Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8k22
(547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 34 0.37
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 34 0.37
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 34 0.37
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 34 0.37
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 34 0.37
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 34 0.37
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 34 0.37
BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open read... 31 2.6
BC006131-1|AAH06131.1| 581|Homo sapiens chromosome 10 open read... 31 2.6
AL139243-4|CAI14149.1| 581|Homo sapiens chromosome 10 open read... 31 2.6
AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein. 31 2.6
AK075265-1|BAC11507.1| 581|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens ... 31 2.6
D31765-1|BAA06543.1| 903|Homo sapiens KIAA0061 protein. 31 3.5
BC011529-1|AAH11529.1| 1024|Homo sapiens processing of precursor... 31 3.5
BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein. 30 4.6
BC066643-1|AAH66643.1| 1202|Homo sapiens CASK interacting protei... 30 6.1
BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein. 30 6.1
AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein p... 30 6.1
AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein p... 30 6.1
AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein p... 30 6.1
AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein p... 30 6.1
AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein p... 30 6.1
AF451976-1|AAL49757.1| 1202|Homo sapiens cask-interacting protei... 30 6.1
AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A... 30 6.1
AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein. 30 6.1
AB032965-1|BAA86453.1| 1124|Homo sapiens KIAA1139 protein protein. 30 6.1
U15177-1|AAA75509.1| 404|Homo sapiens unknown protein. 29 8.0
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQR--VAPAPPPLRHAVPQAPQARRCTY 342
P R P PR +++R P +R +P PPP R A P P RR ++
Sbjct: 584 PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 637
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHP-----EPRDAGAGVRQRVLARPLAQRVAPAPPPLRH 303
Q S T R SP L P E R R RP A + + +PPP+R
Sbjct: 643 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR 702
Query: 304 AVPQAPQARR 333
+PQ R+
Sbjct: 703 GASSSPQRRQ 712
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRH-AVPQAPQARRCT 339
P R P P R + P+ +R +P+PPP R A P P RR +
Sbjct: 575 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 626
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQR--VAPAPPPLRHAVPQAPQARRCTY 342
P R P PR +++R P +R +P PPP R A P P RR ++
Sbjct: 584 PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 637
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHP-----EPRDAGAGVRQRVLARPLAQRVAPAPPPLRH 303
Q S T R SP L P E R R RP A + + +PPP+R
Sbjct: 643 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR 702
Query: 304 AVPQAPQARR 333
+PQ R+
Sbjct: 703 GASSSPQRRQ 712
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRH-AVPQAPQARRCT 339
P R P P R + P+ +R +P+PPP R A P P RR +
Sbjct: 575 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 626
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQR--VAPAPPPLRHAVPQAPQARRCTY 342
P R P PR +++R P +R +P PPP R A P P RR ++
Sbjct: 593 PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 646
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHP-----EPRDAGAGVRQRVLARPLAQRVAPAPPPLRH 303
Q S T R SP L P E R R RP A + + +PPP+R
Sbjct: 652 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR 711
Query: 304 AVPQAPQARR 333
+PQ R+
Sbjct: 712 GASSSPQRRQ 721
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRH-AVPQAPQARRCT 339
P R P P R + P+ +R +P+PPP R A P P RR +
Sbjct: 584 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 635
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQR--VAPAPPPLRHAVPQAPQARRCTY 342
P R P PR +++R P +R +P PPP R A P P RR ++
Sbjct: 584 PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 637
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHP-----EPRDAGAGVRQRVLARPLAQRVAPAPPPLRH 303
Q S T R SP L P E R R RP A + + +PPP+R
Sbjct: 643 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR 702
Query: 304 AVPQAPQARR 333
+PQ R+
Sbjct: 703 GASSSPQRRQ 712
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRH-AVPQAPQARRCT 339
P R P P R + P+ +R +P+PPP R A P P RR +
Sbjct: 575 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 626
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQR--VAPAPPPLRHAVPQAPQARRCTY 342
P R P PR +++R P +R +P PPP R A P P RR ++
Sbjct: 593 PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 646
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHP-----EPRDAGAGVRQRVLARPLAQRVAPAPPPLRH 303
Q S T R SP L P E R R RP A + + +PPP+R
Sbjct: 652 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR 711
Query: 304 AVPQAPQARR 333
+PQ R+
Sbjct: 712 GASSSPQRRQ 721
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRH-AVPQAPQARRCT 339
P R P P R + P+ +R +P+PPP R A P P RR +
Sbjct: 584 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 635
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQR--VAPAPPPLRHAVPQAPQARRCTY 342
P R P PR +++R P +R +P PPP R A P P RR ++
Sbjct: 582 PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 635
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHP-----EPRDAGAGVRQRVLARPLAQRVAPAPPPLRH 303
Q S T R SP L P E R R RP A + + +PPP+R
Sbjct: 641 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR 700
Query: 304 AVPQAPQARR 333
+PQ R+
Sbjct: 701 GASSSPQRRQ 710
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRH-AVPQAPQARRCT 339
P R P P R + P+ +R +P+PPP R A P P RR +
Sbjct: 573 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 624
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQR--VAPAPPPLRHAVPQAPQARRCTY 342
P R P PR +++R P +R +P PPP R A P P RR ++
Sbjct: 582 PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 635
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHP-----EPRDAGAGVRQRVLARPLAQRVAPAPPPLRH 303
Q S T R SP L P E R R RP A + + +PPP+R
Sbjct: 641 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR 700
Query: 304 AVPQAPQARR 333
+PQ R+
Sbjct: 701 GASSSPQRRQ 710
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRH-AVPQAPQARRCT 339
P R P P R + P+ +R +P+PPP R A P P RR +
Sbjct: 573 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 624
>BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open reading
frame 95 protein.
Length = 257
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +1
Query: 166 WSPVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
W P+ YP + P AG G R RP A PP RH P+ P
Sbjct: 72 WPPLCCYPQS---RPTASAAGPGACMRASGRPHGNTTASTAPP-RHPRPRRP 119
>BC006131-1|AAH06131.1| 581|Homo sapiens chromosome 10 open reading
frame 33 protein.
Length = 581
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 250 GLVAEHLLQHHGAR-GVHGQRRDIGGLGTTDELLPGNSASR 131
GLVA LQ G V +R IGG T+E++PG SR
Sbjct: 46 GLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSR 86
>AL139243-4|CAI14149.1| 581|Homo sapiens chromosome 10 open reading
frame 33 protein.
Length = 581
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 250 GLVAEHLLQHHGAR-GVHGQRRDIGGLGTTDELLPGNSASR 131
GLVA LQ G V +R IGG T+E++PG SR
Sbjct: 46 GLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSR 86
>AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein.
Length = 257
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +1
Query: 166 WSPVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
W P+ YP + P AG G R RP A PP RH P+ P
Sbjct: 72 WPPLCCYPQS---RPTASAAGPGACMRASGRPHGNTTASTAPP-RHPRPRRP 119
>AK075265-1|BAC11507.1| 581|Homo sapiens protein ( Homo sapiens
cDNA FLJ90784 fis, clone THYRO1001456. ).
Length = 581
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 250 GLVAEHLLQHHGAR-GVHGQRRDIGGLGTTDELLPGNSASR 131
GLVA LQ G V +R IGG T+E++PG SR
Sbjct: 46 GLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSR 86
>AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ14280 fis, clone PLACE1005584, weakly similar to
TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0. ).
Length = 257
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +1
Query: 166 WSPVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
W P+ YP + P AG G R RP A PP RH P+ P
Sbjct: 72 WPPLCCYPQS---RPTASAAGPGACMRASGRPHGNTTASTAPP-RHPRPRRP 119
>D31765-1|BAA06543.1| 903|Homo sapiens KIAA0061 protein.
Length = 903
Score = 30.7 bits (66), Expect = 3.5
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 104 ADVPMPRGFSTCRVPRKQLIGGPQSSNIPTLTVDTPSPVMLEQVFG 241
+D + R S VP QLI GP S IP L + P V E G
Sbjct: 447 SDQDLNRMRSELLVPGSQLILGPHESKIPILLIQQPGKVTGEDRLG 492
>BC011529-1|AAH11529.1| 1024|Homo sapiens processing of precursor 1,
ribonuclease P/MRP subunit (S. cerevisiae) protein.
Length = 1024
Score = 30.7 bits (66), Expect = 3.5
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 104 ADVPMPRGFSTCRVPRKQLIGGPQSSNIPTLTVDTPSPVMLEQVFG 241
+D + R S VP QLI GP S IP L + P V E G
Sbjct: 568 SDQDLNRMRSELLVPGSQLILGPHESKIPILLIQQPGKVTGEDRLG 613
>BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein.
Length = 1098
Score = 30.3 bits (65), Expect = 4.6
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 175 VLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
+L P RG P P AG G + +R L QR P+P PL ++ + RC +V
Sbjct: 9 LLSPPPTPRGSPRPPTAGPGCPIPLASRAL-QR-GPSPGPLSPSLLSNSPSGRCHHV 63
>BC066643-1|AAH66643.1| 1202|Homo sapiens CASK interacting protein 2
protein.
Length = 1202
Score = 29.9 bits (64), Expect = 6.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 172 PVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPP 291
P + P D G P P++ G R+R L+ P P PP
Sbjct: 882 PSPEPPPLD-GSPGPKEGATGPRRRTLSEPAGPSEPPGPP 920
>BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein.
Length = 443
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 160 HRWSPVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQA 318
HR + LQ P + GHP+ + R L+ P +Q + PPL PQA
Sbjct: 46 HRPACSLQSPSSAGGHPKAHELSEAC-LRTLSAPPSQPPSLGEPPLHPPPPQA 97
>AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 178 LQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
L P RG P P AG G + +R L QR P+P PL ++ + RC +V
Sbjct: 33 LSPPPTPRGSPRPPTAGPGCPIPLASRAL-QR-GPSPGPLSPSLLSNSPSGRCHHV 86
>AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 178 LQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
L P RG P P AG G + +R L QR P+P PL ++ + RC +V
Sbjct: 33 LSPPPTPRGSPRPPTAGPGCPIPLASRAL-QR-GPSPGPLSPSLLSNSPSGRCHHV 86
>AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 178 LQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
L P RG P P AG G + +R L QR P+P PL ++ + RC +V
Sbjct: 33 LSPPPTPRGSPRPPTAGPGCPIPLASRAL-QR-GPSPGPLSPSLLSNSPSGRCHHV 86
>AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 178 LQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
L P RG P P AG G + +R L QR P+P PL ++ + RC +V
Sbjct: 33 LSPPPTPRGSPRPPTAGPGCPIPLASRAL-QR-GPSPGPLSPSLLSNSPSGRCHHV 86
>AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 178 LQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
L P RG P P AG G + +R L QR P+P PL ++ + RC +V
Sbjct: 33 LSPPPTPRGSPRPPTAGPGCPIPLASRAL-QR-GPSPGPLSPSLLSNSPSGRCHHV 86
>AF451976-1|AAL49757.1| 1202|Homo sapiens cask-interacting protein 2
protein.
Length = 1202
Score = 29.9 bits (64), Expect = 6.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 172 PVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPP 291
P + P D G P P++ G R+R L+ P P PP
Sbjct: 882 PSPEPPPLD-GSPGPKEGATGPRRRTLSEPAGPSEPPGPP 920
>AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A2LP
protein.
Length = 1051
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 178 LQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
L P RG P P AG G + +R L QR P+P PL ++ + RC +V
Sbjct: 33 LSPPPTPRGSPRPPTAGPGCPIPLASRAL-QR-GPSPGPLSPSLLSNSPSGRCHHV 86
>AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein.
Length = 443
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 160 HRWSPVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQA 318
HR + LQ P + GHP+ + R L+ P +Q + PPL PQA
Sbjct: 46 HRPACSLQSPSSAGGHPKAHELSEAC-LRTLSAPPSQPPSLGEPPLHPPPPQA 97
>AB032965-1|BAA86453.1| 1124|Homo sapiens KIAA1139 protein protein.
Length = 1124
Score = 29.9 bits (64), Expect = 6.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 172 PVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPP 291
P + P D G P P++ G R+R L+ P P PP
Sbjct: 804 PSPEPPPLD-GSPGPKEGATGPRRRTLSEPAGPSEPPGPP 842
>U15177-1|AAA75509.1| 404|Homo sapiens unknown protein.
Length = 404
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 208 PEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARRCTYV 345
P PR AGA A + AP P R + P P R CT++
Sbjct: 93 PPPRPAGATRTGAPPAEGRRHKAAPHNGPARRSPPCNPAPRSCTHI 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,520,155
Number of Sequences: 237096
Number of extensions: 1668168
Number of successful extensions: 6205
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6174
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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