGLPPVPVPT---AKAPPVPAPSS-EAPSVSTPRSSVPSP 1259
Score = 26.2 bits (55), Expect = 3.9
Identities = 29/99 (29%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Frame = -3
Query: 553 PPVLFLLEATSSPTIRPSTLIPAILAFSMA-LPKFSRSPV*LPMITRTPPELYLCSCAIP 377
PPV L A + P PST P + S +PK S P P + S P
Sbjct: 1022 PPVP-LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS-EIPSIPAP 1079
Query: 376 YNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
PV + PP P S+ P P + P P P
Sbjct: 1080 SGAPPVPAPSGIPPVPKP-SVAAPPVPKPSVAVPPVPAP 1117
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPR 257
G +A P AP SIP P+ S P PP+
Sbjct: 955 GRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPK 988
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 31.5 bits (68), Expect = 0.10
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = -3
Query: 538 LLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNT--- 368
L+ ++ T+ PST +P+ +F ALP S +PV + I+ + E + S + P T
Sbjct: 30 LVNTLTAHTVHPSTELPSATSFPSALPN-SENPV-IQNISSSSSEPHHTSQSTPGETSSP 87
Query: 367 -CPVGG 353
CPV G
Sbjct: 88 VCPVSG 93
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.14
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Frame = -3
Query: 580 NSTSPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRT-PPE 404
NS P+++ L + + + + A L S P + +P P I + PPE
Sbjct: 186 NSLDPSLIDS--LMKMGISQDQIAENADFVKAYLNESAGTPTSTSAPPIPPSIPSSRPPE 243
Query: 403 LY--LCSCAIPYNTCPVGGEAKTPPATAPSSI-PEPMNPDAKGSCPDPPPP 260
L + A P P G +PP + P I P MNP + P PP
Sbjct: 244 RVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPPRMA 251
P + A SIP P P + S P PPPPR A
Sbjct: 343 PRSNAAGSIPLP--PQGR-SAPPPPPPRSA 369
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDP-PPPRMATL 245
P A P + PSS P P P P PPP T+
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTV 264
Score = 25.4 bits (53), Expect = 6.9
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Frame = -3
Query: 523 SSPTIRPSTLIPAILAFSMA-LPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEA 347
S P+ RP +P++ A + +P S V P +PP P + P
Sbjct: 235 SIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP--PNSPPRPIA-----PVSMNPAINST 287
Query: 346 KTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
PP PSS A P PPPP
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 25.4 bits (53), Expect = 6.9
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 364 PVGGEAKT--PPATAPSSIPEPMNPDAKGSCPDPPPPRM 254
P+G ++T PP P S+P P A S P PP +
Sbjct: 405 PLGNASRTSTPPVPTPPSLP----PSAPPSLPPSAPPSL 439
Score = 25.0 bits (52), Expect = 9.1
Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Frame = -3
Query: 613 PFKAIAPHSL*---NSTSPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRS 443
P + IAP S+ NSTS L PP + A + + P + P
Sbjct: 271 PPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNG 330
Query: 442 PV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSS--IPEPMNPDAKGSCPDP 269
+ PP + +IP PP +APS+ P P++ S P
Sbjct: 331 SSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 268 PPP 260
PPP
Sbjct: 391 PPP 393
Score = 25.0 bits (52), Expect = 9.1
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = -3
Query: 517 PTIRPST-LIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKT 341
P PST P L+ S A+ P +P R+ P L A +T PV
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP--GRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPP 263
PP+ P S+P P P PP
Sbjct: 424 PPSAPP-SLPPSAPPSLPMGAPAAPP 448
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.56
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 337 PATAPSSIPEPMNPDAKGSCPDPPPP 260
P AP+ IP P G P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 29.1 bits (62), Expect = 0.56
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 337 PATAPSSIPEPMNPDAKGSCPDPPPPRMA 251
PA AP +P P P G P PPPP +A
Sbjct: 744 PAPAPIPVPPPA-PIMGGPPPPPPPPGVA 771
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 313 PEPMNPDAKGSCPDPPPP 260
P P P G+ P PPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPP 780
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 0.74
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 379 PYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P + P A TPP S P P P P PPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.3 bits (60), Expect = 0.97
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMA 251
GG A P + P P+ P S P PPPP M+
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQM-SAPTPPPPPMS 1713
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 385 AIPYNTCPVGGEAKTPP-ATAPSSIPEPMNPDAKGSCPDPP--PP 260
A P +T PV ++ PP +AP+ P PM+ S P P PP
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 412 PPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDP 269
PP++ + P + P A PA PS+ P P+ + S P+P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 28.3 bits (60), Expect = 0.97
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 475 KLK*QELRWKVLSWERMWLQARTKQAGAVWSEKY 576
K K QE R W ++W Q K A A + ++Y
Sbjct: 637 KTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRY 670
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = -3
Query: 508 RPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPAT 329
RPS + + + ++ S P P+ PP + + P + PV E P
Sbjct: 364 RPSHTLSELSSPALTSENLSSKPS--PLFPPPPPRVKSLATNKPVSM-PVSTEQSDPSVA 420
Query: 328 APSSIPEPMNPDAKGSCPD 272
A SS ++ KGS PD
Sbjct: 421 ASSSSSSQLDVVLKGSIPD 439
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 267 GGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGIA 386
G S H F+ L AVA G+ S PTG Y ++
Sbjct: 215 GLSPHMAVLKVFVNDKFLTEAVADGLIISTPTGSTAYSLS 254
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNPDAKGSCP 275
GGEA P P+ IP P+ A + P
Sbjct: 882 GGEALAAPVAVPAPIPAPVAEPAPPAAP 909
>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
Ade6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 552
Score = 26.2 bits (55), Expect = 3.9
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 210 RVITIRRQDDSK--RVAILGGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGI 383
R++T R S+ RV I G GG+ H P GM+ V P G L G+
Sbjct: 428 RMVTYARTAASRGLRVIIAGAGGAAHLP--------GMVAAMTPLPVIGVPVKGSTLDGV 479
Query: 384 AQLH 395
LH
Sbjct: 480 DSLH 483
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 5.2
Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 7/114 (6%)
Frame = -3
Query: 526 TSSPTIRPSTLIP----AILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPV 359
T+S + ST IP + + +P S S P + S +P +
Sbjct: 280 TTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSC 339
Query: 358 GGEAKTPP---ATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSSCLLMVMTRC 206
PP +T P + P + S P PP +T SS LL T C
Sbjct: 340 TTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSC 393
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 5.2
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = -3
Query: 529 ATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGE 350
AT +PT +T PA +A + ++P P+ + T PP +IP N P
Sbjct: 217 ATPAPTSAANT--PATIA-ATSIPPVPNVPL-VGATTAVPP------LSIP-NVLPFTAA 265
Query: 349 AKTPPATAPSSIPEPMNPDAKGSCPDPPP 263
P A + PM P P PPP
Sbjct: 266 QHFPGMPAMPMMNVPMGPGGAPLVPPPPP 294
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P+G A PA P P P P + PPP
Sbjct: 712 PMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPP 746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 346 KTPPATAPSSIPEPMNPDAKGSCPDPPPPR 257
K+ + AP S P P P ++ P PPR
Sbjct: 117 KSSASAAPPSAPAPPTPQSELRPPTSAPPR 146
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 355 GEAKTPPATAPSSIPEPMNPDAKGSCPDPPP 263
G T A+ PS+ P+ P ++G D PP
Sbjct: 120 GITSTTSASPPSAPAPPLPPSSEGPAVDIPP 150
>SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 764
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 574 TSPTILRPPV-LFLLEATSSPTIRPSTLIPAILAFSMALPK 455
T P ++ P LF+ +A +I+P L+P +L + L K
Sbjct: 161 TRPVLVGPVTYLFIAKAAKGSSIKPIELLPKLLPVYVELIK 201
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 264 GGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGI 383
GG SG E G S + G+ GG SP + L+G+
Sbjct: 205 GGSSGGEGALLGIKASVLGIGSDIGGSIRSPAANNGLFGL 244
>SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 313 PEPMNPDAKGSCPDPPPPRMATL 245
PE +N + + CP PP R A L
Sbjct: 3 PEQLNQEEESKCPVPPEVRDAWL 25
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = -3
Query: 343 TPPATAPSSIPEPMNPDAKG-----SCPDPPPP 260
T A++PS+I +P P A + P PPPP
Sbjct: 1068 TSAASSPSNISKPSAPVANNVSKPSAVPPPPPP 1100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,800,961
Number of Sequences: 5004
Number of extensions: 61444
Number of successful extensions: 224
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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