Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8l09
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 40 0.007
AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens ... 39 0.012
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 37 0.050
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 35 0.20
BC117223-1|AAI17224.1| 907|Homo sapiens zinc finger protein 228... 33 1.1
BC101753-1|AAI01754.1| 907|Homo sapiens zinc finger protein 228... 33 1.1
AF198358-1|AAF12816.1| 913|Homo sapiens zinc finger protein ZNF... 33 1.1
AC084239-2|AAG23968.1| 913|Homo sapiens ZNF228 protein protein. 33 1.1
AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein. 32 1.4
AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein. 32 1.4
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 32 1.4
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 32 1.4
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.3
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.3
BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for IM... 31 3.3
BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for IM... 31 3.3
BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein. 31 3.3
AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-... 31 3.3
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 3.3
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.3
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 3.3
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.3
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens ... 30 5.7
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 29 9.9
U89012-1|AAC51332.1| 513|Homo sapiens dentin matrix acidic phos... 29 9.9
U65378-1|AAB87728.1| 497|Homo sapiens dentin matrix protein 1 p... 29 9.9
BC132865-1|AAI32866.1| 513|Homo sapiens dentin matrix acidic ph... 29 9.9
BC130581-1|AAI30582.1| 513|Homo sapiens dentin matrix acidic ph... 29 9.9
BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein. 29 9.9
BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone recepto... 29 9.9
BC033776-1|AAH33776.1| 975|Homo sapiens importin 11 protein. 29 9.9
BC031694-1|AAH31694.1| 725|Homo sapiens Unknown (protein for IM... 29 9.9
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 29 9.9
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 29 9.9
AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein. 29 9.9
AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein. 29 9.9
AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone recepto... 29 9.9
AK096436-1|BAC04789.1| 439|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK001696-1|BAA91843.1| 975|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone recepto... 29 9.9
AF111109-1|AAF21936.1| 975|Homo sapiens Ran binding protein 11 ... 29 9.9
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 39.9 bits (89), Expect = 0.007
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIG-NGANHIRS 439
H HI T H T+THI T H ++ T W +H T HI+ H + HI +
Sbjct: 312 HAHAHIHINTYMHTYTYTHIRTYTHIQMHTLTWTHIHTHTHIHIYVYTHTHMHTPTHIYA 371
Query: 438 HK 433
H+
Sbjct: 372 HR 373
Score = 39.5 bits (88), Expect = 0.009
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHI 466
HI T +H LT TH+ T T+ T I TH+ H T AHI HI
Sbjct: 74 HICTHAHTLTYTHIHTCTYKRTYIQGHIHTHMHTYTHAHTHAHIHIHVHI 123
Score = 38.3 bits (85), Expect = 0.021
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGANHIRSH 436
H+ + +HI T TH H+ T H TH +H T H +T HI HI+ H
Sbjct: 282 HMHSHAHINTHTHAHIHMHMHTHTHTHTYTHAHAHIHINTYMHTYTYTHI-RTYTHIQMH 340
Query: 435 K-TW 427
TW
Sbjct: 341 TLTW 344
Score = 37.1 bits (82), Expect = 0.050
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWT----HILT*GHFRI*THIWYLVHFRT--RAHIWTRPHIG-NG 457
HI +H +H+ TWT H T H + THI +H T H+ T PH +
Sbjct: 220 HIYMHAHTPIHSHIHTWTHTHAHTYTHAHIHVCTHIHMHIHTYTHMHTHMDTYPHTHIHT 279
Query: 456 ANHIRSHKTWRRH 418
H+ SH H
Sbjct: 280 CTHMHSHAHINTH 292
Score = 36.3 bits (80), Expect = 0.087
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = -3
Query: 600 SHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGANHIRSH 436
+H LT T + +THI H I +HI H T AH +T HI + HI H
Sbjct: 207 THTLTCTQIHIYTHIYMHAHTPIHSHIHTWTH--THAHTYTHAHI-HVCTHIHMH 258
Score = 34.3 bits (75), Expect = 0.35
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 582 THVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWT 478
TH+ T+TH T H I HI +H T HI+T
Sbjct: 103 THMHTYTHAHTHAHIHIHVHIHMNIHTHTCTHIYT 137
Score = 34.3 bits (75), Expect = 0.35
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -3
Query: 606 TRSHILTGTHVRTWTHI----LT*GHFRI*THIWYLVHFRTRAHI--WTRPH 469
T HI TH RT+TH+ LT I THI+ H +HI WT H
Sbjct: 189 THIHIHMPTHTRTYTHMHTHTLTCTQIHIYTHIYMHAHTPIHSHIHTWTHTH 240
Score = 33.5 bits (73), Expect = 0.61
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRT--RAHIWTRPHIGNGAN-HI 445
+I T HI + H THI T H THI + RT + HI T H A+ H
Sbjct: 56 YIYTHMHIHSHAHRHIHTHICTHAHTLTYTHIHTCTYKRTYIQGHIHTHMHTYTHAHTHA 115
Query: 444 RSHKTWRRHWAWSIWACIHI 385
H H C HI
Sbjct: 116 HIHIHVHIHMNIHTHTCTHI 135
Score = 33.1 bits (72), Expect = 0.81
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGANHIRSH 436
HI T +H+ + H+ T TH H TH H HI T H HIR++
Sbjct: 276 HIHTCTHMHSHAHINTHTHAHIHMHMHTHTHTHTYTHAHAHIHINTYMHTYT-YTHIRTY 334
Query: 435 KTWRRHWAWSIWACIH 388
+ H W IH
Sbjct: 335 THIQMHTL--TWTHIH 348
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPH 469
H+ T TH+ T TH+ + H TH +H T H T H
Sbjct: 264 HMHTHMDTYPHTHIHTCTHMHSHAHINTHTHAHIHMHMHTHTHTHTYTH 312
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGAN-HIRS 439
HI HI H T THI T + + TH +H T H T HI + + HI +
Sbjct: 116 HIHIHVHIHMNIHTHTCTHIYTCTYTVVCTHTH--MHIYTHMHTHTCIHIHSDTHLHIYT 173
Query: 438 H 436
H
Sbjct: 174 H 174
Score = 30.7 bits (66), Expect = 4.3
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = -3
Query: 615 HILTR--SHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGANHIR 442
H+ T HI T TH+ TH+ T H THI H + AHI T H H+
Sbjct: 250 HVCTHIHMHIHTYTHMH--THMDTYPH----THIHTCTHMHSHAHINTHTH---AHIHMH 300
Query: 441 SHKTWRRHWAWSIWACIHISLF 376
H H A IHI+ +
Sbjct: 301 MHTHTHTHTYTHAHAHIHINTY 322
>AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ46204 fis, clone TESTI4009501. ).
Length = 225
Score = 39.1 bits (87), Expect = 0.012
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = -3
Query: 606 TRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGANHIRSHKT 430
T H TG H T TH+ T H ++ T I L H T AH H G H R+H T
Sbjct: 82 THMHTHTGMHTLTGTHVHT-PHTQMHTRILTLSHMHTHAHTHAHTH---GHTHTRAHST 136
Score = 37.9 bits (84), Expect = 0.028
Identities = 25/65 (38%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Frame = -3
Query: 615 HILTRSHILTGTHVRT-----WTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGAN 451
H T H LTGTHV T T ILT H H H T H TR H +
Sbjct: 85 HTHTGMHTLTGTHVHTPHTQMHTRILTLSHMHTHAH----THAHTHGHTHTRAHSTHAHT 140
Query: 450 HIRSH 436
H SH
Sbjct: 141 HAHSH 145
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 37.1 bits (82), Expect = 0.050
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*TH-IWYL---VHFRTRAHIWTRPHI 466
HI T +H T H+RT H T H + TH + Y +H T+ HI+T+ HI
Sbjct: 4 HIHTCTHTHTHAHIRTCIHTCTDTHTHMHTHTLTYTHIHMHTHTQTHIYTQAHI 57
Score = 34.7 bits (76), Expect = 0.26
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT--*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGANHIR 442
HI T +H LT TH+ T T+ T GH H + T HI HI + HI
Sbjct: 80 HICTHAHTLTYTHIHTCTYKRTYIQGHIHTHMHTYTCTCTHTHKHIHAHIHI-HTHTHIY 138
Query: 441 SH 436
+H
Sbjct: 139 TH 140
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWT----RPHI-GNGAN 451
HI T++HI + T + +T+ T + THI H T HI T R +I G+
Sbjct: 50 HIYTQAHIHSCTQINIYTYAYTLTCTQTHTHICTHAHTLTYTHIHTCTYKRTYIQGHIHT 109
Query: 450 HIRSHKTWRRHWAWSIWACIHI 385
H+ ++ H I A IHI
Sbjct: 110 HMHTYTCTCTHTHKHIHAHIHI 131
Score = 31.1 bits (67), Expect = 3.3
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWT 478
HI T +HI T H +TH+ T H THI +H T AH +T
Sbjct: 130 HIHTHTHIYT--HTDAYTHMDTYTHTYPHTHI--CIHSHTHAHTYT 171
Score = 29.9 bits (64), Expect = 7.5
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -3
Query: 615 HILTRSHIL----TGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPH 469
H LT +HI T TH+ T HI + I T+ + L +T HI T H
Sbjct: 34 HTLTYTHIHMHTHTQTHIYTQAHIHSCTQINIYTYAYTLTCTQTHTHICTHAH 86
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 35.1 bits (77), Expect = 0.20
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGN 460
H +H LT T T TH LT H I TH+ H T T PH N
Sbjct: 154 HTYPITHPLTHTPTHTHTHALTHSHTHIHTHMHSHTHPLTHTSTHTHPHTHN 205
Score = 34.3 bits (75), Expect = 0.35
Identities = 23/69 (33%), Positives = 26/69 (37%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGANHIRSH 436
H T +H LT TH TH LT H TH L H T H H + H +H
Sbjct: 142 HTSTHTHPLTFTHTYPITHPLT--HTPTHTHTHALTHSHTHIHTHMHSHT-HPLTHTSTH 198
Query: 435 KTWRRHWAW 409
H W
Sbjct: 199 THPHTHNVW 207
Score = 33.5 bits (73), Expect = 0.61
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPH 469
H L+ +H LT TH+ + TH LT H T+ L H T H H
Sbjct: 15 HPLSHTHPLTLTHIHSHTHPLTHSHPLSHTYPLTLTHIHTHPHTHISTH 63
Score = 33.1 bits (72), Expect = 0.81
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 609 LTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFR--TRAHIWTRPHIGNG-ANHIRS 439
+T +H+LT H ++TH H I +H +H T H T HI H S
Sbjct: 72 ITHTHLLTHIHSHSFTHAHMHSHTHIHSHTHSHIHSNTPTHTHPLTSTHIQTSTVTHTHS 131
Query: 438 HKTWRRH 418
H +H
Sbjct: 132 HTHAHKH 138
Score = 32.7 bits (71), Expect = 1.1
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHI-GNGANHIRS 439
H +HI T TH T THI H + THI H T AH+ + HI + +HI S
Sbjct: 53 HTHPHTHISTHTHPLTVTHIT---HTHLLTHIH--SHSFTHAHMHSHTHIHSHTHSHIHS 107
Query: 438 HKTWRRH 418
+ H
Sbjct: 108 NTPTHTH 114
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -3
Query: 609 LTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPH-IGNGANHIRSHK 433
+T +H T H T+TH T H TH + + H T T H + + HI +H
Sbjct: 126 VTHTHSHTHAHKHTYTHTSTHTHPLTFTHTYPITHPLTHTPTHTHTHALTHSHTHIHTHM 185
Query: 432 TWRRH 418
H
Sbjct: 186 HSHTH 190
>BC117223-1|AAI17224.1| 907|Homo sapiens zinc finger protein 228
protein.
Length = 907
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -3
Query: 471 HIGNGANHIRS--HKTWRRHWAW 409
HIGNG+N+I+S + +WR H +W
Sbjct: 155 HIGNGSNYIKSQGYPSWRAHHSW 177
>BC101753-1|AAI01754.1| 907|Homo sapiens zinc finger protein 228
protein.
Length = 907
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -3
Query: 471 HIGNGANHIRS--HKTWRRHWAW 409
HIGNG+N+I+S + +WR H +W
Sbjct: 155 HIGNGSNYIKSQGYPSWRAHHSW 177
>AF198358-1|AAF12816.1| 913|Homo sapiens zinc finger protein ZNF228
protein.
Length = 913
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -3
Query: 471 HIGNGANHIRS--HKTWRRHWAW 409
HIGNG+N+I+S + +WR H +W
Sbjct: 161 HIGNGSNYIKSQGYPSWRAHHSW 183
>AC084239-2|AAG23968.1| 913|Homo sapiens ZNF228 protein protein.
Length = 913
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -3
Query: 471 HIGNGANHIRS--HKTWRRHWAW 409
HIGNG+N+I+S + +WR H +W
Sbjct: 161 HIGNGSNYIKSQGYPSWRAHHSW 183
>AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein.
Length = 614
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 234
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 563 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 607
>AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein.
Length = 583
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 234
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 532 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 576
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 234
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 1290 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 1334
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 234
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 1235 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 1279
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for
IMAGE:4122390) protein.
Length = 465
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for
IMAGE:3538108) protein.
Length = 474
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein.
Length = 465
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-27
protein.
Length = 148
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 9 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 45
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 296 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 332
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 296 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 332
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 207
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ32873 fis, clone TESTI2003998, weakly similar to
T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 170
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = -3
Query: 615 HILTRSHILTGTHVRTWTHILT*GHFRI*THIWYLVHFRTRAHIWTRPHIGNGAN 451
H T H T H +TWT+ T H TH+ +TR + H N
Sbjct: 80 HTDTDMHSHTHAHTQTWTYTCTHTHTHAVTHVHMHAGTQTRTYTTLHKHAHTDTN 134
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 109 KQDEDNSDSNTQRRHSGDRGREKYRRWTDRG-RNRAQ 216
KQ+ D + + +R HS R R++ RR R RNR Q
Sbjct: 15 KQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQ 51
>U89012-1|AAC51332.1| 513|Homo sapiens dentin matrix acidic
phosphoprotein 1 protein.
Length = 513
Score = 29.5 bits (63), Expect = 9.9
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 TEAVKKPEKQDEDNSDSNTQRRHSGDRGREKYR--RWTDRGRNRAQSPITPVVVRRESVD 258
T V+ E D DS+ HS RE+ ++ +SP +P S +
Sbjct: 372 TSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQE 431
Query: 259 NI--NTNSIPSLMQFPVRQPKDSEEQDNWKSKTDG---DSDSNSEQ 381
+ +++S S + + DS+ QD+ +SK D +S S+SE+
Sbjct: 432 GLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEE 477
>U65378-1|AAB87728.1| 497|Homo sapiens dentin matrix protein 1
protein.
Length = 497
Score = 29.5 bits (63), Expect = 9.9
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 TEAVKKPEKQDEDNSDSNTQRRHSGDRGREKYR--RWTDRGRNRAQSPITPVVVRRESVD 258
T V+ E D DS+ HS RE+ ++ +SP +P S +
Sbjct: 356 TSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQE 415
Query: 259 NI--NTNSIPSLMQFPVRQPKDSEEQDNWKSKTDG---DSDSNSEQ 381
+ +++S S + + DS+ QD+ +SK D +S S+SE+
Sbjct: 416 GLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEE 461
>BC132865-1|AAI32866.1| 513|Homo sapiens dentin matrix acidic
phosphoprotein protein.
Length = 513
Score = 29.5 bits (63), Expect = 9.9
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 TEAVKKPEKQDEDNSDSNTQRRHSGDRGREKYR--RWTDRGRNRAQSPITPVVVRRESVD 258
T V+ E D DS+ HS RE+ ++ +SP +P S +
Sbjct: 372 TSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQE 431
Query: 259 NI--NTNSIPSLMQFPVRQPKDSEEQDNWKSKTDG---DSDSNSEQ 381
+ +++S S + + DS+ QD+ +SK D +S S+SE+
Sbjct: 432 GLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEE 477
>BC130581-1|AAI30582.1| 513|Homo sapiens dentin matrix acidic
phosphoprotein protein.
Length = 513
Score = 29.5 bits (63), Expect = 9.9
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 TEAVKKPEKQDEDNSDSNTQRRHSGDRGREKYR--RWTDRGRNRAQSPITPVVVRRESVD 258
T V+ E D DS+ HS RE+ ++ +SP +P S +
Sbjct: 372 TSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQE 431
Query: 259 NI--NTNSIPSLMQFPVRQPKDSEEQDNWKSKTDG---DSDSNSEQ 381
+ +++S S + + DS+ QD+ +SK D +S S+SE+
Sbjct: 432 GLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEE 477
>BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein.
Length = 955
Score = 29.5 bits (63), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 100 KPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQS 219
+ + S T++ H G + ++K+RR DR R+ + S
Sbjct: 744 RDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSS 783
>BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 29.5 bits (63), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 100 KPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQS 219
+ + S T++ H G + ++K+RR DR R+ + S
Sbjct: 744 RDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSS 783
>BC033776-1|AAH33776.1| 975|Homo sapiens importin 11 protein.
Length = 975
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 269 PTLYHPLCNFLSDNPKILRNRTTGSLKL 352
P LY +CN L D ++R T +LKL
Sbjct: 514 PMLYEAICNLLQDQDLVVRIETATTLKL 541
>BC031694-1|AAH31694.1| 725|Homo sapiens Unknown (protein for
IMAGE:5116230) protein.
Length = 725
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 269 PTLYHPLCNFLSDNPKILRNRTTGSLKL 352
P LY +CN L D ++R T +LKL
Sbjct: 264 PMLYEAICNLLQDQDLVVRIETATTLKL 291
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 109 KQDEDNSDSNTQRRHSGDRGREKYRRWTDRG-RNRAQ 216
KQ+ D + + +R HS R R++ RR R RNR Q
Sbjct: 15 KQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQ 51
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 109 KQDEDNSDSNTQRRHSGDRGREKYRRWTDRG-RNRAQ 216
KQ+ D + + +R HS R R++ RR R RNR Q
Sbjct: 15 KQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQ 51
>AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S YG S+ YG G S YG G S G G
Sbjct: 422 GQGSHYGQTDRQGQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQG 470
>AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S YG S+ YG G S YG G S G G
Sbjct: 422 GQGSHYGQTDRQGQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQG 470
>AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 29.5 bits (63), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 100 KPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQS 219
+ + S T++ H G + ++K+RR DR R+ + S
Sbjct: 744 RDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSS 783
>AK096436-1|BAC04789.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ39117 fis, clone NTONG2006440, moderately
similar to REPETIN. ).
Length = 439
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S YG S+ YG G S YG G S G G
Sbjct: 77 GQGSHYGQTDRQGQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQG 125
>AK001696-1|BAA91843.1| 975|Homo sapiens protein ( Homo sapiens
cDNA FLJ10834 fis, clone NT2RP4001207. ).
Length = 975
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 269 PTLYHPLCNFLSDNPKILRNRTTGSLKL 352
P LY +CN L D ++R T +LKL
Sbjct: 514 PMLYEAICNLLQDQDLVVRIETATTLKL 541
>AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP150
protein.
Length = 955
Score = 29.5 bits (63), Expect = 9.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 100 KPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQS 219
+ + S T++ H G + ++K+RR DR R+ + S
Sbjct: 744 RDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSS 783
>AF111109-1|AAF21936.1| 975|Homo sapiens Ran binding protein 11
protein.
Length = 975
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 269 PTLYHPLCNFLSDNPKILRNRTTGSLKL 352
P LY +CN L D ++R T +LKL
Sbjct: 514 PMLYEAICNLLQDQDLVVRIETATTLKL 541
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.307 0.124 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,257,749
Number of Sequences: 237096
Number of extensions: 2078950
Number of successful extensions: 4755
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4660
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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