Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8l14
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-3|AAK21382.1|   73|Caenorhabditis elegans Ubiquitin-like ...   138   1e-33
U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm recept...    37   0.005
AF003130-1|AAB54124.2|  423|Caenorhabditis elegans Hypothetical ...    29   0.91 
Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AF038604-6|AAB92014.2|  243|Caenorhabditis elegans Hypothetical ...    27   3.7  
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    27   4.9  
U80452-10|AAB37853.1|  214|Caenorhabditis elegans Hypothetical p...    27   6.4  
U80847-4|AAB37986.1|  112|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine r...    26   8.5  
AC024831-6|AAY86308.1|  351|Caenorhabditis elegans Hypothetical ...    26   8.5  

>U88173-3|AAK21382.1|   73|Caenorhabditis elegans Ubiquitin-like
           family protein 5 protein.
          Length = 73

 Score =  138 bits (334), Expect = 1e-33
 Identities = 58/73 (79%), Positives = 67/73 (91%)
 Frame = +2

Query: 146 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 325
           M+E+T NDRLGKKVR+KCNP DT+GDLKKLIAAQTGTR++KIVLKKWYT++KDHI L DY
Sbjct: 1   MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGTRWEKIVLKKWYTIYKDHITLMDY 60

Query: 326 EIHDGMNLELYYQ 364
           EIH+G N ELYYQ
Sbjct: 61  EIHEGFNFELYYQ 73


>U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm receptor
           protein 136 protein.
          Length = 347

 Score = 37.1 bits (82), Expect = 0.005
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 167 HCMLLQAFCSQISSQFYYE-IKYINSNFLFVLVVLPPFKIFTAVLIVFIIYHVFFF 3
           HC+L     S +S QF+Y  +    ++ L  L     F IFT  +IVFII+ + F+
Sbjct: 99  HCVLTGFVASLLSCQFFYRYVALCKTHLLVYLQGKKLFLIFTPSVIVFIIWFIMFY 154


>AF003130-1|AAB54124.2|  423|Caenorhabditis elegans Hypothetical
           protein F55A12.6 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -1

Query: 269 FCRI*CQFVRLLTSLNHPRYRQGCI*LEPSYRVDHCMLLQAFCSQISSQFYYEIKYINSN 90
           +CR+  QFV  + S   PRY   C    P+Y+ + C  + A      S F ++ K   ++
Sbjct: 195 YCRV-AQFVDYVGST--PRYYCDCPPYAPNYQWNQCSPMSARALSPMSVFSHKPKLSRNS 251

Query: 89  FLFVL 75
           F F L
Sbjct: 252 FFFQL 256


>Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical
           protein F35E2.1 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -1

Query: 188 EPSYRVDHCMLLQAFCSQISSQFYYEIKYINSNFLFVLVVL----PPFKIFTAVLIVFII 21
           +P Y V  C  L+ FCS  +S  Y  + +  S + + +VVL     P+ +    +IV  I
Sbjct: 109 QPVYTVFVCSFLKNFCSSTTSA-YQVLPFAVSLYRYRIVVLKGHPSPWFVINVHIIVTTI 167

Query: 20  YHVFFF 3
           + ++ F
Sbjct: 168 FIIYAF 173


>Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical
           protein F16D3.6 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -1

Query: 188 EPSYRVDHCMLLQAFCSQISSQFYYEIKYINSNFLFVLVVL----PPFKIFTAVLIVFII 21
           +P Y V  C  L+ FCS  +S  Y  + +  S + +  VVL     P+ +    +IV  I
Sbjct: 109 QPVYTVFVCSFLKNFCSSTTSA-YQVLPFAVSLYRYRTVVLKGHPSPWFVINVHIIVTTI 167

Query: 20  YHVFFF 3
           + ++ F
Sbjct: 168 FIIYAF 173


>AF038604-6|AAB92014.2|  243|Caenorhabditis elegans Hypothetical
           protein B0546.5 protein.
          Length = 243

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -1

Query: 188 EPSYRVDHCMLLQAFCSQISSQFYYEIKYINSNFLFVLVVL----PPFKIFTAVLIVFII 21
           +P Y V  C  L+ FCS  +S  Y  + +  S + +  VVL     P+ +    +IV  I
Sbjct: 109 QPVYTVFVCSFLKNFCSSTTSA-YQVLPFAVSLYRYRTVVLKGHPSPWFVINVHIIVTTI 167

Query: 20  YHVFFF 3
           + ++ F
Sbjct: 168 FIIYAF 173


>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 113  HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 220
            H +T+  FES + E      L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 113  HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 220
            H +T+  FES + E      L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 113  HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 220
            H +T+  FES + E      L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 113  HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 220
            H +T+  FES + E      L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035


>U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical
           protein C16C8.4 protein.
          Length = 226

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 16/64 (25%), Positives = 26/64 (40%)
 Frame = +2

Query: 173 LGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYEIHDGMNLE 352
           LG     K + +DTV D+K  I  +         L       +DH  + DY I     + 
Sbjct: 161 LGVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTIT 220

Query: 353 LYYQ 364
           +Y++
Sbjct: 221 MYFR 224


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
            precursor protein.
          Length = 5198

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 113  HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 220
            H +T+  FES + E      L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035


>U80452-10|AAB37853.1|  214|Caenorhabditis elegans Hypothetical
           protein C16C8.11 protein.
          Length = 214

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 176 GKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYE 328
           G+   +  N  ++V  LK  I  QTG    K  L+       D  KLADY+
Sbjct: 152 GRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADYK 202


>U80847-4|AAB37986.1|  112|Caenorhabditis elegans Hypothetical
           protein C17H11.5 protein.
          Length = 112

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 203 PDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYEIHDGMNLELY 358
           P++  G + +   A    RYD + +K W       I +A  +++D M  E Y
Sbjct: 26  PENDDGAIIEFSVAMETCRYDYMTIKYWLDY--QRISIAAMKVYDRMKREKY 75


>AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine
           receptor, class t protein23 protein.
          Length = 356

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = -2

Query: 325 IVCKFNMILEYCVPFLEYYFVVSSASLCGY*LL*ITHGIVRVAF 194
           ++C FN I  Y   ++++++   +  L G       HG V + +
Sbjct: 255 LICSFNAIAAYIYVYMQFFYSPPAVVLVGQLAWQCAHGSVCIVY 298


>AC024831-6|AAY86308.1|  351|Caenorhabditis elegans Hypothetical
           protein Y55F3C.10 protein.
          Length = 351

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = -2

Query: 325 IVCKFNMILEYCVPFLEYYFVVSSASLCGY*LL*ITHGIVRVAF 194
           ++C FN I  Y   ++++++   +  L G       HG V + +
Sbjct: 251 LICSFNAIAAYIYVYMQFFYSPPAVVLIGQLAWQCAHGSVCIVY 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,965,210
Number of Sequences: 27780
Number of extensions: 124807
Number of successful extensions: 449
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)