Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8l09
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical ... 36 0.031
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 35 0.040
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 31 0.87
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 31 0.87
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 31 0.87
AF068709-3|AAC19254.1| 332|Caenorhabditis elegans Serpentine re... 31 0.87
AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical... 31 0.87
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 30 1.2
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81096-2|CAB03162.1| 264|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 29 2.7
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 29 2.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.5
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 6.1
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 6.1
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 6.1
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.1
U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical pr... 28 6.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 6.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 6.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 6.1
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical
protein F41B4.1 protein.
Length = 342
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 498 SENEPSTKYGSKSENGLRSEYG-SRSEHGSRSECGTGSEYG 617
S + S YGS + N S+YG S+S++GS S GTGS YG
Sbjct: 234 SYHPTSVTYGSSNAN---SQYGGSQSQYGSMSNVGTGSTYG 271
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 35.1 bits (77), Expect = 0.040
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S G S+NE ++ G +S+NG S+ G S++G + G S+ G
Sbjct: 309 GEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNG 357
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S G S+NE ++ G +S+NG G S++G S+ G S+ G
Sbjct: 195 GEASDNGEESDNEEASDNGEESDNGEERGNGEASDNGDESDNGEASDNG 243
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S G S+NE ++ G +S+NG S+ G +G S+ G S+ G
Sbjct: 237 GEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGDESDNG 285
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S G S+NE ++ G +S+NG S+ G S++ S+ G S+ G
Sbjct: 285 GEASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEESDNG 333
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 483 KYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
K G S+NE + G S+NG S+ G S++ S+ G S+ G
Sbjct: 157 KCGEESDNEIESDNGEASDNGEESDNGEESDNEEASDNGEASDNG 201
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 489 GPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S+N + G S+NG S+ S++G S+ G S+ G
Sbjct: 273 GEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASDNG 315
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECG 599
G S G S+NE ++ G S+NG S+ S++G S+ G
Sbjct: 177 GEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNG 219
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 480 SKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
S G S+N ++ G +S+N S+ G S++G S+ G S+ G
Sbjct: 300 SDNGEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNG 345
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 480 SKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECG 599
S G S+N ++ G +S+NG + G S++G SE G
Sbjct: 324 SDNGEESDNGEASDNGEESDNGEERDNGEASDNGEESENG 363
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 498 SENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
S+N + G S+NG S+ G ++G S+ G SE G
Sbjct: 324 SDNGEESDNGEASDNGEESDNGEERDNGEASDNGEESENG 363
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 489 GPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S+N + G S+NG S+ S++G S+ G S+ G
Sbjct: 225 GEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNG 267
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S G S+N G S+NG S+ G S++G S+ S+ G
Sbjct: 255 GEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNG 303
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSE 611
G S G S+N ++ G +S+N S+ G S++G S+ G S+
Sbjct: 273 GEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESD 319
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 480 SKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
S G S+N G S+NG S+ G S++G S+ S+ G
Sbjct: 210 SDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNG 255
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
G S G S+N + S+NG S+ G S++G S+ G + G
Sbjct: 303 GEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNG 351
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 480 SKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGSEYG 617
S G S+N + G +S+N S+ G S++G S+ S+ G
Sbjct: 168 SDNGEASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNG 213
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 471 GVWSKYGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECG 599
G S G S+N ++ G +S+N S+ G S++G S+ G
Sbjct: 225 GEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNG 267
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 88 EAVKKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVR 243
E K+ EK+ E + +R ++ REK ++ + R + + TPV++R
Sbjct: 237 EREKEREKEREKEREKQKEREKEREKEREKEKKREEEARRKKEEASTPVIIR 288
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 30.7 bits (66), Expect = 0.87
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = +1
Query: 94 VKKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTN 273
VKK +D +SDS+ D G K A+ TPV + ES + +++
Sbjct: 72 VKKMAAKDSSDSDSS-------DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSD 124
Query: 274 SIPSLMQFPVRQPKDSEEQDNWKSKTDGDSD 366
+ P+ PV++P + Q S +D DSD
Sbjct: 125 A-PAKKLTPVKKPAQTPAQKKAASSSDSDSD 154
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 30.7 bits (66), Expect = 0.87
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = +1
Query: 94 VKKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTN 273
VKK +D +SDS+ D G K A+ TPV + ES + +++
Sbjct: 72 VKKMAAKDSSDSDSS-------DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSD 124
Query: 274 SIPSLMQFPVRQPKDSEEQDNWKSKTDGDSD 366
+ P+ PV++P + Q S +D DSD
Sbjct: 125 A-PAKKLTPVKKPAQTPAQKKAASSSDSDSD 154
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 30.7 bits (66), Expect = 0.87
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTD-RGRNRAQSPITPVV-----VRRESVD 258
K P + +++ ++S ++ E + + T R N ++S +P + R S
Sbjct: 289 KTPIQHNKNRTESRLHQKEKSSSDEEVHEKSTSSRHSNVSRSSKSPYLNDDRAPSRGSKC 348
Query: 259 NINTNSIPSLMQFPVRQPKDSEEQDNWKSKTDGDSDSNSEQGNM 390
+ +S P L+ + KDS++ DNWK+ S S+ M
Sbjct: 349 TSSHHSTPKLLTPSPQYLKDSDDDDNWKNSIPFMSSSDGAGAGM 392
>AF068709-3|AAC19254.1| 332|Caenorhabditis elegans Serpentine
receptor, class t protein28 protein.
Length = 332
Score = 30.7 bits (66), Expect = 0.87
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 248 NLLTI*IPTL-YHPLCNFLSDNPKILRNRTTGSLKLMETQILTQNKEICIQAQMDHAQCL 424
NLL + I L Y LC L + ++ + T +K M QI Q+ IC Q +
Sbjct: 205 NLLVVGITCLLYTSLCCVLGEKFNMIEDTTNSKMKNMSLQIFFQSALICAINQ------V 258
Query: 425 LQVLWDLI*FAPFPIW 472
+++ ++ F P+W
Sbjct: 259 ASIIYVIMNFVDVPLW 274
>AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical
protein Y71F9AL.4 protein.
Length = 557
Score = 30.7 bits (66), Expect = 0.87
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +1
Query: 106 EKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNI-NTNSIP 282
EK + +NT R S G+++ + + P+ R+ SV+ I N + P
Sbjct: 51 EKVNMKIGPANTPRGKSKPTGKKRDEKRKSVSKEEDDEKPAPLE-RQRSVEQIANMENTP 109
Query: 283 -SLMQFPVR--QPKDSEEQDNWKSKTDGDSDSNSEQGNM 390
S+++ P +PK S E+D K D D D SE+ ++
Sbjct: 110 ESVLKPPDNNGKPKPSHEKDAKVKKNDDDDDLGSEKKDL 148
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +1
Query: 121 DNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTNSIPSLMQFP 300
DN +S R +GDR E R + A S + P RR + TN +
Sbjct: 1622 DNRESMEDERSAGDRASESQETLRIRHDSTATSTV-PTPRRRRLLSGNTTNDTNEDNEER 1680
Query: 301 VRQPK--DSEEQDNWKSKTDGDSDSNSEQ 381
QP+ D E + D D D + E+
Sbjct: 1681 NGQPREFDGESSSSDDDNDDDDDDDDEEE 1709
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +1
Query: 121 DNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTNSIPSLMQFP 300
DN +S R +GDR E R + A S + P RR + TN +
Sbjct: 1622 DNRESMEDERSAGDRASESQETLRIRHDSTATSTV-PTPRRRRLLSGNTTNDTNEDNEER 1680
Query: 301 VRQPK--DSEEQDNWKSKTDGDSDSNSEQ 381
QP+ D E + D D D + E+
Sbjct: 1681 NGQPREFDGESSSSDDDNDDDDDDDDEEE 1709
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.5
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Frame = +1
Query: 94 VKKPEKQDEDNSDSNTQ----RRHSGDRGREKYRRWTDRGRN---RAQ-SPITPVVVRRE 249
+KKP+K+ ED + H ++ +E++ D RA+ +P +P + RR
Sbjct: 214 IKKPKKKPEDLERRRHRVKKTEEHEEEKDKEEHHESNDENMEFDTRARGAPSSPKLTRRA 273
Query: 250 SVDNINTNSIPSLMQFPVRQPKDSEEQDNWKSKTDGDSDSNSEQ 381
+ + + L + P E DN S+ DGD DS+ E+
Sbjct: 274 KRSESSDDEV-ELQKTP-------EIDDNKPSRKDGDHDSDMEE 309
>Z81096-2|CAB03162.1| 264|Caenorhabditis elegans Hypothetical
protein K03H4.2 protein.
Length = 264
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 190 TDRGRNRAQSPITPVVVRRESVDNINTNSIPSLMQFP 300
+D GR R+ + ITP + E+ DN+ IP + P
Sbjct: 103 SDTGRRRSVNLITPSPIPEETEDNLTETPIPVVEHIP 139
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 103 PEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNR 210
PE +DE D + S +R RE +R+ ++ R+R
Sbjct: 117 PESEDEKEKDRRKMHKTSRERDRESHRKRSNSPRDR 152
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 103 PEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNR 210
PE +DE D + S +R RE +R+ ++ R+R
Sbjct: 243 PESEDEKEKDRRKMHKTSRERDRESHRKRSNSPRDR 278
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSP 222
KK K+ + + + + +RR S R R R +R R R++SP
Sbjct: 77 KKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSP 118
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 97 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSP 222
KK K+ + + + + +RR S R R R +R R R++SP
Sbjct: 77 KKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSP 118
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 173 VEHHTNQEDQENNASGSDSSSDSDSEEGS 201
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 464 VEHHTNQEDQENNASGSDSSSDSDSEEGS 492
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 479 VEHHTNQEDQENNASGSDSSSDSDSEEGS 507
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 479 VEHHTNQEDQENNASGSDSSSDSDSEEGS 507
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 173 VEHHTNQEDQENNASGSDSSSDSDSEEGS 201
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 464 VEHHTNQEDQENNASGSDSSSDSDSEEGS 492
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 479 VEHHTNQEDQENNASGSDSSSDSDSEEGS 507
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 301 VRQPKDSEEQDNWKSKTDGDSDSNSEQGN 387
V + E+Q+N S +D SDS+SE+G+
Sbjct: 479 VEHHTNQEDQENNASGSDSSSDSDSEEGS 507
>U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical
protein C16A3.6 protein.
Length = 323
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 316 DSEEQDNWKSKTD-GDSDSNSEQG 384
DSE +DNW+ + + DSD + E+G
Sbjct: 243 DSENEDNWQPEQEQEDSDEDDEEG 266
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +1
Query: 115 DEDNSDS--NTQRRHSGDRGREKYRRWTDRGRNR-----AQSPITPVVVR-RESVDNINT 270
DE+N D N + R +Y+R + R +Q PV R R+S D++ T
Sbjct: 822 DENNRDRLYNPNDLNRNGSSRSRYQRAKNEKARRDFYHSSQDSADPVTERFRKSTDDLTT 881
Query: 271 NSIPSLMQFPVRQPKDSEEQDNWKSKTDG 357
S P +++ DSE + ++TDG
Sbjct: 882 RSRPEYRGPLLQKFHDSEFRTTALNETDG 910
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +1
Query: 115 DEDNSDS--NTQRRHSGDRGREKYRRWTDRGRNR-----AQSPITPVVVR-RESVDNINT 270
DE+N D N + R +Y+R + R +Q PV R R+S D++ T
Sbjct: 822 DENNRDRLYNPNDLNRNGSSRSRYQRAKNEKARRDFYHSSQDSADPVTERFRKSTDDLTT 881
Query: 271 NSIPSLMQFPVRQPKDSEEQDNWKSKTDG 357
S P +++ DSE + ++TDG
Sbjct: 882 RSRPEYRGPLLQKFHDSEFRTTALNETDG 910
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +1
Query: 115 DEDNSDS--NTQRRHSGDRGREKYRRWTDRGRNR-----AQSPITPVVVR-RESVDNINT 270
DE+N D N + R +Y+R + R +Q PV R R+S D++ T
Sbjct: 822 DENNRDRLYNPNDLNRNGSSRSRYQRAKNEKARRDFYHSSQDSADPVTERFRKSTDDLTT 881
Query: 271 NSIPSLMQFPVRQPKDSEEQDNWKSKTDG 357
S P +++ DSE + ++TDG
Sbjct: 882 RSRPEYRGPLLQKFHDSEFRTTALNETDG 910
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 486 YGPGSENEPSTKYGSKSENGLRSEYGSRSEHGSRSECGTGS 608
YG G N P +YG+ +N +G G + G G+
Sbjct: 52 YGNGGYNGPQAQYGNAGQNQPSGPFGGAGYTGPTAGTGFGN 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.307 0.124 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,780,225
Number of Sequences: 27780
Number of extensions: 290945
Number of successful extensions: 953
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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