Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8l19
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical... 119 2e-27
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 38 0.008
Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical pr... 36 0.024
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.097
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 33 0.13
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 33 0.13
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 33 0.13
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 33 0.17
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 33 0.22
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.30
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.30
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.30
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 32 0.30
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 32 0.39
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 32 0.39
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 31 0.52
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.52
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 31 0.69
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.69
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.69
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 31 0.69
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 31 0.69
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 31 0.69
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.69
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 0.69
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 31 0.91
Z46241-2|CAA86315.1| 144|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z46241-1|CAA86323.1| 462|Caenorhabditis elegans Hypothetical pr... 30 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.2
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 30 1.6
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.8
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 29 2.8
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 2.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.8
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 3.7
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 4.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 4.8
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 28 4.8
U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical pr... 28 4.8
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 4.8
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 4.8
Z81098-1|CAB03183.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 28 6.4
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 6.4
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 6.4
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 6.4
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 6.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 6.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 6.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 6.4
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 27 8.4
U64836-8|AAG24063.1| 339|Caenorhabditis elegans Serpentine rece... 27 8.4
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 8.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 27 8.4
AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical ... 27 8.4
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 27 8.4
>AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical
protein W02H5.8 protein.
Length = 578
Score = 119 bits (286), Expect = 2e-27
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
Frame = +3
Query: 138 ETCVDDNLRGVVAVYPQLQLHPK-HRVITIRRQDDSKRVAILGGGGSGHEPFASGFIGSG 314
E VDD L G+V+ ++ H RV+ I + S V+++ GGGSGHEP+A+G++G G
Sbjct: 10 EEAVDDALFGLVSSNSNVKFHKSCRRVVHITDLNPSHHVSLIAGGGSGHEPYAAGYVGKG 69
Query: 315 MLDGAVAGGVFASPPTGHVLYGIAQLHKYNSGGVLVIIGNYTGDRLNFXXXXXXXXXXXX 494
+L A+AG VFASPP+ +V + + + +G +L +I NYTGDRLNF
Sbjct: 70 LLTAAIAGNVFASPPSRNVQAAL-EATRGEAGAILFVI-NYTGDRLNFGLAAERFNASGG 127
Query: 495 XVEGLIVGEDVA--SSKNKTGGRSMVGEVLFYKLCGAMALKGYDLETI 632
+ + +DVA S +K G R + G VL K+ GAMA +G L+ I
Sbjct: 128 TARVVTIADDVAIDSPNSKVGRRGLAGAVLTIKIAGAMAWEGKSLDEI 175
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 379 PYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P + CP G K P AP I +P NP +G +P PP
Sbjct: 135 PCSPCPAGPPGKPGPQGAPGDIGQPGNPGERGMDGEPGPP 174
>Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical
protein C09G1.4 protein.
Length = 546
Score = 35.9 bits (79), Expect = 0.024
Identities = 26/107 (24%), Positives = 46/107 (42%)
Frame = -3
Query: 553 PPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPY 374
P + + A +P I + PA + + ++ + + P ++RTPP +C+
Sbjct: 160 PQEMLMNSAVGAPQITSTFQQPASYMQNSSDAQYKMNKIEYPPVSRTPP----VACSSRT 215
Query: 373 NTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
T + P ++ P P+P D S P+PPP +A L S
Sbjct: 216 GTLQRTPNRRLPISSTPQ--PQPTYADQMQSLPEPPPYTIAMQRLRS 260
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.097
Identities = 23/57 (40%), Positives = 25/57 (43%)
Frame = -3
Query: 430 PMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P + RTPP P T P + PP T PS PEP NP P PPPP
Sbjct: 144 PRVPRTPPPRSPPPRRPPM-TPP--SPQRRPPRTPPS--PEPRNPPRTPPSPIPPPP 195
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 337 PATAPSSIPEPMNPDAKGSCPDPPPPR 257
P +P P + D + S P PPPPR
Sbjct: 103 PGQEGHQVPAPQHGDHEASPPPPPPPR 129
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 469 MALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDA 290
M P F P+ +P P ++ A PY P PP + P S+P P + A
Sbjct: 87 MGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAA 146
Query: 289 KGSCPDPP 266
P PP
Sbjct: 147 APIVPPPP 154
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 469 MALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDA 290
M P F P+ +P P ++ A PY P PP + P S+P P + A
Sbjct: 110 MGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAA 169
Query: 289 KGSCPDPP 266
P PP
Sbjct: 170 APIVPPPP 177
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 469 MALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDA 290
M P F P+ +P P ++ A PY P PP + P S+P P + A
Sbjct: 360 MGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAA 419
Query: 289 KGSCPDPP 266
P PP
Sbjct: 420 APIVPPPP 427
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = -3
Query: 571 SPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLC 392
+P PV+ A + P P+ ++ A AF+ P ++ +PV PMI P L
Sbjct: 77 APAFAPAPVVAAAPALA-PAYAPAPVVAAAPAFA---PAYAPAPVASPMIAAAPA---LA 129
Query: 391 SCAIPYNTCPVGGEAKTPPATAPSSIP 311
+ +I N PV PA AP+++P
Sbjct: 130 AASI--NGLPVAAAPAFAPAFAPAAVP 154
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Frame = -3
Query: 394 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKG-SCPDPPP----PRMATLLLSSC 230
C C C +G PP +P +P P P CP PPP P T+
Sbjct: 226 CGCGSSCGGCNMGCSC-LPPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPPVTMYQPCM 284
Query: 229 LLMVMTRCFGCSCNCG 182
+ + RC G CG
Sbjct: 285 VPQYVPRCSGGCGGCG 300
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
P+GG A AP P P+ P G+ P PPPP L++S
Sbjct: 221 PIGGIAPVNAHGAPP--PPPLPPVGAGAPPPPPPPPPPAQLMAS 262
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
P+GG A AP P P+ P G+ P PPPP L++S
Sbjct: 207 PIGGIAPVNAHGAPP--PPPLPPVGAGAPPPPPPPPPPAQLMAS 248
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
P+GG A AP P P+ P G+ P PPPP L++S
Sbjct: 207 PIGGIAPVNAHGAPP--PPPLPPVGAGAPPPPPPPPPPAQLMAS 248
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 32.3 bits (70), Expect = 0.30
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Frame = -3
Query: 520 SPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKT 341
S T P T P ++A + A PK S +P P T PP + AIP E+ T
Sbjct: 209 STTSEPLTSAPRMVATTDA-PK-STAPATDPPRTTIPPAIVTTE-AIPPEVTTTTSESST 265
Query: 340 PPA------TAPSSIPEPMNPDAKGSCPDPP----PPRMAT 248
P +APS + P+A DPP PP + T
Sbjct: 266 APVPPEPLTSAPSMVATTDPPEATAPATDPPTTMIPPAVVT 306
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 457 KFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPM 302
+ SRSPV P+++ PP IP T P E ++PP+ P+S+P P+
Sbjct: 249 RISRSPVPPPVLSIPPPP----PPNIPLPTIPQ--EVQSPPSPRPTSVPPPI 294
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 457 KFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPM 302
+ SRSPV P+++ PP IP T P E ++PP+ P+S+P P+
Sbjct: 249 RISRSPVPPPVLSIPPPP----PPNIPLPTIPQ--EVQSPPSPRPTSVPPPI 294
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 31.5 bits (68), Expect = 0.52
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +3
Query: 261 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGIAQLHKYNSGGVLVIIGNYT 440
GGGG G GF GSG+L G++ G S GH YG Y GG + G Y+
Sbjct: 237 GGGGGGFGSTGLGF-GSGILAGSLLGYGLGSMWGGHHSYG-GWGGGYGGGGYGMAGGYYS 294
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.5 bits (68), Expect = 0.52
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = -3
Query: 574 TSPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPM----ITRTPP 407
T+PT+ + AT PT P+T+ A S A P + SP P + +PP
Sbjct: 576 TTPTVPVTTTVVPSSATV-PTTPPTTVTVAATTTSKA-PVVTTSPTLAPTSPTKLPTSPP 633
Query: 406 ELYLCSCAIPYN-TCPVGGEAK-TPPATAPSSIPEPMNPDAKGSCPDPPPPRMAT 248
S P N T P T TAP++ P+NP + + P PP T
Sbjct: 634 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTA---PVNPTSPTTAPTVPPVTTTT 685
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/98 (24%), Positives = 35/98 (35%)
Frame = -3
Query: 526 TSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEA 347
T++P P+T P + P + V +P T +P P T P
Sbjct: 497 TNTPPANPTTATPTTVG--TMTPSTGTTTVPVPTTTGSPTTQTTAPVTKP--TVPSSTTQ 552
Query: 346 KTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
PP T P+S P + P P T++ SS
Sbjct: 553 TAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSS 590
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.52
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = -3
Query: 574 TSPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPM----ITRTPP 407
T+PT+ + AT PT P+T+ A S A P + SP P + +PP
Sbjct: 632 TTPTVPVTTTVVPSSATV-PTTPPTTVTVAATTTSKA-PVVTTSPTLAPTSPTKLPTSPP 689
Query: 406 ELYLCSCAIPYN-TCPVGGEAK-TPPATAPSSIPEPMNPDAKGSCPDPPPPRMAT 248
S P N T P T TAP++ P+NP + + P PP T
Sbjct: 690 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTA---PVNPTSPTTAPTVPPVTTTT 741
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/98 (24%), Positives = 36/98 (36%)
Frame = -3
Query: 526 TSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEA 347
T + +P+T P + S+ P + V +P T +P P T P
Sbjct: 552 THTTASQPTTTKPVVTTNSVT-PSTGTTTVPVPTTTGSPTTQTTAPVTKP--TVPSSTTQ 608
Query: 346 KTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
PP T P+S P + P P T++ SS
Sbjct: 609 TAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSS 646
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 254
PP T P +IP ++ P PPPPR+
Sbjct: 422 PPTTEPPNIPYCWQQQSRLFAPSPPPPRV 450
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 0.69
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = -3
Query: 343 TPPATAP-SSIPEPMNPDAKGSCPDPPPPRMATLL-LSSCLLMVMTRCFGCSCNC----G 182
TPP+T+ P P+ P + G+ P PPPP L+ +++ ++M+ G S +
Sbjct: 786 TPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAASAPVLMSNSKGISADALKSVQ 845
Query: 181 YTATTPRKLSSTHVS 137
PR+ S+ VS
Sbjct: 846 LKKAEPRETSAASVS 860
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -3
Query: 433 LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
LP TP + +IP P PP P+ + P + S P PPPP
Sbjct: 747 LPRSASTPQPIQQQQSSIPPPPPP-----PPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 0.69
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = -3
Query: 343 TPPATAP-SSIPEPMNPDAKGSCPDPPPPRMATLL-LSSCLLMVMTRCFGCSCNC----G 182
TPP+T+ P P+ P + G+ P PPPP L+ +++ ++M+ G S +
Sbjct: 786 TPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAASAPVLMSNSKGISADALKSVQ 845
Query: 181 YTATTPRKLSSTHVS 137
PR+ S+ VS
Sbjct: 846 LKKAEPRETSAASVS 860
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -3
Query: 433 LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
LP TP + +IP P PP P+ + P + S P PPPP
Sbjct: 747 LPRSASTPQPIQQQQSSIPPPPPP-----PPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 261 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASP 356
GGGG GH+PF+S F G G GG +P
Sbjct: 98 GGGGGGHDPFSS-FFGDFFGGGGGHGGEEGTP 128
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 0.69
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = -3
Query: 472 SMALPKFSRSPV*---LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATA---PSSIP 311
S ALP + P LP IT PP P P+ G PP P S
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 310 EPMNPDAKGSCPDPPPP 260
P P G CP PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 254
PP P P P KG P PPPP M
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
GG + PP T P P P G P PPPP
Sbjct: 701 GGSSALPPITG-GPPPPPGLPPITGGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.69
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = -3
Query: 472 SMALPKFSRSPV*---LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATA---PSSIP 311
S ALP + P LP IT PP P P+ G PP P S
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 310 EPMNPDAKGSCPDPPPP 260
P P G CP PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 254
PP P P P KG P PPPP M
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
GG + PP T P P P G P PPPP
Sbjct: 701 GGSSALPPITG-GPPPPPGLPPITGGPPPPPPP 732
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
PV + PP P P+P P P PPP R T L S
Sbjct: 583 PVASVMRMPPPVTP---PKPCTPLTSKKAPPPPPKRSDTTKLQS 623
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
PV + PP P P+P P P PPP R T L S
Sbjct: 600 PVASVMRMPPPVTP---PKPCTPLTSKKAPPPPPKRSDTTKLQS 640
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
PV + PP P P+P P P PPP R T L S
Sbjct: 712 PVASVMRMPPPVTP---PKPCTPLTSKKAPPPPPKRSDTTKLQS 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 0.69
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = -3
Query: 472 SMALPKFSRSPV*---LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATA---PSSIP 311
S ALP + P LP IT PP P P+ G PP P S
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGG 340
Query: 310 EPMNPDAKGSCPDPPPP 260
P P G CP PPPP
Sbjct: 341 PPPPPPPPGGCPPPPPP 357
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 254
PP P P P KG P PPPP M
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPPGM 375
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
GG + PP T P P P G P PPPP
Sbjct: 284 GGSSALPPITG-GPPPPPGLPPITGGPPPPPPP 315
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 379 PYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P ++CP +P AT P S P+P+ +C PPPP
Sbjct: 1431 PVSSCP-SSRFSSPSATRPQS-PDPVPAAPAENCDLPPPP 1468
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGS-CPDPPPP 260
PV EAKTPP P P A + P PPPP
Sbjct: 147 PVEDEAKTPPEKPKVEEPAPAPAPAPAAVAPAPPPP 182
>Z46241-2|CAA86315.1| 144|Caenorhabditis elegans Hypothetical
protein C38D4.1b protein.
Length = 144
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -3
Query: 421 TRTPPELYLCSCAIPYN-TCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATL 245
T T P + + + N T P G AK+P ATAP+ NP + P
Sbjct: 22 TTTTPNVPVSAATNTSNVTAPAGNSAKSPNATAPAG-----NPTKNVNVTAPAANTTQLA 76
Query: 244 LLSSCLLMVMTRCFGCSC-NCGYT 176
L+SS G C +C YT
Sbjct: 77 LVSSASPQTCKNGNGTHCPSCAYT 100
>Z46241-1|CAA86323.1| 462|Caenorhabditis elegans Hypothetical
protein C38D4.1a protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -3
Query: 421 TRTPPELYLCSCAIPYN-TCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATL 245
T T P + + + N T P G AK+P ATAP+ NP + P
Sbjct: 22 TTTTPNVPVSAATNTSNVTAPAGNSAKSPNATAPAG-----NPTKNVNVTAPAANTTQLA 76
Query: 244 LLSSCLLMVMTRCFGCSC-NCGYT 176
L+SS G C +C YT
Sbjct: 77 LVSSASPQTCKNGNGTHCPSCAYT 100
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 388 CAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
CA P CP P P P P CP PPPP
Sbjct: 38 CAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 355 GEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPP 260
G+ + PPA +P P P +P GS PPPP
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 259
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAK--GSCPDPPPPR 257
P G PP +P P +P GS P PPPPR
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -3
Query: 379 PYNTCPVGGEAKTPPATAPSSIPEPMN----PDAKGSCPDPP 266
P + P+ G PP A S P P P GS P PP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDP-----PPP 260
P GG P A +P P P GS P P PPP
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 355 GEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPP 260
G+ + PPA +P P P +P GS PPPP
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 280
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAK--GSCPDPPPPR 257
P G PP +P P +P GS P PPPPR
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -3
Query: 379 PYNTCPVGGEAKTPPATAPSSIPEPMN----PDAKGSCPDPP 266
P + P+ G PP A S P P P GS P PP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDP-----PPP 260
P GG P A +P P P GS P P PPP
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 355 GEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPP 260
G+ + PPA +P P P +P GS PPPP
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 265
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAK--GSCPDPPPPR 257
P G PP +P P +P GS P PPPPR
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -3
Query: 379 PYNTCPVGGEAKTPPATAPSSIPEPMN----PDAKGSCPDPP 266
P + P+ G PP A S P P P GS P PP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDP-----PPP 260
P GG P A +P P P GS P P PPP
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 29.9 bits (64), Expect = 1.6
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Frame = -3
Query: 535 LEATSSPTIRPSTLI-PAILAFSMALPKF---SRSPV*LPMITRTPPELYLCSCAIPYNT 368
+ +T S T S I PA + M P + + +P P +R PP Y S P NT
Sbjct: 172 ISSTPSTTTEESIRIHPAGYRYDMPTPAYHMNNNAPQYSPGYSRPPPPAYDSS---PVNT 228
Query: 367 --CPVGGEA-KT-------PPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 233
PV + +T P AP P +N + K P PPPP +T+ + +
Sbjct: 229 RMTPVATDNYRTHLHMKVHPVVKAPPPNPTMLNHN-KNMAPPPPPPAKSTISIET 282
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Frame = -3
Query: 556 RPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIP 377
+P V+ T PT P T + + + + +PV P T TPP +
Sbjct: 454 KPTVVLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPV--PTTTNTPPANPTTATPTT 511
Query: 376 YNTC---PVGGEAKTPPATAP------SSIPE-PMNPDAKGSCPDPPPPRMAT 248
T P T P TAP ++ P P+NP + + P PP T
Sbjct: 512 VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTT 564
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 349 AKTPPATAPSSIPEPMNPDAKGSCPDPPP-PRMAT 248
A PP+ P+ P P + S P PPP P +AT
Sbjct: 466 APPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIAT 500
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 349 AKTPPATAPSSIPEPMNPDAKGSCPDPPP-PRMAT 248
A PP+ P+ P P + S P PPP P +AT
Sbjct: 473 APPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIAT 507
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 254
PP PSS+P P P P PPPP +
Sbjct: 503 PPIATPSSVPPPPPP------PPPPPPAL 525
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = -3
Query: 337 PATAPSSIPEPMNPD----AKGSCPDPPPPRMATLL 242
P PS +P P P A CP PPPP + L+
Sbjct: 98 PCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLV 133
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P G + P ++ P P P G P+PPPP
Sbjct: 472 PPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPP 506
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPP 260
P P P P P + G P PPPP
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPP 302
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPP 260
PP + + +P PM P G P PPPP
Sbjct: 265 PPPPSVTPMPPPM-PPTPGMTPRPPPP 290
Score = 28.3 bits (60), Expect = 4.8
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = -3
Query: 529 ATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVG-G 353
AT P +P L+ +A S ++ P P +T PP + P P G
Sbjct: 237 ATGRPGYQPPPLMG--MAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 294
Query: 352 EAKTPPATAPSSIPEPMNPDAKGSCPDPPPPR 257
PP P P P P G P PPP R
Sbjct: 295 MWPPPPPPPPGRTPGP--PGMPGMPPPPPPSR 324
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 337 PATAPSSIPEPMNPDAKGSCPDPPPPRM 254
P P P P G P PPPP M
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P G PP PS P P P G P PPPP
Sbjct: 356 PSAGPGMYPPPP-PSRPPAP--PSGHGMIPPPPPP 387
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 352 EAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
+AK P ATAP I ++ ++K + P PPPP
Sbjct: 27 KAKKPKATAPKPI-SSISSNSKVAPPAPPPP 56
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 261 GGGGSGHEPFASGFIGSG--MLDGAVAGGVFASPPTG 365
GGGG G GF G G G+ GG SPP+G
Sbjct: 483 GGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSG 519
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPP 260
P P P P P + G P PPPP
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPP 312
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 340 PPATAPSSIPEPMNPDAKGSCPDPPPP 260
PP + + +P PM P G P PPPP
Sbjct: 275 PPPPSVTPMPPPM-PPTPGMTPRPPPP 300
Score = 28.3 bits (60), Expect = 4.8
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = -3
Query: 529 ATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVG-G 353
AT P +P L+ +A S ++ P P +T PP + P P G
Sbjct: 247 ATGRPGYQPPPLMG--MAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 304
Query: 352 EAKTPPATAPSSIPEPMNPDAKGSCPDPPPPR 257
PP P P P P G P PPP R
Sbjct: 305 MWPPPPPPPPGRTPGP--PGMPGMPPPPPPSR 334
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 337 PATAPSSIPEPMNPDAKGSCPDPPPPRM 254
P P P P G P PPPP M
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P G PP PS P P P G P PPPP
Sbjct: 366 PSAGPGMYPPPP-PSRPPAP--PSGHGMIPPPPPP 397
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Frame = -3
Query: 550 PVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCS-CAIPY 374
PV + P P P I + +P P+ +P+ P +Y + CA+P
Sbjct: 131 PVYEPYACAAPPCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVPP 190
Query: 373 NTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCP 275
P PA P + P A+ CP
Sbjct: 191 CPAPAATPVYAQPAPRPMPVYAPAPACAQPPCP 223
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Frame = -3
Query: 445 SPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSS-IPEPMNPDAKGSCPDP 269
+P P + + PP+ PV + + P T+PS+ + P P K S DP
Sbjct: 403 APQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQDP 462
Query: 268 -----PPPR 257
PPP+
Sbjct: 463 IVQQDPPPK 471
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 261 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTG 365
GGGG P G G G G+ GG +AS P+G
Sbjct: 198 GGGGYAVAPSGGGGCGGG---GSSGGGGYASAPSG 229
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 261 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTG 365
GGGG P G G G G+ GG +AS P+G
Sbjct: 198 GGGGYAVAPSGGGGCGGG---GSSGGGGYASAPSG 229
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 376 YNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
Y+T P+ + K P PS P NP+ P+ P
Sbjct: 490 YDTAPLNEDRKDVPTAEPSHNVAPSNPEPVAVIPEETAP 528
>U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical
protein F26A10.2 protein.
Length = 620
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 TAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSSCLLMVMTRCFGCSC-NCG 182
T P I +PM K + P PPPP + + + + + C C +CG
Sbjct: 4 TPPIGIEDPMGIQQKANEPPPPPPIVICPTEVDHINVTLEKNQQCECKDCG 54
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 349 AKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
A P A APS+ P P G P PPPP
Sbjct: 992 ASAPSAAAPSA---PKAPAGPGGPPPPPPP 1018
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 349 AKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
A P A APS+ P P G P PPPP
Sbjct: 231 ASAPSAAAPSA---PKAPAGPGGPPPPPPP 257
>Z81098-1|CAB03183.1| 581|Caenorhabditis elegans Hypothetical
protein K07A12.1 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 241 VREWPSLVVEDRDTNPLHQDS*VRECSM 324
+R +PS+VV+ D +H DS V C M
Sbjct: 332 IRHFPSVVVQLMDILQIHPDSAVMNCKM 359
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNP-DAKGSCPDPPP 263
GG+ K PP + S + P P A + PD PP
Sbjct: 24 GGKKKAPPPKSASKMTAPTAPAPAPPAAPDAPP 56
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 394 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
C + P P GG + A + P P P G+ P PPPP
Sbjct: 29 CQPSQPACANPCGGASAAAYAAPAAGYPRP--PIGYGAPPPPPPP 71
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 394 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
C + P P GG + A + P P P G+ P PPPP
Sbjct: 29 CQPSQPACANPCGGASAAAYAAPAAGYPRP--PIGYGAPPPPPPP 71
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 394 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
C + P P GG + A + P P P G+ P PPPP
Sbjct: 29 CQPSQPACANPCGGASAAAYAAPAAGYPRP--PIGYGAPPPPPPP 71
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 273 SGHEPFASGFIGSGMLDGAVAGGVFASP 356
SG E F S +G G VAGGV A+P
Sbjct: 5923 SGGEGFGSKVLGFAKKAGMVAGGVVAAP 5950
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 273 SGHEPFASGFIGSGMLDGAVAGGVFASP 356
SG E F S +G G VAGGV A+P
Sbjct: 5923 SGGEGFGSKVLGFAKKAGMVAGGVVAAP 5950
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 361 VGGEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPPR 257
VG ++PP P P P+ NP AK + P PPPP+
Sbjct: 66 VGRPTESPPLPPP---PLPLSNPPAKPT-PPPPPPK 97
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 361 VGGEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPPR 257
VG ++PP P P P+ NP AK + P PPPP+
Sbjct: 288 VGRPTESPPLPPP---PLPLSNPPAKPT-PPPPPPK 319
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 258 LGGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGIAQLH 395
LGGG G F F+ G +D + GG+ GH A LH
Sbjct: 119 LGGGAGGPNMF---FMNQGGMDDGMFGGMHQGGRRGHARQDPAVLH 161
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 364 PVGGEAKTPPATAPSSIPEPMNP---DAKGSCPDPPPPRMA 251
P GG + P+T+P+SI P NP A G+ P P A
Sbjct: 28 PDGGSSAPAPSTSPNSI-SPSNPTGTPAPGASAQTPNPNAA 67
>U64836-8|AAG24063.1| 339|Caenorhabditis elegans Serpentine
receptor, class h protein187 protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 554 PACFVLA*SHILSHDKTFHLNSCYFSFLDGLAEV*PIACVI 432
P+ F +L+ D T+H +C+F F EV C I
Sbjct: 179 PSNFYKVSMFVLAEDYTYHFWACFFIFSTTSTEVFTFVCFI 219
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = -3
Query: 364 PVGGEAKTP-PATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSSCLLMVMTRCFGCSCN 188
P+ P P P +P PM P P P + + S C+ + M+ C C
Sbjct: 8 PIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQSNCCSCCMPVCMSVCMRGGCG 67
Query: 187 CG 182
G
Sbjct: 68 YG 69
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 409 PELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
P Y+ A P T P A P P+ P P P + + P P PP
Sbjct: 35 PAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPA-PYPQHAVPAPAPP 83
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 358 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
GG A PA AP P PM A P PPPP
Sbjct: 30 GGCAPAAPACAPP--PPPMCGCAPPPPPPPPPP 60
>AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical
protein C36C9.1 protein.
Length = 832
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 352 EAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLL 242
EA + PA P P ++ + P PPPR++ L
Sbjct: 629 EATSQPAPLPCKSANPTEDSSQDAPPTSPPPRISDSL 665
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 349 AKTPPATAPSSIPEPMNPDAKGSCPDPPPP 260
A TPP PS+ P + P G+ PPPP
Sbjct: 87 ASTPPTPPPSTFPT-LPPLTFGTPSTPPPP 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,023,569
Number of Sequences: 27780
Number of extensions: 382973
Number of successful extensions: 2127
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2017
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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