Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8l17
         (633 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124561-1|BAC85886.1|  173|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AB086378-1|BAC67705.1|  477|Homo sapiens CDC20-like protein form...    30   7.8  
AB077043-1|BAC67701.1|  519|Homo sapiens G6VTS76519 protein.           30   7.8  

>AK124561-1|BAC85886.1|  173|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42570 fis, clone BRACE3007767. ).
          Length = 173

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 1   GLLTPSIPMYCSFTLTLFTYNISRRCCW 84
           GLL P+ P  C  T TL + N   RC W
Sbjct: 115 GLLRPASPSQCIVTTTLLSSNKQVRCRW 142


>AB086378-1|BAC67705.1|  477|Homo sapiens CDC20-like protein form 3
           protein.
          Length = 477

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = +3

Query: 273 WLPSPMDFSNAKGRAKPLPTVKCCPQASFEEGYVISLGKHRGG--ELIPKPDGTW 431
           WLP   + +  +G  K   TV  CP  S   G+      HRG    L   PD TW
Sbjct: 411 WLPKTKEIATGQGTPKNDVTVWTCPTVSRSGGFF----GHRGRVLHLALSPDQTW 461


>AB077043-1|BAC67701.1|  519|Homo sapiens G6VTS76519 protein.
          Length = 519

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = +3

Query: 273 WLPSPMDFSNAKGRAKPLPTVKCCPQASFEEGYVISLGKHRGG--ELIPKPDGTW 431
           WLP   + +  +G  K   TV  CP  S   G+      HRG    L   PD TW
Sbjct: 453 WLPKTKEIATGQGTPKNDVTVWTCPTVSRSGGFF----GHRGRVLHLALSPDQTW 503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,742,228
Number of Sequences: 237096
Number of extensions: 2190524
Number of successful extensions: 4865
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4864
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)